ID |
Definition |
Evalue |
posQ/posS |
PF04492.12 |
Bacteriophage replication protein O |
9.9E-08 |
21-71 / 25-82 |
PF13463.5 |
Winged helix DNA-binding domain |
5.6E-07 |
27-71 / 7-50 |
PF03965.15 |
Penicillinase repressor |
7.3E-07 |
25-72 / 5-57 |
PF02319.19 |
E2F/DP family winged-helix DNA-binding domain |
8.3E-07 |
27-71 / 11-56 |
PF10007.8 |
Uncharacterized protein conserved in archaea (DUF2250) |
8.8E-07 |
23-71 / 8-55 |
PF04079.15 |
Segregation and condensation complex subunit ScpB |
9.4E-07 |
22-73 / 82-129 |
PF05584.10 |
Sulfolobus plasmid regulatory protein |
1.1E-06 |
28-72 / 10-52 |
PF14277.5 |
Domain of unknown function (DUF4364) |
1.2E-06 |
28-71 / 5-52 |
PF07106.12 |
Tat binding protein 1(TBP-1)-interacting protein (TBPIP) |
1.3E-06 |
27-71 / 5-51 |
PF07381.10 |
Winged helix DNA-binding domain (DUF1495) |
1.3E-06 |
24-71 / 10-67 |
PF16221.4 |
winged helix-turn-helix |
2.1E-06 |
26-69 / 34-77 |
PF14557.5 |
Putative AphA-like transcriptional regulator |
2.7E-06 |
37-72 / 24-67 |
PF02295.16 |
Adenosine deaminase z-alpha domain |
2.8E-06 |
27-71 / 8-52 |
PF08221.10 |
RNA polymerase III subunit RPC82 helix-turn-helix domain |
3.2E-06 |
22-71 / 12-60 |
PF01978.18 |
Sugar-specific transcriptional regulator TrmB |
3.4E-06 |
26-71 / 11-55 |
PF10771.8 |
Winged helix-turn-helix domain (DUF2582) |
3.4E-06 |
22-71 / 7-55 |
PF12793.6 |
Sugar transport-related sRNA regulator N-term |
4.1E-06 |
37-71 / 17-51 |
PF13601.5 |
Winged helix DNA-binding domain |
4.6E-06 |
37-71 / 13-47 |
PF01475.18 |
Ferric uptake regulator family |
6.1E-06 |
23-71 / 7-60 |
PF03551.13 |
Transcriptional regulator PadR-like family |
6.3E-06 |
37-72 / 13-50 |
PF01638.16 |
HxlR-like helix-turn-helix |
6.7E-06 |
27-71 / 9-53 |
PF08222.10 |
CodY helix-turn-helix domain |
7.6E-06 |
37-71 / 3-37 |
PF04358.12 |
DsrC like protein |
8.6E-06 |
20-71 / 36-94 |
PF09012.9 |
FeoC like transcriptional regulator |
9.1E-06 |
37-72 / 13-48 |
PF14394.5 |
Domain of unknown function (DUF4423) |
9.5E-06 |
25-71 / 23-71 |
PF06163.10 |
Bacterial protein of unknown function (DUF977) |
1.1E-05 |
25-71 / 14-59 |
PF01726.15 |
LexA DNA binding domain |
1.5E-05 |
38-71 / 25-59 |
PF02002.16 |
TFIIE alpha subunit |
1.6E-05 |
25-71 / 14-59 |
PF08784.10 |
Replication protein A C terminal |
1.9E-05 |
24-71 / 41-94 |
PF09202.10 |
Rio2, N-terminal |
2.1E-05 |
37-71 / 23-57 |
PF12802.6 |
MarR family |
2.2E-05 |
39-71 / 22-54 |
PF09904.8 |
Winged helix-turn helix |
2.2E-05 |
28-70 / 12-53 |
PF09114.9 |
Transcription factor MotA, activation domain |
2.3E-05 |
21-71 / 14-64 |
PF14947.5 |
Winged helix-turn-helix |
2.4E-05 |
28-71 / 7-49 |
PF09339.9 |
IclR helix-turn-helix domain |
2.6E-05 |
39-70 / 19-50 |
PF07848.11 |
PaaX-like protein |
2.6E-05 |
37-71 / 19-56 |
PF11313.7 |
Protein of unknown function (DUF3116) |
2.7E-05 |
39-72 / 21-61 |
PF05158.11 |
RNA polymerase Rpc34 subunit |
0.0018 |
22-71 / 12-67 |
PF03428.12 |
Replication protein C N-terminal domain |
3E-05 |
39-71 / 71-104 |
PF13412.5 |
Winged helix-turn-helix DNA-binding |
3.9E-05 |
38-68 / 17-47 |
PF01047.21 |
MarR family |
4E-05 |
37-71 / 16-50 |
PF08679.10 |
Dissimilatory sulfite reductase D (DsrD) |
3.7E-05 |
37-84 / 15-60 |
PF09182.9 |
Bacterial purine repressor, N-terminal |
4.1E-05 |
27-70 / 8-57 |
PF10711.8 |
Hypothetical protein (DUF2513) |
4.4E-05 |
38-72 / 18-56 |
PF16365.4 |
Ethanolamine utilization protein EutK C-terminus |
5E-05 |
37-71 / 16-50 |
PF01022.19 |
Bacterial regulatory protein, arsR family |
5.6E-05 |
37-68 / 15-46 |
PF04703.11 |
FaeA-like protein |
5.9E-05 |
37-71 / 13-47 |
PF04182.11 |
B-block binding subunit of TFIIIC |
6.2E-05 |
37-71 / 17-51 |
PF01090.18 |
Ribosomal protein S19e |
6.1E-05 |
28-71 / 56-113 |
PF02082.19 |
Transcriptional regulator |
8.1E-05 |
39-71 / 25-57 |
PF02334.15 |
Replication terminator protein |
8E-05 |
38-72 / 31-74 |
PF14502.5 |
Helix-turn-helix domain |
9.5E-05 |
38-71 / 6-39 |
PF03444.14 |
Winged helix-turn-helix transcription repressor, HrcA DNA-binding |
0.0001 |
37-71 / 23-57 |
PF05732.10 |
Firmicute plasmid replication protein (RepL) |
0.00011 |
23-71 / 55-108 |
PF12840.6 |
Helix-turn-helix domain |
0.00016 |
25-71 / 10-53 |
PF09639.9 |
YjcQ protein |
0.00016 |
37-71 / 15-51 |
PF05331.10 |
Protein of unknown function (DUF742) |
0.00017 |
19-71 / 37-86 |
PF09824.8 |
ArsR transcriptional regulator |
0.00018 |
23-71 / 17-61 |
PF03297.14 |
S25 ribosomal protein |
0.00019 |
37-71 / 55-89 |
PF06969.15 |
HemN C-terminal domain |
0.00021 |
37-71 / 19-54 |
PF00392.20 |
Bacterial regulatory proteins, gntR family |
0.00021 |
37-71 / 22-57 |
PF05491.12 |
Holliday junction DNA helicase ruvB C-terminus |
0.00022 |
37-71 / 24-59 |
PF16864.4 |
Dimerisation domain |
0.00022 |
26-71 / 21-65 |
PF01418.16 |
Helix-turn-helix domain, rpiR family |
0.00022 |
20-71 / 13-67 |
PF08220.11 |
DeoR-like helix-turn-helix domain |
0.00025 |
37-71 / 13-47 |
PF15977.4 |
Winged helix-turn-helix DNA binding |
0.00029 |
38-71 / 23-56 |
PF01325.18 |
Iron dependent repressor, N-terminal DNA binding domain |
0.0003 |
37-71 / 20-54 |
PF11972.7 |
HTH DNA binding domain |
0.00032 |
37-68 / 12-40 |
PF09397.9 |
Ftsk gamma domain |
0.00037 |
37-71 / 18-52 |
PF08279.11 |
HTH domain |
0.0005 |
37-66 / 14-43 |
PF08461.9 |
Ribonuclease R winged-helix domain |
0.0005 |
38-71 / 12-50 |
PF07183.10 |
Protein of unknown function (DUF1403) |
0.00053 |
26-71 / 277-319 |
PF13545.5 |
Crp-like helix-turn-helix domain |
0.00056 |
37-71 / 26-60 |
PF09756.8 |
DDRGK domain |
0.00085 |
29-71 / 107-148 |
PF11994.7 |
Protein of unknown function (DUF3489) |
0.00089 |
27-66 / 11-49 |
PF13730.5 |
Helix-turn-helix domain |
0.0012 |
49-68 / 33-52 |
PF00325.19 |
Bacterial regulatory proteins, crp family |
0.0014 |
42-66 / 6-30 |
PF07900.10 |
Protein of unknown function (DUF1670) |
0.0015 |
37-71 / 94-128 |
PF09681.9 |
N-terminal phage replisome organiser (Phage_rep_org_N) |
0.0018 |
39-71 / 54-86 |
PF06970.10 |
Replication initiator protein A (RepA) N-terminus |
0.0023 |
40-62 / 53-75 |
PF13404.5 |
AsnC-type helix-turn-helix domain |
0.0027 |
38-62 / 17-41 |
PF05043.12 |
Mga helix-turn-helix domain |
0.0034 |
27-65 / 20-57 |
PF17443.1 |
Uncharacterized protein pXO2-72 |
0.0039 |
37-71 / 7-50 |
PF00126.26 |
Bacterial regulatory helix-turn-helix protein, lysR family |
0.0047 |
40-71 / 13-47 |
PF08535.9 |
KorB domain |
0.0051 |
39-70 / 4-35 |
PF16509.4 |
TrfB plasmid transcriptional repressor |
0.0055 |
18-70 / 13-62 |
PF14338.5 |
Mrr N-terminal domain |
0.0055 |
50-71 / 49-70 |
PF09107.10 |
Elongation factor SelB, winged helix |
0.0064 |
37-71 / 7-41 |
PF12324.7 |
Helix-turn-helix domain of alkylmercury lyase |
0.0079 |
26-64 / 24-61 |
PF13635.5 |
Domain of unknown function (DUF4143) |
0.0087 |
26-71 / 17-65 |