phrog_3830 is made of 37 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
1029.16 1760 1038


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p169260 no NCBI prot ID no annotation VI_00445 Bacilli_gi_251833322 Viruses.
p186726 no NCBI prot ID no annotation VI_06215 Cyanobacteria_gi_553739909 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p225074 no NCBI prot ID no annotation VI_03999 Mollicutes_gi_162446888_614609_648901 Viruses.
p29865 no NCBI prot ID no annotation VI_06311 Epsilonproteobacteria_gi_544659823 Viruses.
KY661963_p7 ARB06712.1 type I restriction-modification system, restriction subunit R KY661963 Liberibacter phage P-JXGC-3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
p7193 no NCBI prot ID no annotation VI_06240 Deltaproteobacteria_gi_544815434 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p91525 no NCBI prot ID no annotation VI_12481 Thermoprotei_gi_483380609_2368826_2414990 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p124286 no NCBI prot ID no annotation VI_03965 Gammaproteobacteria_gi_590801178 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p2004 no NCBI prot ID no annotation VI_03288 Gammaproteobacteria_gi_556275227 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p30304 no NCBI prot ID no annotation VI_07939 Gammaproteobacteria_gi_419184717 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p5648 no NCBI prot ID no annotation VI_02379 Gammaproteobacteria_gi_476381527 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p29327 no NCBI prot ID no annotation VI_07936 Gammaproteobacteria_gi_419180698_355_67894 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p1960 no NCBI prot ID no annotation VI_01416 Gammaproteobacteria_gi_545165932 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p5454 no NCBI prot ID no annotation VI_01896 Gammaproteobacteria_gi_422830174 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p35689 no NCBI prot ID no annotation VI_03697 Gammaproteobacteria_gi_510915356_2273151_2335995 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p59645 no NCBI prot ID no annotation VI_03282 Gammaproteobacteria_gi_556196033 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p3762 no NCBI prot ID no annotation VI_06941 Gammaproteobacteria_gi_452322300 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p33205 no NCBI prot ID no annotation VI_12334 Spirochaetia_gi_477565433 Viruses.
p7612 no NCBI prot ID no annotation VI_01820 Gammaproteobacteria_gi_331655709 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p17726 no NCBI prot ID no annotation VI_02356 Gammaproteobacteria_gi_476381208 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p12185 no NCBI prot ID no annotation VI_03760 Gammaproteobacteria_gi_378975690_35748_122824 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p1575 no NCBI prot ID no annotation VI_11115 Gammaproteobacteria_gi_487670184 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p1716 no NCBI prot ID no annotation VI_11008 Gammaproteobacteria_gi_490091285 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p281913 no NCBI prot ID no annotation VI_07946 Gammaproteobacteria_gi_419194732 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p9900 no NCBI prot ID no annotation VI_03547 Gammaproteobacteria_gi_510899102 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p73252 no NCBI prot ID no annotation VI_08731 Gammaproteobacteria_gi_420388689 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p3555 no NCBI prot ID no annotation VI_02575 Gammaproteobacteria_gi_491276315 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p1458 no NCBI prot ID no annotation VI_03920 Gammaproteobacteria_gi_565643352 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p120906 no NCBI prot ID no annotation VI_07711 Gammaproteobacteria_gi_402295635 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p3394 no NCBI prot ID no annotation VI_03375 Gammaproteobacteria_gi_556579624 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus; Salmonella phage SSU5.
p586 no NCBI prot ID no annotation VI_03737 Gammaproteobacteria_gi_510925838 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p78146 no NCBI prot ID no annotation VI_07931 Gammaproteobacteria_gi_419167805 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p319527 no NCBI prot ID no annotation VI_03222 Gammaproteobacteria_gi_554133057 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p252318 no NCBI prot ID no annotation VI_06846 Gammaproteobacteria_gi_309797878 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p53309 no NCBI prot ID no annotation VI_04075 Zetaproteobacteria_gi_483101500 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p35691 no NCBI prot ID no annotation VI_03697 Gammaproteobacteria_gi_510915356_2273151_2335995 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p142888 no NCBI prot ID no annotation VI_04000 Negativicutes_gi_545446786 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2668 53 no annotation unknown function 26 4.07E-105 95.51
phrog_23661 3 no annotation unknown function 3 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_16259 DNA helicase DNA, RNA and nucleotide metabolism 96.7 1.3E-05 267-441 / 109-259
phrog_16694 no annotation unknown function 99.7 1.2E-22 130-723 / 133-695
phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 99.7 1E-20 270-709 / 1-318
phrog_2488 DNA helicase DNA, RNA and nucleotide metabolism 90.6 0.051 273-352 / 37-114
phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 98.2 2.1E-09 269-441 / 3-163
phrog_6819 Holliday junction branch migration helicase DNA, RNA and nucleotide metabolism 92.4 0.02 273-703 / 22-351
phrog_9690 DNA helicase DNA, RNA and nucleotide metabolism 95.7 0.00034 402-708 / 37-270

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF06862.11 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 1.8E-20 572-710 / 358-457
PF02399.14 Origin of replication binding protein 7.9E-17 572-710 / 282-380
PF04313.13 Type I restriction enzyme R protein N terminus (HSDR_N) 1.8E-15 31-215 / 2-213
PF14617.5 U3-containing 90S pre-ribosomal complex subunit 5.5E-10 288-464 / 64-232
PF00271.30 Helicase conserved C-terminal domain 3.4E-09 571-709 / 16-118
PF16203.4 ERCC3/RAD25/XPB C-terminal helicase 3.9E-09 572-727 / 60-178
PF11867.7 Domain of unknown function (DUF3387) 9.2E-09 798-1062 / 59-308
PF00270.28 DEAD/DEAH box helicase 3.4E-08 291-460 / 2-161
PF13872.5 P-loop containing NTP hydrolase pore-1 8.4E-08 287-460 / 34-225
PF00176.22 SNF2 family N-terminal domain 1.5E-07 292-463 / 1-197
PF07652.13 Flavivirus DEAD domain 2E-07 312-366 / 4-56
PF12340.7 Protein of unknown function (DUF3638) 2.9E-07 287-434 / 21-182
PF07517.13 SecA DEAD-like domain 3E-07 287-433 / 89-224
PF11496.7 Class II histone deacetylase complex subunits 2 and 3 1.6E-06 572-730 / 104-224
PF02562.15 PhoH-like protein 3E-06 288-359 / 4-65
PF13871.5 C-terminal domain on Strawberry notch homologue 9.2E-06 645-710 / 29-114
PF13086.5 AAA domain 9.4E-06 289-364 / 2-68
PF04851.14 Type III restriction enzyme, res subunit 1.1E-05 287-365 / 2-73
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 8.9E-05 1166-1236 / 5-80
PF13744.5 Helix-turn-helix domain 0.0004 1168-1232 / 15-79
PF05339.10 Protein of unknown function (DUF739) 0.00051 1173-1234 / 5-65
PF13307.5 Helicase C-terminal domain 0.00056 572-692 / 8-99
PF14590.5 Domain of unknown function (DUF4447) 0.00076 1171-1234 / 7-72
PF01381.21 Helix-turn-helix 0.00081 1178-1230 / 3-54
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 0.001 1176-1233 / 3-59
PF04466.12 Phage terminase large subunit 0.0012 314-367 / 3-58
PF13443.5 Cro/C1-type HTH DNA-binding domain 0.0014 1176-1234 / 2-62
PF13413.5 Helix-turn-helix domain 0.0014 1177-1229 / 2-59
PF04645.11 Protein of unknown function, DUF603 0.0016 1168-1233 / 4-68
PF12844.6 Helix-turn-helix domain 0.0021 1176-1233 / 4-60
PF13560.5 Helix-turn-helix domain 0.0026 1172-1231 / 2-63
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 0.0027 1172-1234 / 70-130
PF00580.20 UvrD/REP helicase N-terminal domain 0.0031 290-366 / 2-68
PF12008.7 Type I restriction and modification enzyme - subunit R C terminal 0.0035 795-884 / 33-128
PF05269.10 Bacteriophage CII protein 0.0035 1171-1238 / 8-74
PF05127.13 Helicase 0.0049 316-361 / 1-45
PF08667.9 BetR domain 0.0064 1170-1235 / 4-72
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 0.007 1179-1233 / 4-56

Annotations of the NCBI proteins of this PHROG


1:type I restriction-modification system, restriction subunit R

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K01153 hsdR : type I restriction enzyme, R subunit [EC:3.1.21.3] no pathways 1989 37

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0070823 HDA1 complex
GO:0006355 regulation of transcription, DNA-templated
GO:0016575 histone deacetylation
GO:0003676 nucleic acid binding
GO:0004519 endonuclease activity
GO:0043565 sequence-specific DNA binding
GO:0006139 nucleobase-containing compound metabolic process
GO:0016020 membrane
GO:0017038 protein import
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0045892 negative regulation of transcription, DNA-templated
GO:0003688 DNA replication origin binding
GO:0016787 hydrolase activity
GO:0006260 DNA replication
GO:0003677 DNA binding
GO:0008026 ATP-dependent helicase activity
GO:0006304 DNA modification

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