phrog_38492 is made of 2 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
69 69 69


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p38119 no NCBI prot ID no annotation VI_05808 Clostridia_gi_484142200 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p210668 no NCBI prot ID no annotation VI_06204 Clostridia_gi_565896634 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_9628 11 no annotation unknown function 2 1.36E-15 5.99

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10157 no annotation unknown function 91.5 0.034 22-68 / 89-135
phrog_34341 transcriptional regulator transcription regulation 90.5 0.052 32-64 / 74-106
phrog_351 RNA polymerase sigma factor transcription regulation 94.2 0.0042 21-68 / 170-220

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF08299.10 Bacterial dnaA protein helix-turn-helix 8.6E-11 2-64 / 4-67
PF03333.12 Adhesin biosynthesis transcription regulatory protein 1.8E-07 27-67 / 40-80
PF07638.10 ECF sigma factor 2E-07 27-68 / 134-175
PF05331.10 Protein of unknown function (DUF742) 4.4E-07 26-67 / 38-78
PF07374.10 Protein of unknown function (DUF1492) 4.6E-06 26-66 / 54-95
PF10654.8 Protein of unknown function (DUF2481) 6.2E-06 40-66 / 78-104
PF16509.4 TrfB plasmid transcriptional repressor 8.9E-06 31-65 / 20-54
PF06530.11 Phage antitermination protein Q 1E-05 28-66 / 65-103
PF04545.15 Sigma-70, region 4 1.2E-05 40-65 / 22-47
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 2.4E-05 32-65 / 13-46
PF08281.11 Sigma-70, region 4 3.1E-05 35-66 / 19-50
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 3E-05 28-66 / 19-57
PF16264.4 SatD family (SatD) 5.3E-05 28-66 / 152-195
PF02001.15 Protein of unknown function DUF134 6.1E-05 28-65 / 33-70
PF07750.10 GcrA cell cycle regulator 6.7E-05 39-65 / 15-42
PF13413.5 Helix-turn-helix domain 9E-05 40-65 / 7-32
PF08535.9 KorB domain 0.00011 42-65 / 3-26
PF01381.21 Helix-turn-helix 0.00012 40-65 / 7-32
PF12759.6 InsA C-terminal domain 0.00012 40-65 / 19-44
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.00012 41-65 / 12-36
PF06322.10 Phage NinH protein 0.00017 41-66 / 15-40
PF04936.11 Protein of unknown function (DUF658) 0.0081 41-65 / 87-111
PF08765.10 Mor transcription activator family 0.00018 41-66 / 71-96
PF05225.15 helix-turn-helix, Psq domain 0.00021 40-65 / 14-40
PF11242.7 Protein of unknown function (DUF2774) 0.00022 39-65 / 11-37
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00024 41-66 / 18-43
PF05344.10 Domain of Unknown Function (DUF746) 0.00024 41-65 / 11-35
PF04552.12 Sigma-54, DNA binding domain 0.00025 39-65 / 45-71
PF10975.7 Protein of unknown function (DUF2802) 0.00028 38-63 / 39-64
PF17443.1 Uncharacterized protein pXO2-72 0.00036 41-63 / 7-29
PF00356.20 Bacterial regulatory proteins, lacI family 0.00041 45-64 / 2-21
PF07141.10 Putative bacteriophage terminase small subunit 0.00041 40-65 / 29-54
PF02796.14 Helix-turn-helix domain of resolvase 0.00049 41-64 / 20-43
PF02954.18 Bacterial regulatory protein, Fis family 0.00058 41-64 / 15-38
PF00376.22 MerR family regulatory protein 0.00064 46-64 / 3-21
PF04218.12 CENP-B N-terminal DNA-binding domain 0.00065 42-66 / 23-47
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 0.00064 33-65 / 117-149
PF13411.5 MerR HTH family regulatory protein 0.0007 44-64 / 2-22
PF07453.12 NUMOD1 domain 0.00069 43-62 / 20-39
PF13936.5 Helix-turn-helix domain 0.00077 40-63 / 18-41
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 0.00076 43-64 / 4-25
PF13011.5 leucine-zipper of insertion element IS481 0.0008 40-65 / 22-47
PF07278.10 Protein of unknown function (DUF1441) 0.0008 43-64 / 2-23
PF02042.14 RWP-RK domain 0.00085 40-64 / 10-34
PF13591.5 MerR HTH family regulatory protein 0.00087 44-64 / 2-22
PF08822.10 Protein of unknown function (DUF1804) 0.00089 41-65 / 18-42
PF12116.7 Stage III sporulation protein D 0.00089 41-65 / 18-42
PF06806.11 Putative excisionase (DUF1233) 0.00087 43-64 / 10-31
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.00088 42-65 / 107-130
PF01371.18 Trp repressor protein 0.00097 39-66 / 45-72
PF04967.11 HTH DNA binding domain 0.001 43-66 / 24-47
PF13443.5 Cro/C1-type HTH DNA-binding domain 0.0011 44-62 / 13-31
PF00292.17 'Paired box' domain 0.0011 40-65 / 31-56
PF05339.10 Protein of unknown function (DUF739) 0.0013 42-63 / 16-37
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0013 42-65 / 12-35
PF04645.11 Protein of unknown function, DUF603 0.0013 34-65 / 12-46
PF01710.15 Transposase 0.0014 40-65 / 16-41
PF13412.5 Winged helix-turn-helix DNA-binding 0.0015 41-66 / 16-41
PF09607.9 Brinker DNA-binding domain 0.0015 43-65 / 26-48
PF14493.5 Helix-turn-helix domain 0.0015 41-65 / 11-35
PF07037.10 Putative transcription regulator (DUF1323) 0.0016 44-64 / 2-22
PF13744.5 Helix-turn-helix domain 0.0017 38-65 / 27-54
PF13309.5 HTH domain 0.0018 43-63 / 42-62
PF11427.7 Tc3 transposase 0.0021 41-65 / 19-43
PF16221.4 winged helix-turn-helix 0.0019 42-66 / 46-70
PF15978.4 Tn7-like transposition protein D 0.0019 41-65 / 202-226
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0019 41-65 / 22-46
PF13404.5 AsnC-type helix-turn-helix domain 0.0021 41-64 / 16-39
PF14590.5 Domain of unknown function (DUF4447) 0.0021 41-65 / 19-43
PF07506.10 RepB plasmid partitioning protein 0.0023 41-65 / 20-44
PF09035.9 Excisionase from transposon Tn916 0.0025 41-63 / 14-36
PF12728.6 Helix-turn-helix domain 0.003 44-63 / 3-23
PF10668.8 Phage terminase small subunit 0.003 42-65 / 22-45
PF12844.6 Helix-turn-helix domain 0.0035 45-56 / 15-26
PF14549.5 DNA-binding transcriptional regulator Cro 0.0034 44-60 / 11-27
PF04492.12 Bacteriophage replication protein O 0.0034 42-66 / 49-73
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0037 41-65 / 26-49
PF10743.8 Regulatory phage protein cox 0.0036 41-64 / 10-33
PF06971.12 Putative DNA-binding protein N-terminus 0.0038 42-62 / 27-47
PF00325.19 Bacterial regulatory proteins, crp family 0.0042 46-62 / 6-22
PF09862.8 Protein of unknown function (DUF2089) 0.0046 40-65 / 47-72
PF00196.18 Bacterial regulatory proteins, luxR family 0.0047 41-65 / 16-40
PF07471.11 Phage DNA packaging protein Nu1 0.0048 43-64 / 3-24
PF13560.5 Helix-turn-helix domain 0.005 42-62 / 14-34
PF09012.9 FeoC like transcriptional regulator 0.005 42-64 / 14-36
PF12793.6 Sugar transport-related sRNA regulator N-term 0.0052 41-65 / 17-41
PF08280.10 M protein trans-acting positive regulator (MGA) HTH domain 0.0063 41-65 / 19-43
PF13518.5 Helix-turn-helix domain 0.0067 41-64 / 10-33
PF13693.5 Winged helix-turn-helix DNA-binding 0.0073 43-59 / 16-32
PF08279.11 HTH domain 0.0074 42-64 / 15-37
PF05043.12 Mga helix-turn-helix domain 0.0073 41-65 / 29-53
PF01527.19 Transposase 0.0077 40-64 / 19-43
PF01418.16 Helix-turn-helix domain, rpiR family 0.0081 42-64 / 34-56
PF01022.19 Bacterial regulatory protein, arsR family 0.0084 42-64 / 16-38
PF09048.9 Cro 0.0084 42-64 / 13-35
PF05269.10 Bacteriophage CII protein 0.0084 41-64 / 22-45
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 0.0088 40-65 / 80-105
PF16677.4 DNA-packaging protein gp3 0.009 41-65 / 28-52
PF00440.22 Bacterial regulatory proteins, tetR family 0.0093 43-64 / 16-37
PF12964.6 Protein of unknown function (DUF3853) 0.0091 41-64 / 44-67
PF06627.10 Protein of unknown function (DUF1153) 0.0094 41-65 / 45-69
PF13384.5 Homeodomain-like domain 0.011 42-63 / 17-38

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0006270 DNA replication initiation
GO:0004803 transposase activity
GO:0043565 sequence-specific DNA binding
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated
GO:0051775 response to redox state
GO:0006352 DNA-templated transcription, initiation
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0019069 viral capsid assembly
GO:0000150 recombinase activity
GO:0006313 transposition, DNA-mediated
GO:0003700 DNA binding transcription factor activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0006275 regulation of DNA replication
GO:0006260 DNA replication
GO:0005622 intracellular
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045892 negative regulation of transcription, DNA-templated
GO:0005667 transcription factor complex
GO:0016987 sigma factor activity

Loading in process