phrog_3865 is made of 37 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
75.35 108 74


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_020202_p37 YP_007392741.1 hypothetical protein NC_020202 Pseudomonas phage JBD5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
NC_027384_p35 YP_009152338.1 DNA-binding domain-containing protein NC_027384 Pseudomonas phage H70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p174284 no NCBI prot ID no annotation VI_03100 Gammaproteobacteria_gi_553777756_543382_581999 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_030918_p34 YP_009274622.1 hypothetical protein NC_030918 Pseudomonas phage JBD93 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
KT968832_p36 ALP47970.1 hypothetical protein KT968832 Pseudomonas phage YMC11/11/R1836 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; Pseudomonas virus PA1KOR.
NC_023575_p66 YP_009007133.1 Hypothetical protein NC_023575 Pseudomonas phage vB_PaeP_Tr60_Ab31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
p284744 no NCBI prot ID no annotation VI_11930 Gammaproteobacteria_gi_564009922_51140_79168 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
JQ067085_p33 AII21869.1 DNA-binding domain-containing protein JQ067085 Pseudomonas phage PaMx73 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; Pseudomonas virus D3112.
JN808773_p35 AEY99406.1 hypothetical protein JN808773 Pseudomonas virus FHA0480 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
p366495 no NCBI prot ID no annotation VI_11348 Gammaproteobacteria_gi_544782651 Viruses.
NC_020198_p36 YP_007392343.1 hypothetical protein NC_020198 Pseudomonas phage JBD30 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
NC_026601_p38 YP_009125677.1 hypothetical protein NC_026601 Pseudomonas phage vB_PaeS_PAO1_Ab30 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p199323 no NCBI prot ID no annotation VI_03140 Gammaproteobacteria_gi_553792752_467587_504281 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p159370 no NCBI prot ID no annotation VI_02568 Gammaproteobacteria_gi_491042914 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_027298_p31 YP_009146151.1 hypothetical protein NC_027298 Pseudomonas virus LPB1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
p278568 no NCBI prot ID no annotation VI_08956 Gammaproteobacteria_gi_421172173_0_28796 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_023700_p29 YP_009013336.1 hypothetical protein NC_023700 Pseudomonas virus PA1KOR Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
p181130 no NCBI prot ID no annotation VI_03153 Gammaproteobacteria_gi_553794126_73844_111927 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p160375 no NCBI prot ID no annotation VI_03232 Gammaproteobacteria_gi_555533761 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_020200_p34 YP_007392441.1 hypothetical protein NC_020200 Pseudomonas phage JBD88a Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p188224 no NCBI prot ID no annotation VI_03082 Gammaproteobacteria_gi_553770270_829139_866560 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_008717_p31 YP_950455.1 hypothetical protein NC_008717 Pseudomonas virus DMS3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
NC_024330_p34 YP_009042213.1 hypothetical protein NC_024330 Pseudomonas phage JD024 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p279835 no NCBI prot ID no annotation VI_03096 Gammaproteobacteria_gi_553776604_225119_253761 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_030908_p37 YP_009273662.1 hypothetical protein NC_030908 Pseudomonas phage JBD69 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p281337 no NCBI prot ID no annotation VI_11891 Gammaproteobacteria_gi_557842112_51191_79693 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p279794 no NCBI prot ID no annotation VI_03097 Gammaproteobacteria_gi_553776605_199115_227757 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p198471 no NCBI prot ID no annotation VI_11789 Gammaproteobacteria_gi_550039974_247912_284721 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p202608 no NCBI prot ID no annotation VI_03099 Gammaproteobacteria_gi_553777448 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p272454 no NCBI prot ID no annotation VI_11996 Gammaproteobacteria_gi_566137455 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_020203_p37 YP_007392800.1 hypothetical protein NC_020203 Pseudomonas phage JBD24 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p197755 no NCBI prot ID no annotation VI_02540 Gammaproteobacteria_gi_313112493_5538857_5575721 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus; Pseudomonas phage JBD24.
JN811560_p38 AEY99439.2 hypothetical protein JN811560 Pseudomonas phage JBD26 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
p427913 no NCBI prot ID no annotation VI_05693 Betaproteobacteria_gi_487579623 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p428032 no NCBI prot ID no annotation VI_05695 Betaproteobacteria_gi_487583237 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p424989 no NCBI prot ID no annotation VI_05613 Betaproteobacteria_gi_433486252 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p304194 no NCBI prot ID no annotation VI_11159 Gammaproteobacteria_gi_505462751_44632_69999 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_328 377 head maturation protease head and packaging 19 1.02E-52 43.11
phrog_9769 11 type I-F anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 11 0 1000
phrog_9439 11 no annotation unknown function 7 4.55E-32 22.46
phrog_19826 4 no annotation unknown function 3 1.91E-17 7.84
phrog_26475 3 no annotation unknown function 3 0 1000
phrog_20331 4 no annotation unknown function 3 1.91E-17 7.84
phrog_26918 3 no annotation unknown function 3 0 1000
phrog_8400 13 no annotation unknown function 3 1.36E-14 4.99
phrog_29384 2 no annotation unknown function 2 0 1000
phrog_8786 13 type I-E anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 2 8.47E-11 1.19
phrog_17406 5 no annotation unknown function 2 2.96E-12 2.65

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1157 transposase integration and excision 92.6 0.018 21-50 / 14-43
phrog_11671 no annotation unknown function 91.7 0.03 26-47 / 9-30
phrog_13024 no annotation unknown function 93.3 0.01 15-48 / 42-75
phrog_1373 transcriptional regulator transcription regulation 95.2 0.0011 17-47 / 37-67
phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 93.6 0.0085 11-48 / 10-47
phrog_14076 transcriptional regulator transcription regulation 92.2 0.023 15-46 / 5-35
phrog_147 transcriptional regulator transcription regulation 92.4 0.02 16-48 / 7-39
phrog_151 transposase integration and excision 94.0 0.0057 22-55 / 21-54
phrog_18309 no annotation unknown function 99.6 4.8E-19 41-74 / 1-34
phrog_2104 no annotation unknown function 90.7 0.049 12-44 / 46-78
phrog_2328 transcriptional repressor transcription regulation 96.1 0.00014 7-48 / 7-52
phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.1 0.0012 17-50 / 30-63
phrog_2655 excisionase integration and excision 93.1 0.013 26-47 / 9-30
phrog_268 no annotation unknown function 95.0 0.0014 18-49 / 11-41
phrog_2907 excisionase integration and excision 93.6 0.0081 22-60 / 3-41
phrog_2967 transcriptional regulator transcription regulation 93.6 0.0085 14-48 / 11-46
phrog_296 DNA transposition protein integration and excision 92.7 0.017 16-48 / 6-38
phrog_3282 sigma factor transcription regulation 91.4 0.035 22-48 / 30-56
phrog_3470 no annotation unknown function 92.9 0.014 26-54 / 8-36
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.2 0.0011 10-55 / 64-110
phrog_3 transcriptional repressor transcription regulation 95.8 0.00026 14-47 / 6-39
phrog_409 transcriptional regulator transcription regulation 95.1 0.0013 19-70 / 6-48
phrog_4583 transcriptional repressor transcription regulation 93.8 0.0065 16-49 / 15-48
phrog_4779 transcriptional regulator transcription regulation 95.9 0.0002 16-48 / 6-38
phrog_5689 no annotation unknown function 90.2 0.06 24-50 / 2-28
phrog_57 terminase small subunit head and packaging 94.7 0.0024 24-50 / 2-28
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 93.5 0.0088 26-44 / 16-35
phrog_633 transcriptional regulator transcription regulation 90.4 0.056 19-54 / 11-46
phrog_6499 transcriptional regulator transcription regulation 94.0 0.0052 21-44 / 16-45
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 93.2 0.012 11-48 / 55-92
phrog_66 excisionase and transcriptional regulator integration and excision 94.6 0.0026 25-48 / 10-33
phrog_6962 no annotation unknown function 92.0 0.025 21-42 / 11-32
phrog_7067 terminase small subunit head and packaging 94.9 0.0018 12-47 / 19-54
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 92.1 0.025 11-52 / 5-46
phrog_8 transcriptional regulator transcription regulation 92.2 0.023 16-47 / 6-36

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 8.9E-10 12-79 / 6-78
PF13744.5 Helix-turn-helix domain 2.1E-08 13-77 / 15-79
PF01381.21 Helix-turn-helix 4.6E-08 23-75 / 3-54
PF13443.5 Cro/C1-type HTH DNA-binding domain 9E-08 22-79 / 3-62
PF05339.10 Protein of unknown function (DUF739) 1E-07 19-77 / 6-63
PF13413.5 Helix-turn-helix domain 1.2E-07 23-74 / 3-59
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 1.6E-07 21-80 / 3-61
PF12844.6 Helix-turn-helix domain 1.8E-07 21-78 / 4-60
PF14590.5 Domain of unknown function (DUF4447) 2.5E-07 16-78 / 7-71
PF04645.11 Protein of unknown function, DUF603 3.8E-07 14-67 / 5-60
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 6.3E-07 17-77 / 70-128
PF13560.5 Helix-turn-helix domain 6.5E-07 18-76 / 3-63
PF08667.9 BetR domain 1.1E-06 17-80 / 6-72
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 1.4E-06 25-79 / 5-57
PF05269.10 Bacteriophage CII protein 1.8E-06 22-81 / 16-72
PF08965.9 Domain of unknown function (DUF1870) 3.6E-06 18-56 / 3-43
PF13693.5 Winged helix-turn-helix DNA-binding 1.1E-05 20-78 / 6-60
PF14549.5 DNA-binding transcriptional regulator Cro 1.7E-05 22-76 / 3-52
PF12116.7 Stage III sporulation protein D 4.8E-05 25-71 / 15-61
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 5.8E-05 20-68 / 117-164
PF00157.16 Pou domain - N-terminal to homeobox domain 0.00011 16-70 / 7-64
PF10654.8 Protein of unknown function (DUF2481) 0.00011 26-53 / 77-104
PF00356.20 Bacterial regulatory proteins, lacI family 0.00014 31-56 / 1-26
PF02376.14 CUT domain 0.00021 17-78 / 8-67
PF08535.9 KorB domain 0.0018 28-54 / 2-28
PF02042.14 RWP-RK domain 0.0035 23-53 / 6-36
PF07141.10 Putative bacteriophage terminase small subunit 0.0044 27-52 / 29-54
PF06322.10 Phage NinH protein 0.006 22-53 / 9-40
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.007 20-53 / 96-131
PF00376.22 MerR family regulatory protein 0.0075 32-53 / 2-23
PF02954.18 Bacterial regulatory protein, Fis family 0.0083 26-51 / 13-38
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0087 28-54 / 12-38

Annotations of the NCBI proteins of this PHROG


11:hypothetical protein 4:protein of an unannotated phage 2:DNA-binding domain-containing protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0045893 positive regulation of transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0045892 negative regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0003700 DNA binding transcription factor activity
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0043565 sequence-specific DNA binding
GO:0003677 DNA binding

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