phrog_3869 is made of 37 protein sequences and is annotated as "NAD-dependent DNA ligase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
658.97 934 657


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MF403008_p282 AUZ95054.1 DNA ligase MF403008 Agrobacterium phage Atu_ph07 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Polybotosvirus; Agrobacterium virus Atuph07.
NC_022096_p209 YP_008433540.1 DNA ligase NC_022096 Pseudomonas phage PaBG Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Baikalvirus; Pseudomonas virus PaBG.
NC_010811_p65 YP_001949941.1 NAD-dependent DNA ligase NC_010811 Ralstonia phage phiRSL1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Mieseafarmvirus.
AP018399_p178 BBA65326.1 NAD-dependent DNA ligase AP018399 Xanthomonas phage XacN1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_019521_p199 YP_007006813.1 gp206 NC_019521 Sphingomonas phage PAU Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_017972_p77 YP_006382607.1 putative DNA ligase NC_017972 Pseudomonas phage Lu11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KY448244_p147 AQT28626.1 hypothetical protein KY448244 Erwinia phage vB_EamM_Yoloswag Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Yoloswagvirus; Erwinia virus Yoloswag.
KY984068_p148 ARW58788.1 DNA ligase KY984068 Erwinia phage vB_EamM_Y3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Sasquatchvirus; Erwinia virus Y3.
LC168164_p6 BAV39128.1 DNA Ligase LC168164 Tenacibaculum phage pT24 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031039_p94 YP_009282999.1 NAD-dependent DNA-ligase NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF360957_p290 ASU00113.1 DNA ligase MF360957 Bacillus virus PBS1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KT895374_p163 ALN97842.1 NAD-dependent DNA-ligase KT895374 Bacillus phage vB_BpuM-BpSp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_016163_p268 YP_004934501.1 NAD-dependent DNA-ligase NC_016163 Yersinia phage phiR1-37 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_010821_p328 YP_001957054.1 putative DNA ligase NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
MF063068_p313 ARV77482.1 DNA ligase MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
MF042360_p332 ARV76963.1 putative DNA ligase MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
p262423 no NCBI prot ID no annotation VI_05170 Bacilli_gi_511699586 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
MF459646_p108 ASU03562.1 putative NAD dependent DNA ligase MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
NC_007623_p122 YP_418155.1 putative NAD-dependent DNA ligase NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
p351155 no NCBI prot ID no annotation VI_05159 Bacilli_gi_511646970 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_023719_p228 YP_009015539.1 gp236 NC_023719 Bacillus virus G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
AP017924_p161 BAW19135.1 putative DNA ligase AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
p71931 no NCBI prot ID no annotation VI_05747 Clostridia_gi_153883184 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage c-st.
KC131130_p171 AGB07285.1 DNA ligase KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
KY629563_p29 ARK07429.1 DNA ligase KY629563 Sphingobium phage Lacusarx Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lacusarxvirus; Sphingobium virus Lacusarx.
NC_028950_p95 YP_009212944.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
MF459647_p108 ASU03807.1 putative NAD dependent DNA ligase MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
AP017972_p38 BAW98247.1 DNA ligase AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
NC_007581_p32 YP_398462.1 putative NAD-dependent DNA ligase NC_007581 Clostridium phage c-st Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_028999_p254 YP_009217336.1 putative DNA ligase NC_028999 Pseudomonas phage PhiPA3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
p204133 no NCBI prot ID no annotation VI_03007 Gammaproteobacteria_gi_85057978_2871284_2907541 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_028899_p105 YP_009207909.1 putative DNA ligase NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
MG720308_p158 AUR80933.1 DNA ligase MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
AP017925_p158 BAW19421.1 putative DNA ligase AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
NC_031245_p143 YP_009302530.1 DNA ligase NC_031245 Bacillus phage SP-15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Thornevirus; Bacillus virus SP15.
MF285618_p259 ATA65594.1 DNA ligase MF285618 Serratia phage 2050HW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_016571_p153 YP_004958060.1 putative NAD-dependent DNA ligase NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_16292 6 no annotation unknown function 5 1.62E-25 15.91
phrog_12854 8 no annotation unknown function 3 2.21E-15 5.78
phrog_22881 3 no annotation unknown function 3 0 1000
phrog_36743 2 no annotation unknown function 2 0 1000
phrog_29664 2 no annotation unknown function 2 0 1000
phrog_35607 2 no annotation unknown function 2 0 1000
phrog_30149 2 no annotation unknown function 2 0 1000
phrog_26335 3 no annotation unknown function 2 4.31E-13 3.49
phrog_37421 2 no annotation unknown function 2 0 1000
phrog_36354 2 no annotation unknown function 2 0 1000
phrog_36420 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 93.6 0.0083 106-323 / 90-290
phrog_18456 DNA ligase DNA, RNA and nucleotide metabolism 91.2 0.039 5-65 / 59-119
phrog_22334 no annotation unknown function 95.1 0.0013 468-559 / 9-99
phrog_2561 DNA ligase DNA, RNA and nucleotide metabolism 98.3 9.5E-10 578-655 / 77-153
phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 100.0 1.2E-60 10-383 / 2-322
phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 100.0 4.7E-39 390-656 / 3-258
phrog_3989 no annotation unknown function 97.4 5.3E-07 576-654 / 204-295
phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 90.2 0.059 418-551 / 88-218
phrog_6466 DNA ligase DNA, RNA and nucleotide metabolism 94.4 0.0035 6-55 / 16-65

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF01653.17 NAD-dependent DNA ligase adenylation domain 2.1E-53 22-328 / 2-318
PF03120.15 NAD-dependent DNA ligase OB-fold domain 2.1E-22 331-403 / 1-73
PF16770.4 Regulator of Ty1 transposition protein 107 BRCT domain 6.2E-07 598-686 / 11-116
PF00533.25 BRCA1 C Terminus (BRCT) domain 3.5E-05 599-674 / 3-102
PF16589.4 BRCT domain, a BRCA1 C-terminus domain 4.6E-05 600-685 / 3-77
PF12738.6 twin BRCT domain 6.8E-05 606-669 / 2-63
PF16759.4 DNA ligase 3 BRCT domain 7.1E-05 599-678 / 3-77
PF01068.20 ATP dependent DNA ligase domain 0.0025 123-259 / 19-144

Annotations of the NCBI proteins of this PHROG


17:DNA ligase 5:NAD-dependent DNA ligase 3:NAD-dependent DNA-ligase 3:hypothetical protein 2:protein of an unannotated phage 2:NAD dependent DNA ligase 1:DNA Ligase

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K01972 E6.5.1.2, ligA, ligB : DNA ligase (NAD+) [EC:6.5.1.2] ko03030 DNA replication
ko03410 Base excision repair
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
785 37

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006260 DNA replication
GO:0003910 DNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0006281 DNA repair
GO:0003911 DNA ligase (NAD+) activity
GO:0006310 DNA recombination

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