phrog_3887 is made of 36 protein sequences and is annotated as "transcriptional regulator"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
62.78 76 60


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p79537 no NCBI prot ID no annotation VI_11488 Gammaproteobacteria_gi_545091524 Viruses.
NC_028956_p36 YP_009213794.1 hypothetical protein NC_028956 Mannheimia phage vB_MhS_1152AP2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p242553 no NCBI prot ID no annotation VI_10203 Gammaproteobacteria_gi_544678643_2903_35481 Viruses.
KP137439_p39 AJA73403.1 hypothetical protein KP137439 Mannheimia phage vB_MhS_3927AP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p192570 no NCBI prot ID no annotation VI_06566 Gammaproteobacteria_gi_538042148 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p216003 no NCBI prot ID no annotation VI_11391 Gammaproteobacteria_gi_544850691_114053_149179 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p251756 no NCBI prot ID no annotation VI_06642 Gammaproteobacteria_gi_261492386 Viruses.
p242549 no NCBI prot ID no annotation VI_10203 Gammaproteobacteria_gi_544678643_2903_35481 Viruses.
p203715 no NCBI prot ID no annotation VI_03914 Gammaproteobacteria_gi_526467231_1147024_1183338 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p330689 no NCBI prot ID no annotation VI_06637 Gammaproteobacteria_gi_261495926 Viruses.
p277851 no NCBI prot ID no annotation VI_03450 Gammaproteobacteria_gi_378696079_1766164_1795166 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p216411 no NCBI prot ID no annotation VI_03940 Gammaproteobacteria_gi_525701099_393251_428368 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p305486 no NCBI prot ID no annotation VI_06339 Gammaproteobacteria_gi_32035066 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p396764 no NCBI prot ID no annotation VI_06564 Gammaproteobacteria_gi_538038354 Viruses.
p183974 no NCBI prot ID no annotation VI_11406 Gammaproteobacteria_gi_544866847_10486_48336 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p217006 no NCBI prot ID no annotation VI_03503 Gammaproteobacteria_gi_482884694_1738404_1773511 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p369286 no NCBI prot ID no annotation VI_03500 Gammaproteobacteria_gi_472335239_1447613_1465242 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p215998 no NCBI prot ID no annotation VI_03943 Gammaproteobacteria_gi_525662379_203891_239018 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p185180 no NCBI prot ID no annotation VI_06643 Gammaproteobacteria_gi_261492509_75662_113394 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p233850 no NCBI prot ID no annotation VI_02604 Gammaproteobacteria_gi_254360800_29840_63301 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p314054 no NCBI prot ID no annotation VI_11405 Gammaproteobacteria_gi_544866246 Viruses.
p329875 no NCBI prot ID no annotation VI_11396 Gammaproteobacteria_gi_544850854_113815_136068 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028743_p70 YP_009193621.1 hypothetical protein NC_028743 Mannheimia phage vB_MhS_587AP2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p396765 no NCBI prot ID no annotation VI_06564 Gammaproteobacteria_gi_538038354 Viruses.
p347269 no NCBI prot ID no annotation VI_05543 Betaproteobacteria_gi_258589883 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p192573 no NCBI prot ID no annotation VI_06566 Gammaproteobacteria_gi_538042148 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p368104 no NCBI prot ID no annotation VI_09780 Gammaproteobacteria_gi_452745219_99277_117048 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p215799 no NCBI prot ID no annotation VI_03499 Gammaproteobacteria_gi_472332507_1237595_1272725 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_008201_p48 YP_655516.1 hypothetical protein NC_008201 Mannheimia phage phiMHaA1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Baylorvirus.
p369312 no NCBI prot ID no annotation VI_11389 Gammaproteobacteria_gi_544850612_100597_118248 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028898_p50 YP_009207803.1 hypothetical protein NC_028898 Mannheimia phage vB_MhM_587AP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Baylorvirus; unclassified Baylorvirus.
KP137436_p51 AJA73103.1 hypothetical protein KP137436 Mannheimia phage vB_MhM_1127AP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Baylorvirus; Mannheimia virus 1127AP1.
p242521 no NCBI prot ID no annotation VI_10203 Gammaproteobacteria_gi_544678643_2903_35481 Viruses.
KR093652_p22 AKI28247.1 hypothetical protein KR093652 Moraxella phage Mcat28 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KR093640_p8 AKI27657.1 hypothetical protein KR093640 Moraxella phage Mcat16 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KR093639_p8 AKI27615.1 hypothetical protein KR093639 Moraxella phage Mcat15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_1 5879 integrase integration and excision 16 4.10E-34 24.51
phrog_3887 36 transcriptional regulator transcription regulation 2 7.81E-11 1.23

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_3180 Arc-like repressor transcription regulation 96.4 5.5E-05 19-57 / 6-44
phrog_3203 no annotation unknown function 90.7 0.049 15-50 / 12-47
phrog_582 Arc-like repressor transcription regulation 94.9 0.0016 22-56 / 9-43
phrog_7325 CopG-like transcriptional repressor transcription regulation 96.9 5.6E-06 15-57 / 36-78
phrog_876 transcriptional repressor transcription regulation 96.4 4.5E-05 17-58 / 15-56

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF16777.4 Transcriptional regulator, RHH-like, CopG 3.3E-10 33-71 / 1-39
PF10723.8 Replication regulatory protein RepB 4.8E-10 7-70 / 13-79
PF03869.13 Arc-like DNA binding domain 3.3E-09 30-73 / 4-47
PF05509.10 TraY domain 4.4E-09 33-69 / 1-37
PF09274.9 ParG 5E-09 29-71 / 31-73
PF05534.11 HicB family 1E-08 30-64 / 17-51
PF07878.10 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 1.4E-08 32-71 / 3-42
PF12651.6 Ribbon-helix-helix domain 2.2E-08 30-70 / 2-42
PF04221.11 RelB antitoxin 2.3E-08 31-72 / 2-43
PF09386.9 Antitoxin ParD 2.9E-08 31-70 / 2-41
PF01402.20 Ribbon-helix-helix protein, copG family 6E-08 33-69 / 2-39
PF08681.10 Protein of unknown function (DUF1778) 3.9E-07 32-69 / 1-38
PF09957.8 Bacterial antitoxin of type II TA system, VapB 4.3E-07 32-72 / 2-40
PF12441.7 CopG antitoxin of type II toxin-antitoxin system 6.2E-07 30-66 / 39-75
PF07328.10 T-DNA border endonuclease VirD1 1.3E-06 28-66 / 19-57
PF17206.2 SeqA protein N-terminal domain 2.5E-06 34-65 / 3-34
PF03693.13 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 2.9E-06 30-71 / 2-44
PF14384.5 BrnA antitoxin of type II toxin-antitoxin system 5.3E-06 30-68 / 44-78
PF13467.5 Ribbon-helix-helix domain 0.00016 30-64 / 9-43
PF16762.4 Ribbon-helix-helix domain 0.00018 30-71 / 2-46
PF17363.1 Family of unknown function (DUF5388) 0.00019 30-71 / 7-49
PF15919.4 HicB_like antitoxin of bacterial toxin-antitoxin system 0.0006 30-63 / 90-126
PF17414.1 MatP C-terminal ribbon-helix-helix domain 0.00061 33-68 / 5-40
PF07362.11 Post-segregation antitoxin CcdA 0.00061 32-70 / 3-37
PF07704.10 Rv0623-like transcription factor 0.0042 38-72 / 5-39
PF11888.7 Protein of unknown function (DUF3408) 0.005 31-73 / 85-130
PF07600.10 Protein of unknown function (DUF1564) 0.0075 29-64 / 82-117
PF11903.7 ParD-like antitoxin of type II bacterial toxin-antitoxin system 0.0083 33-65 / 2-34

Annotations of the NCBI proteins of this PHROG


9:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006276 plasmid maintenance
GO:0004519 endonuclease activity
GO:0006355 regulation of transcription, DNA-templated
GO:0000746 conjugation
GO:0003677 DNA binding

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