phrog_3910 is made of 36 protein sequences and is annotated as "transcriptional regulator"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
131.03 443 106


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_027372_p42 YP_009151510.1 transcriptional regulator NC_027372 Bacillus phage Pascal Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus.
NC_027394_p43 YP_009152842.1 transcriptional regulator NC_027394 Bacillus phage Pookie Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus.
NC_028782_p42 YP_009197511.1 transcriptional regulator NC_028782 Bacillus phage Pavlov Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus; unclassified Pagevirus.
NC_022770_p41 YP_008771359.1 DNA binding protein NC_022770 Bacillus phage Pony Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus.
NC_022764_p41 YP_008770548.1 DNA binding protein NC_022764 Bacillus phage Page Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus.
NC_028926_p42 YP_009210077.1 transcriptional regulator NC_028926 Bacillus phage Palmer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Pagevirus.
NC_029069_p47 YP_009223197.1 helix-turn-helix Hin protein NC_029069 Bacillus phage BM5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p376258 no NCBI prot ID no annotation VI_05477 Bacilli_gi_493972587 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p412068 no NCBI prot ID no annotation VI_05485 Bacilli_gi_493987063 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Bacillus phage phBC6A52.
p146812 no NCBI prot ID no annotation VI_00894 Bacilli_gi_336233546_739015_780180 Viruses.
NC_021784_p47 YP_008240351.1 hypothetical protein NC_021784 Thermus phage phi OH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_009737_p53 YP_001425631.1 hypothetical protein NC_009737 Bacillus virus 1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Svunavirus.
p184916 no NCBI prot ID no annotation VI_05451 Bacilli_gi_519663067_11023_48772 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Thermus phage phi OH2.
p38537 no NCBI prot ID no annotation VI_00405 Bacilli_gi_423364338 Viruses.
p54932 no NCBI prot ID no annotation VI_00741 Bacilli_gi_407708681 Viruses.
p93488 no NCBI prot ID no annotation VI_00687 Bacilli_gi_507025386 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Staphylococcus phage SpaA1.
NC_028748_p69 YP_009194043.1 hypothetical protein NC_028748 Bacillus phage vB_BtS_BMBtp3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p388272 no NCBI prot ID no annotation VI_05061 Bacilli_gi_565801942_36621_52109 Viruses.
p89557 no NCBI prot ID no annotation VI_00692 Bacilli_gi_507027989 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Staphylococcus phage SpaA1.
p61718 no NCBI prot ID no annotation VI_00738 Bacilli_gi_384183548 Viruses.
NC_029008_p56 YP_009218189.1 hypothetical protein NC_029008 Bacillus phage phi4J1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_018277_p54 YP_006560742.1 Zn-finger protein fused to HTH domain NC_018277 Staphylococcus phage SpaA1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p279446 no NCBI prot ID no annotation VI_05066 Bacilli_gi_565802559_2241_30926 Viruses.
KT852578_p51 ALJ98043.1 hypothetical protein KT852578 Bacillus phage BMBtp1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p335120 no NCBI prot ID no annotation VI_05069 Bacilli_gi_565802644 Viruses.
p327210 no NCBI prot ID no annotation VI_05067 Bacilli_gi_565802561 Viruses.
NC_025424_p9 YP_009099274.1 hypothetical protein NC_025424 Bacillus phage Waukesha92 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p213864 no NCBI prot ID no annotation VI_00739 Bacilli_gi_402558249_34571_69901 Viruses.
p36996 no NCBI prot ID no annotation VI_00613 Bacilli_gi_505484080 Viruses.
p58531 no NCBI prot ID no annotation VI_00734 Bacilli_gi_221316922 Viruses.
p287713 no NCBI prot ID no annotation VI_05063 Bacilli_gi_565802131 Viruses.
p53756 no NCBI prot ID no annotation VI_00978 Bacilli_gi_568179610_5447_60563 Viruses.
KT970646_p68 ALO79901.1 hypothetical protein KT970646 Bacillus phage phiS58 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
MG251388_p34 ATW62287.1 hypothetical protein MG251388 Pseudomonas phage Psp6 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p388916 no NCBI prot ID no annotation VI_00705 Bacilli_gi_507053064 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p151899 no NCBI prot ID no annotation VI_00910 Bacilli_gi_484080317 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_843 171 Holliday junction resolvase DNA, RNA and nucleotide metabolism 18 8.18E-55 45.21
phrog_1190 126 RNA polymerase sigma factor transcription regulation 16 1.33E-50 41.0
phrog_11547 9 no annotation unknown function 7 1.01E-32 23.12
phrog_36 1547 transcriptional regulator transcription regulation 6 5.85E-11 1.35
phrog_4331 32 no annotation unknown function 4 5.72E-16 6.36
phrog_14287 7 no annotation unknown function 4 5.97E-20 10.35
phrog_6048 20 no annotation unknown function 3 1.82E-13 3.86

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 91.0 0.043 74-101 / 136-163
phrog_11376 no annotation unknown function 95.9 0.00022 33-104 / 15-83
phrog_11420 DNA binding protein DNA, RNA and nucleotide metabolism 90.2 0.059 74-101 / 20-47
phrog_1157 transposase integration and excision 92.2 0.022 67-101 / 6-39
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 94.3 0.0041 69-105 / 148-184
phrog_1303 DNA binding protein DNA, RNA and nucleotide metabolism 91.6 0.032 67-105 / 33-71
phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 90.0 0.063 74-102 / 14-42
phrog_1373 transcriptional regulator transcription regulation 94.6 0.0027 72-101 / 37-66
phrog_151 transposase integration and excision 94.2 0.0042 69-104 / 12-48
phrog_1566 no annotation unknown function 94.8 0.002 72-94 / 7-29
phrog_1740 RNA polymerase sigma factor transcription regulation 93.7 0.0076 74-102 / 137-165
phrog_1889 terminase small subunit head and packaging 91.9 0.028 69-97 / 9-40
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 96.1 0.00013 62-101 / 53-92
phrog_20634 no annotation unknown function 99.5 1.4E-18 2-104 / 4-110
phrog_2308 no annotation unknown function 94.8 0.0021 70-104 / 7-41
phrog_2538 terminase small subunit head and packaging 91.9 0.027 75-103 / 15-43
phrog_309 terminase small subunit head and packaging 92.0 0.026 69-101 / 14-46
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.5 0.00063 64-99 / 64-99
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 95.8 0.00025 63-103 / 4-44
phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 90.1 0.061 62-101 / 75-114
phrog_4494 no annotation unknown function 94.6 0.0027 70-101 / 8-39
phrog_4646 transposase integration and excision 93.9 0.006 59-101 / 3-44
phrog_4779 transcriptional regulator transcription regulation 92.6 0.017 73-103 / 8-38
phrog_5751 terminase large subunit head and packaging 90.6 0.051 67-98 / 6-37
phrog_6156 endonuclease DNA, RNA and nucleotide metabolism 93.3 0.011 70-98 / 25-53
phrog_6223 transcriptional repressor transcription regulation 95.4 0.00076 64-99 / 6-37
phrog_645 Rnase E DNA, RNA and nucleotide metabolism 95.3 0.00092 62-100 / 18-56
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 96.5 3.8E-05 62-104 / 52-93
phrog_6831 transcriptional regulator transcription regulation 92.3 0.021 64-101 / 3-37
phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.4 0.055 63-98 / 20-56
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.3 0.004 69-104 / 34-69
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 94.6 0.0027 74-105 / 13-44
phrog_7847 no annotation unknown function 90.7 0.049 74-100 / 12-38
phrog_867 DNA binding domain DNA, RNA and nucleotide metabolism 93.3 0.01 56-106 / 8-55
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 94.9 0.0016 80-105 / 19-44

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF08822.10 Protein of unknown function (DUF1804) 0.001 81-168 / 18-110
PF01710.15 Transposase 0.00016 75-168 / 11-100
PF00292.17 'Paired box' domain 0.0033 75-110 / 26-61
PF04936.11 Protein of unknown function (DUF658) 0.00013 82-167 / 14-117
PF04552.12 Sigma-54, DNA binding domain 0.00083 10-53 / 29-74
PF07141.10 Putative bacteriophage terminase small subunit 0.0012 17-53 / 21-57
PF12759.6 InsA C-terminal domain 0.0013 12-51 / 6-45
PF09607.9 Brinker DNA-binding domain 0.0015 11-53 / 5-51
PF13011.5 leucine-zipper of insertion element IS481 0.0019 10-55 / 6-52
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0023 19-55 / 5-41
PF07750.10 GcrA cell cycle regulator 0.0039 12-54 / 3-46
PF05344.10 Domain of Unknown Function (DUF746) 0.0039 19-54 / 4-39
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0037 10-51 / 10-50
PF02796.14 Helix-turn-helix domain of resolvase 0.0041 16-50 / 10-44
PF13411.5 MerR HTH family regulatory protein 0.0047 29-54 / 2-27
PF10668.8 Phage terminase small subunit 0.0065 11-55 / 4-50
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0064 12-52 / 7-48

Annotations of the NCBI proteins of this PHROG


8:hypothetical protein 4:transcriptional regulator 2:DNA binding protein 1:helix-turn-helix Hin protein 1:Zn-finger protein fused to HTH domain

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0000150 recombinase activity
GO:0006355 regulation of transcription, DNA-templated
GO:0005524 ATP binding
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0019069 viral capsid assembly

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