Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
172.43 | 220 | 165 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p435888 | no NCBI prot ID | no annotation | VI_05596 | Betaproteobacteria_gi_421565330 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p162598 | no NCBI prot ID | no annotation | VI_05542 | Betaproteobacteria_gi_260590258_28330_68074 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p296644 | no NCBI prot ID | no annotation | VI_05559 | Betaproteobacteria_gi_416182996_9218_35501 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
p429864 | no NCBI prot ID | no annotation | VI_05705 | Betaproteobacteria_gi_545065342 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p430204 | no NCBI prot ID | no annotation | VI_05709 | Betaproteobacteria_gi_545067074 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p430737 | no NCBI prot ID | no annotation | VI_05712 | Betaproteobacteria_gi_545068093 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p430087 | no NCBI prot ID | no annotation | VI_05675 | Betaproteobacteria_gi_487537359 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p430448 | no NCBI prot ID | no annotation | VI_05677 | Betaproteobacteria_gi_487539860 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p428429 | no NCBI prot ID | no annotation | VI_05673 | Betaproteobacteria_gi_487534473 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p176449 | no NCBI prot ID | no annotation | VI_05560 | Betaproteobacteria_gi_416196569 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
p79823 | no NCBI prot ID | no annotation | VI_03502 | Gammaproteobacteria_gi_481847813_2203371_2251211 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p290435 | no NCBI prot ID | no annotation | VI_05548 | Betaproteobacteria_gi_299534258 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
NC_026611_p20 | YP_009126623.1 | hypothetical protein | NC_026611 | Edwardsiella phage GF-2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Gofduovirus; Edwardsiella virus GF2. |
p159598 | no NCBI prot ID | no annotation | VI_00105 | Alphaproteobacteria_gi_484075156_0_39986 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p75867 | no NCBI prot ID | no annotation | VI_09316 | Gammaproteobacteria_gi_483400214 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
JX403939_p31 | AFQ22056.1 | hypothetical protein | JX403939 | Pseudomonas phage YMC/01/01/P52_PAE_BP | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p228381 | no NCBI prot ID | no annotation | VI_09990 | Gammaproteobacteria_gi_555236478 | Viruses. |
p308128 | no NCBI prot ID | no annotation | VI_10109 | Gammaproteobacteria_gi_555288815 | Viruses. |
p150827 | no NCBI prot ID | no annotation | VI_11870 | Gammaproteobacteria_gi_554640811_1264_42009 | Viruses. |
p180388 | no NCBI prot ID | no annotation | VI_11803 | Gammaproteobacteria_gi_565819789_0_38145 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p430034 | no NCBI prot ID | no annotation | VI_11868 | Gammaproteobacteria_gi_554634163 | Viruses. |
p51899 | no NCBI prot ID | no annotation | VI_03227 | Gammaproteobacteria_gi_554496818_24732_80798 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
NC_030909_p49 | YP_009273731.1 | hypothetical protein | NC_030909 | Pseudomonas phage YMC11/07/P54_PAE_BP | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p330531 | no NCBI prot ID | no annotation | VI_10027 | Gammaproteobacteria_gi_555245341 | Viruses. |
p408194 | no NCBI prot ID | no annotation | VI_07728 | Gammaproteobacteria_gi_402296116 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p136287 | no NCBI prot ID | no annotation | VI_01598 | Gammaproteobacteria_gi_545244392_1624299_1666433 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lambdavirus; unclassified Lambdavirus. |
p385247 | no NCBI prot ID | no annotation | VI_03362 | Gammaproteobacteria_gi_556555636 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p101140 | no NCBI prot ID | no annotation | VI_01487 | Gammaproteobacteria_gi_545213481_290690_335653 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p36146 | no NCBI prot ID | no annotation | VI_02569 | Gammaproteobacteria_gi_224580183 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p292174 | no NCBI prot ID | no annotation | VI_06950 | Gammaproteobacteria_gi_416222931 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
KR093625_p44 | AKI27011.1 | hypothetical protein | KR093625 | Moraxella phage Mcat1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
KR093626_p44 | AKI27062.1 | hypothetical protein | KR093626 | Moraxella phage Mcat2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
KR093627_p31 | AKI27101.1 | hypothetical protein | KR093627 | Moraxella phage Mcat3 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p400833 | no NCBI prot ID | no annotation | VI_07709 | Gammaproteobacteria_gi_483970284 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p119844 | no NCBI prot ID | no annotation | VI_06228 | Deltaproteobacteria_gi_347732078 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_4 | 3265 | transcriptional repressor | transcription regulation | 4 | 1.31E-11 | 2.01 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_2266 | no annotation | unknown function | 95.1 | 0.0012 | 10-150 / 13-139 |
phrog_3675 | no annotation | unknown function | 94.6 | 0.0028 | 9-85 / 10-90 |
phrog_436 | no annotation | unknown function | 96.1 | 0.00012 | 10-83 / 13-84 |
phrog_585 | no annotation | unknown function | 93.6 | 0.0084 | 2-149 / 1-123 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF14557.5 | Putative AphA-like transcriptional regulator | 3.3E-12 | 14-90 / 9-89 |
PF02334.15 | Replication terminator protein | 2.4E-10 | 14-90 / 19-102 |
PF03965.15 | Penicillinase repressor | 8.4E-10 | 14-88 / 4-74 |
PF11313.7 | Protein of unknown function (DUF3116) | 9.7E-10 | 14-90 / 8-81 |
PF14394.5 | Domain of unknown function (DUF4423) | 1.3E-09 | 7-90 / 15-91 |
PF04079.15 | Segregation and condensation complex subunit ScpB | 1.5E-09 | 14-90 / 84-151 |
PF07381.10 | Winged helix DNA-binding domain (DUF1495) | 5.4E-09 | 11-88 / 7-88 |
PF10007.8 | Uncharacterized protein conserved in archaea (DUF2250) | 5.7E-09 | 12-90 / 7-92 |
PF01090.18 | Ribosomal protein S19e | 1.2E-08 | 16-90 / 54-134 |
PF03551.13 | Transcriptional regulator PadR-like family | 1.6E-08 | 28-89 / 13-73 |
PF09639.9 | YjcQ protein | 2.7E-08 | 17-90 / 2-82 |
PF10711.8 | Hypothetical protein (DUF2513) | 3.2E-08 | 14-90 / 6-84 |
PF14277.5 | Domain of unknown function (DUF4364) | 3.3E-08 | 15-90 / 2-72 |
PF05584.10 | Sulfolobus plasmid regulatory protein | 5.7E-08 | 18-87 / 10-71 |
PF13601.5 | Winged helix DNA-binding domain | 5.8E-08 | 16-90 / 3-71 |
PF02002.16 | TFIIE alpha subunit | 7.1E-08 | 14-90 / 13-83 |
PF09857.8 | Putative toxin of bacterial toxin-antitoxin pair | 1E-07 | 14-90 / 6-79 |
PF12793.6 | Sugar transport-related sRNA regulator N-term | 2.3E-07 | 17-90 / 6-74 |
PF09114.9 | Transcription factor MotA, activation domain | 2.6E-07 | 14-90 / 17-80 |
PF13463.5 | Winged helix DNA-binding domain | 4E-07 | 14-84 / 4-67 |
PF08535.9 | KorB domain | 4.7E-07 | 29-90 / 3-61 |
PF05732.10 | Firmicute plasmid replication protein (RepL) | 4.8E-07 | 14-90 / 56-145 |
PF09824.8 | ArsR transcriptional regulator | 7.7E-07 | 3-65 / 7-62 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 8.2E-07 | 17-65 / 11-57 |
PF03428.12 | Replication protein C N-terminal domain | 1E-06 | 14-90 / 44-127 |
PF14947.5 | Winged helix-turn-helix | 1.4E-06 | 14-90 / 3-70 |
PF09202.10 | Rio2, N-terminal | 1.5E-06 | 14-90 / 7-76 |
PF01638.16 | HxlR-like helix-turn-helix | 1.8E-06 | 13-90 / 5-76 |
PF07848.11 | PaaX-like protein | 4.7E-06 | 28-84 / 19-70 |
PF04492.12 | Bacteriophage replication protein O | 4.8E-06 | 14-66 / 28-84 |
PF05158.11 | RNA polymerase Rpc34 subunit | 5.3E-06 | 14-83 / 93-160 |
PF07900.10 | Protein of unknown function (DUF1670) | 5.8E-06 | 14-89 / 78-157 |
PF08221.10 | RNA polymerase III subunit RPC82 helix-turn-helix domain | 6.5E-06 | 12-65 / 12-61 |
PF16221.4 | winged helix-turn-helix | 7.3E-06 | 14-63 / 32-78 |
PF09012.9 | FeoC like transcriptional regulator | 1.3E-05 | 19-68 / 6-51 |
PF07037.10 | Putative transcription regulator (DUF1323) | 1.4E-05 | 31-90 / 2-54 |
PF02295.16 | Adenosine deaminase z-alpha domain | 1.6E-05 | 14-65 / 5-53 |
PF08222.10 | CodY helix-turn-helix domain | 1.7E-05 | 28-65 / 3-38 |
PF03444.14 | Winged helix-turn-helix transcription repressor, HrcA DNA-binding | 2E-05 | 28-90 / 23-76 |
PF08461.9 | Ribonuclease R winged-helix domain | 2E-05 | 29-87 / 12-64 |
PF13034.5 | Protein of unknown function (DUF3895) | 2E-05 | 14-67 / 4-69 |
PF09904.8 | Winged helix-turn helix | 2.1E-05 | 15-85 / 9-74 |
PF14338.5 | Mrr N-terminal domain | 2.3E-05 | 43-89 / 49-86 |
PF06969.15 | HemN C-terminal domain | 3.1E-05 | 16-85 / 9-65 |
PF12840.6 | Helix-turn-helix domain | 3.5E-05 | 9-65 / 4-54 |
PF06163.10 | Bacterial protein of unknown function (DUF977) | 3.9E-05 | 13-66 / 12-61 |
PF01475.18 | Ferric uptake regulator family | 4E-05 | 14-90 / 8-83 |
PF07106.12 | Tat binding protein 1(TBP-1)-interacting protein (TBPIP) | 4E-05 | 15-66 / 3-53 |
PF04182.11 | B-block binding subunit of TFIIIC | 4.4E-05 | 15-66 / 4-53 |
PF16864.4 | Dimerisation domain | 4.5E-05 | 14-90 / 19-81 |
PF02082.19 | Transcriptional regulator | 6E-05 | 15-64 / 10-57 |
PF01726.15 | LexA DNA binding domain | 6.3E-05 | 29-65 / 25-60 |
PF01978.18 | Sugar-specific transcriptional regulator TrmB | 8.9E-05 | 14-65 / 9-56 |
PF08784.10 | Replication protein A C terminal | 9.9E-05 | 14-66 / 41-96 |
PF04703.11 | FaeA-like protein | 0.00011 | 17-65 / 4-48 |
PF01047.21 | MarR family | 0.00014 | 15-67 / 5-53 |
PF09182.9 | Bacterial purine repressor, N-terminal | 0.00019 | 14-64 / 5-58 |
PF10771.8 | Winged helix-turn-helix domain (DUF2582) | 0.00019 | 14-66 / 9-57 |
PF09339.9 | IclR helix-turn-helix domain | 0.00019 | 16-64 / 6-51 |
PF12802.6 | MarR family | 0.00021 | 15-66 / 7-56 |
PF00126.26 | Bacterial regulatory helix-turn-helix protein, lysR family | 0.00025 | 31-64 / 13-47 |
PF01022.19 | Bacterial regulatory protein, arsR family | 0.00029 | 15-61 / 4-46 |
PF16365.4 | Ethanolamine utilization protein EutK C-terminus | 0.00043 | 17-64 / 6-50 |
PF13412.5 | Winged helix-turn-helix DNA-binding | 0.00043 | 16-61 / 6-47 |
PF09821.8 | C-terminal AAA-associated domain | 0.00084 | 34-90 / 2-46 |
PF03297.14 | S25 ribosomal protein | 0.00095 | 17-65 / 46-90 |
PF08220.11 | DeoR-like helix-turn-helix domain | 0.001 | 18-64 / 5-47 |
PF00392.20 | Bacterial regulatory proteins, gntR family | 0.0012 | 28-65 / 22-58 |
PF15977.4 | Winged helix-turn-helix DNA binding | 0.0013 | 28-64 / 22-56 |
PF13545.5 | Crp-like helix-turn-helix domain | 0.0015 | 28-63 / 26-59 |
PF01325.18 | Iron dependent repressor, N-terminal DNA binding domain | 0.0017 | 28-65 / 20-55 |
PF14502.5 | Helix-turn-helix domain | 0.0017 | 28-65 / 5-40 |
PF01418.16 | Helix-turn-helix domain, rpiR family | 0.0025 | 14-65 / 17-68 |
PF08279.11 | HTH domain | 0.0029 | 17-59 / 4-43 |
PF00325.19 | Bacterial regulatory proteins, crp family | 0.0054 | 31-61 / 4-32 |
PF13730.5 | Helix-turn-helix domain | 0.0056 | 42-61 / 33-52 |
PF05331.10 | Protein of unknown function (DUF742) | 0.0063 | 15-65 / 43-87 |
PF09397.9 | Ftsk gamma domain | 0.0069 | 17-65 / 9-53 |
PF03501.14 | Plectin/S10 domain | 0.0073 | 43-90 / 37-78 |
PF01316.20 | Arginine repressor, DNA binding domain | 0.0079 | 14-65 / 6-55 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0007131 | reciprocal meiotic recombination |
GO:0004674 | protein serine/threonine kinase activity |
GO:0006383 | transcription by RNA polymerase III |
GO:0005622 | intracellular |
GO:0009289 | pilus |
GO:0006260 | DNA replication |
GO:0045892 | negative regulation of transcription, DNA-templated |
GO:0005667 | transcription factor complex |
GO:0006274 | DNA replication termination |
GO:0005840 | ribosome |
GO:0003700 | DNA binding transcription factor activity |
GO:0003677 | DNA binding |
GO:0003726 | double-stranded RNA adenosine deaminase activity |
GO:0006468 | protein phosphorylation |
GO:0006412 | translation |
GO:0006525 | arginine metabolic process |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0051304 | chromosome separation |
GO:0003735 | structural constituent of ribosome |
GO:0003723 | RNA binding |
GO:0004252 | serine-type endopeptidase activity |
GO:0005524 | ATP binding |
GO:0006276 | plasmid maintenance |
GO:0006508 | proteolysis |
GO:0005666 | DNA-directed RNA polymerase III complex |