phrog_4008 is made of 35 protein sequences and is annotated as "DNA polymerase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
300.71 488 281


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_025426_p41 YP_009099378.1 putative DNA polymerase NC_025426 Staphylococcus phage P108 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus.
KY779848_p150 ARQ95906.1 hypothetical protein KY779848 Staphylococcus phage qdsa001 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Silviavirus; unclassified Silviavirus.
KX961630_p133 AOZ62054.1 DNA polymerase II KX961630 Bacillus phage QCM8 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Tsarbombavirus; unclassified Tsarbombavirus.
MH107769_p145 AVX47499.1 DNA polymerase I MH107769 Staphylococcus phage vB_SauM_0414_108 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; unclassified Kayvirus.
FR852584_p60 CCA65790.1 hypothetical protein FR852584 Staphylococcus phage ISP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1.
NC_027352_p138 YP_009149176.1 putative DNA polymerase II NC_027352 Bacillus phage JBP901 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
NC_024359_p136 YP_009042944.1 putative DNA polymerase I NC_024359 Listeria phage LP-048 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP048.
NC_023009_p122 YP_008873642.1 ORF035-like protein NC_023009 Staphylococcus phage Sb-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus Sb1.
NC_009811_p137 YP_001468517.1 gp137 NC_009811 Listeria virus A511 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus.
NC_007066_p62 YP_240953.1 ORF035 NC_007066 Staphylococcus virus G1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus.
NC_016563_p86 YP_004957100.1 gp85 NC_016563 Bacillus phage W.Ph Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Wphvirus.
KY549443_p38 APZ81965.1 3'-5' exonuclease KY549443 Enterococcus phage EFP01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Brockvirinae; Schiekvirus; Enterococcus virus EFP01.
NC_020871_p128 YP_007676796.1 3'-5' exonuclease NC_020871 Listeria phage vB_LmoM_AG20 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus AG20.
AY954969_p62 AAX92117.1 ORF035 AY954969 Staphylococcus virus G1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus.
KR902361_p151 AKQ07159.1 DNA polymerase I KR902361 Staphylococcus phage IME-SA118 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1; Staphylococcus phage Team1.
NC_025417_p146 YP_009098280.1 DNA polymerase NC_025417 Staphylococcus phage Team1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus.
KY581279_p134 AQT25569.1 putative DNA polymerase A KY581279 Staphylococcus phage pSa-3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; unclassified Kayvirus.
NC_031056_p143 YP_009285455.1 DNA polymerase NC_031056 Bacillus phage Deep Blue Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
DQ004855_p68 AAY53371.1 gp68 DQ004855 Listeria virus P100 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus.
NC_024364_p37 YP_009043413.1 DNA polymerase I NC_024364 Listeria phage List-36 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus List36.
KR908644_p153 AKQ07365.1 DNA polymerase I KR908644 Staphylococcus phage IME-SA119 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1.
NC_019726_p201 YP_007112946.1 DNA polymerase NC_019726 Staphylococcus phage JD007 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus.
KX011028_p57 ANH50468.1 DNA polymerase KX011028 Staphylococcus phage pSco-10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; unclassified Kayvirus.
NC_029009_p173 YP_009218373.1 3'-5' exonuclease NC_029009 Enterococcus phage EFDG1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Brockvirinae; Schiekvirus; Enterococcus virus EFDG1.
NC_027374_p114 YP_009151677.1 DNA polymerase subunit NC_027374 Bacillus phage Moonbeam Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bacillus virus Moonbeam.
NC_027355_p177 YP_009149738.1 putative DNA polymerase NC_027355 Bacillus phage BCP8-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
KP687432_p123 AKC02539.1 DNA polymerase I KP687432 Staphylococcus phage IME-SA2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1.
NC_024787_p147 YP_009055735.1 putative DNA polymerase I NC_024787 Listeria phage LMTA-148 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMTA148.
JX875065_p175 AFV80720.1 putative DNA polymerase JX875065 Staphylococcus phage SA5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1.
NC_022771_p129 YP_008771495.1 3'-5' exonuclease NC_022771 Bacillus phage Grass Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Nitunavirus.
NC_024383_p150 YP_009044607.1 putative DNA polymerase I NC_024383 Listeria phage LP-083-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP083-2.
NC_021781_p156 YP_008240117.1 putative DNA polymerase I NC_021781 Listeria phage LP-125 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP083-2.
KP687431_p86 AKC02293.1 DNA polymerase I KP687431 Staphylococcus phage IME-SA1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; Staphylococcus virus G1.
MF398190_p145 AST15662.1 DNA polymerase I MF398190 Staphylococcus phage vB_SauM-fRuSau02 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; unclassified Kayvirus.
NC_024792_p121 YP_009056390.1 DNA polymerase A.1 NC_024792 Bacillus phage Bobb Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Agatevirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_379 331 DNA binding protein DNA, RNA and nucleotide metabolism 29 1.31E-84 75.0
phrog_2340 64 endonuclease DNA, RNA and nucleotide metabolism 23 6.83E-84 74.29
phrog_17 2050 DNA polymerase DNA, RNA and nucleotide metabolism 8 9.31E-14 4.15
phrog_1035 143 endonuclease VII DNA, RNA and nucleotide metabolism 4 1.13E-12 3.07
phrog_9421 11 no annotation unknown function 2 7.43E-11 1.25

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 96.3 5.8E-05 207-281 / 2-67

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF03167.18 Uracil DNA glycosylase superfamily 2.5E-21 1-168 / 7-166
PF16265.4 Domain of unknown function (DUF4918) 2.8E-21 2-156 / 55-211
PF00929.23 Exonuclease 1E-09 212-351 / 1-160
PF01612.19 3'-5' exonuclease 2.1E-08 191-355 / 3-198
PF13361.5 UvrD-like helicase C-terminal domain 1.2E-05 261-357 / 270-366
PF16473.4 3' exoribonuclease, RNase T-like 7E-05 334-354 / 157-175
PF13482.5 RNase_H superfamily 8.2E-05 212-330 / 1-110
PF10108.8 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 0.00096 261-358 / 38-176
PF04857.19 CAF1 family ribonuclease 0.0016 274-351 / 262-369

Annotations of the NCBI proteins of this PHROG


11:DNA polymerase I 8:DNA polymerase 4:3'-5' exonuclease 3:protein of an unannotated phage 3:hypothetical protein 2:DNA polymerase II 1:DNA polymerase subunit 1:DNA polymerase A.1 1:ORF035-like protein 1:DNA polymerase A

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006139 nucleobase-containing compound metabolic process
GO:0003676 nucleic acid binding
GO:0008408 3'-5' exonuclease activity
GO:0016787 hydrolase activity
GO:0005524 ATP binding

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