phrog_4044 is made of 34 protein sequences and is annotated as "terminase small subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
175.06 319 171


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_028980_p1 YP_009215692.1 putative small terminase NC_028980 Pseudomonas phage PAE1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus.
KX961385_p51 APL99111.1 terminase small subunit KX961385 Bordetella virus LK3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; unclassified Vojvodinavirus.
NC_007809_p11 YP_001294519.1 hypothetical protein ORF011 NC_007809 Pseudomonas phage M6 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus.
NC_018282_p50 YP_006561057.1 hypothetical protein NC_018282 Pseudomonas phage MP1412 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus.
NC_010116_p50 YP_001595873.1 hypothetical protein NC_010116 Pseudomonas phage YuA Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus.
KC758116_p60 AGI11296.1 terminase small subunit KC758116 Pseudomonas phage LKO4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus; Pseudomonas virus LKO4.
KY000219_p54 APL99272.1 terminase small subunit KY000219 Bordetella phage CN2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus CN2.
KY000220_p53 APL99352.1 terminase small subunit KY000220 Bordetella phage FP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus FP1.
KY000218_p53 APL99191.1 terminase small subunit KY000218 Bordetella phage MW2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus MW2.
MF490239_p66 ASZ72364.1 hypothetical protein MF490239 Pseudomonas phage vB_PaeS_S218 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus; unclassified Yuavirus.
KX198613_p1 ANO57369.1 terminase small subunit KX198613 Pseudomonas phage AN14 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus; unclassified Yuavirus.
KY000221_p52 APL99431.1 terminase small subunit KY000221 Bordetella phage CN1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vojvodinavirus; Bordetella virus CN1.
KT266805_p53 AKQ75843.1 hypothetical protein KT266805 Roseobacter phage RDJL Phi 2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Xiamenvirus; Roseobacter virus RDJL2.
NC_015466_p62 YP_004421830.1 hypothetical protein RDJLphi1_gp62 NC_015466 Roseobacter phage RDJL Phi 1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Xiamenvirus.
p304166 no NCBI prot ID no annotation VI_12094 Gammaproteobacteria_gi_550401017 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p170270 no NCBI prot ID no annotation VI_12103 Gammaproteobacteria_gi_550304393 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p158276 no NCBI prot ID no annotation VI_12092 Gammaproteobacteria_gi_550392970_235_40300 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p170223 no NCBI prot ID no annotation VI_12097 Gammaproteobacteria_gi_550420495 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p304269 no NCBI prot ID no annotation VI_12107 Gammaproteobacteria_gi_550370650 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p304299 no NCBI prot ID no annotation VI_12099 Gammaproteobacteria_gi_560225766 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p393174 no NCBI prot ID no annotation VI_12096 Gammaproteobacteria_gi_550408608_380_15324 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p304136 no NCBI prot ID no annotation VI_12101 Gammaproteobacteria_gi_550284298 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_028768_p7 YP_009196192.1 hypothetical protein NC_028768 Achromobacter phage JWX Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Steinhofvirus.
NC_028834_p5 YP_009201739.1 hypothetical protein NC_028834 Achromobacter phage 83-24 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Steinhofvirus.
MG018224_p46 ATS92219.1 TerS MG018224 Stenotrophomonas phage DLP4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus.
NC_028809_p1 YP_009199440.1 putative terminase small subunit NC_028809 Pseudomonas phage PaMx74 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus.
KX241618_p10 ANT45232.1 terminase small subunit KX241618 Xanthomonas phage Xoo-sp2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus.
KU204984_p73 AME18098.1 terminase large subunit KU204984 Pseudomonas phage AAT-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus.
NC_028770_p1 YP_009196254.1 putative terminase small subunit NC_028770 Pseudomonas phage PaMx11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abidjanvirus.
NC_026594_p45 YP_009125148.1 hypothetical protein NC_026594 Pseudomonas phage vB_PaeS_PAO1_Ab18 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abidjanvirus.
KU356689_p45 AMD43343.1 hypothetical protein KU356689 Pseudomonas phage ZC01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abidjanvirus; unclassified Abidjanvirus.
p254228 no NCBI prot ID no annotation VI_04346 Alphaproteobacteria_gi_483839739 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_028931_p1 YP_009210613.1 putative terminase small subunit NC_028931 Pseudomonas phage PaMx28 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus.
NC_006938_p58 YP_223982.1 gp58 NC_006938 Phage phiJL001 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2 5795 terminase large subunit head and packaging 28 2.97E-46 36.65
phrog_20 2000 holin lysis 8 3.20E-14 4.62
phrog_671 210 nucleotide pyrophosphohydrolase other 6 2.09E-17 7.8
phrog_6858 17 no annotation unknown function 3 5.53E-14 4.38
phrog_17001 5 endolysin lysis 2 3.43E-12 2.59
phrog_19063 4 no annotation unknown function 2 1.37E-12 2.98

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1482 terminase small subunit head and packaging 97.4 4.7E-07 8-135 / 7-129
phrog_151 transposase integration and excision 90.4 0.056 12-59 / 4-52
phrog_2538 terminase small subunit head and packaging 96.0 0.00016 17-68 / 5-56
phrog_3064 terminase head and packaging 91.8 0.029 35-65 / 90-120
phrog_309 terminase small subunit head and packaging 98.2 1.6E-09 27-135 / 20-137
phrog_3218 terminase small subunit head and packaging 90.0 0.065 11-64 / 15-67
phrog_409 transcriptional regulator transcription regulation 92.7 0.017 31-61 / 11-40
phrog_4102 terminase small subunit head and packaging 95.8 0.00027 13-52 / 9-48
phrog_5334 terminase small subunit head and packaging 90.2 0.06 13-164 / 4-145
phrog_66 excisionase and transcriptional regulator integration and excision 92.2 0.023 33-73 / 12-60
phrog_7344 terminase small subunit head and packaging 93.0 0.014 12-88 / 8-79

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07141.10 Putative bacteriophage terminase small subunit 4.2E-09 123-242 / 7-140
PF16677.4 DNA-packaging protein gp3 1.1E-05 125-178 / 3-64
PF09607.9 Brinker DNA-binding domain 0.0012 128-170 / 6-52
PF02796.14 Helix-turn-helix domain of resolvase 0.004 135-166 / 13-44
PF07750.10 GcrA cell cycle regulator 0.0053 128-168 / 3-44
PF12759.6 InsA C-terminal domain 0.0054 132-166 / 10-44
PF01710.15 Transposase 0.0066 129-168 / 4-43

Annotations of the NCBI proteins of this PHROG


11:terminase small subunit 10:hypothetical protein 1:small terminase 1:protein of an unannotated phage 1:TerS 1:terminase large subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0000150 recombinase activity
GO:0006310 DNA recombination
GO:0003677 DNA binding

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