phrog_4102 is made of 34 protein sequences and is annotated as "terminase small subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
156.41 294 149


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p81025 no NCBI prot ID no annotation VI_00014 SAR406_cluster_bacterium_SCGC_AAA160_C11 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p137557 no NCBI prot ID no annotation VI_04448 Bacilli_gi_218290702 Viruses.
MF140418_p9 ASR83593.1 HTH DNA binding protein MF140418 Arthrobacter phage LiSara Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus.
KU160654_p9 ALY09536.1 HTH DNA binding domain protein KU160654 Arthrobacter phage Laroye Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; Arthrobacter virus Laroye.
MF140427_p9 ASR83890.1 HTH DNA binding domain protein MF140427 Arthrobacter phage Shrooms Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus.
MF140434_p9 ASR84102.1 HTH DNA binding domain protein MF140434 Arthrobacter phage Wheelbite Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus.
KU160664_p9 ALY10177.1 HTH DNA binding domain protein KU160664 Arthrobacter phage Salgado Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus.
KU886268_p75 ANH49251.1 putative DNA binding protein KU886268 Freshwater phage uvFW-CGR-AMD-COM-C203 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
MG099950_p9 ATW59887.1 HTH DNA binding domain protein MG099950 Arthrobacter phage Waltz Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Laroyevirus; unclassified Laroyevirus.
p42526 no NCBI prot ID no annotation VI_11818 Gammaproteobacteria_gi_552950990 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p419927 no NCBI prot ID no annotation VI_11162 Gammaproteobacteria_gi_484176891 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p330889 no NCBI prot ID no annotation VI_05288 Bacilli_gi_484233207 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p254363 no NCBI prot ID no annotation VI_04437 Bacilli_gi_196251034_0_31481 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p378517 no NCBI prot ID no annotation VI_05148 Bacilli_gi_484032088 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p151534 no NCBI prot ID no annotation VI_12464 Spirochaetia_gi_472227124 Viruses.
p153875 no NCBI prot ID no annotation VI_12439 Spirochaetia_gi_523649954 Viruses.
p91965 no NCBI prot ID no annotation VI_12370 Spirochaetia_gi_418745953 Viruses.
p110415 no NCBI prot ID no annotation VI_12462 Spirochaetia_gi_481032833 Viruses.
p202854 no NCBI prot ID no annotation VI_12419 Spirochaetia_gi_410450997 Viruses.
p207856 no NCBI prot ID no annotation VI_12442 Spirochaetia_gi_470906456 Viruses.
p147835 no NCBI prot ID no annotation VI_12347 Spirochaetia_gi_469958679 Viruses.
p409102 no NCBI prot ID no annotation VI_12404 Spirochaetia_gi_470053319 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p229224 no NCBI prot ID no annotation VI_04176 Actinobacteria_gi_484064923_31_33894 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p229267 no NCBI prot ID no annotation VI_04175 Actinobacteria_gi_484063094_9427_43290 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_019713_p84 YP_007111930.1 hypothetical protein NC_019713 Vibrio phage vB_VpaS_MAR10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mardecavirus.
JQ692107_p81 AFE86408.1 hypothetical protein JQ692107 Vibrio phage SSP002 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mardecavirus; Vibrio virus SSP002.
p185519 no NCBI prot ID no annotation VI_04363 Bacilli_gi_223933165_0_37690 Viruses.
KY065467_p30 APD22533.1 hypothetical protein KY065467 Streptococcus phage IPP26 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY065457_p34 APD22003.1 putative HNH endonuclease KY065457 Streptococcus phage IPP16 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY065464_p31 APD22372.1 hypothetical protein KY065464 Streptococcus phage IPP23 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p172592 no NCBI prot ID no annotation VI_04538 Bacilli_gi_417090946 Viruses.
p27418 no NCBI prot ID no annotation VI_00039 Actinobacteria_gi_483966370 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_021537_p8 YP_008126543.1 hypothetical protein NC_021537 Halorubrum phage CGphi46 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p48412 no NCBI prot ID no annotation VI_00872 Bacilli_gi_312977117_201829_259634 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2 5795 terminase large subunit head and packaging 11 1.79E-14 4.87
phrog_38 1538 terminase large subunit head and packaging 10 3.45E-19 9.58
phrog_7405 16 no annotation unknown function 8 3.96E-34 24.52
phrog_9453 11 terminase large subunit head and packaging 7 8.88E-32 22.17
phrog_11826 8 methyltransferase other 6 6.56E-29 19.3
phrog_37613 2 MazG-like pyrophosphatase other 2 0 1000
phrog_36956 2 no annotation unknown function 2 0 1000
phrog_31365 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 91.8 0.028 5-49 / 137-181
phrog_14025 no annotation unknown function 94.6 0.0025 23-51 / 27-55
phrog_1482 terminase small subunit head and packaging 98.9 1.4E-12 2-125 / 5-131
phrog_151 transposase integration and excision 94.3 0.0038 12-54 / 8-51
phrog_15534 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.5 0.053 26-51 / 39-64
phrog_1729 no annotation unknown function 90.0 0.064 12-51 / 70-109
phrog_21036 no annotation unknown function 90.7 0.048 33-50 / 2-19
phrog_24579 terminase small subunit head and packaging 95.9 0.00022 13-101 / 15-99
phrog_2538 terminase small subunit head and packaging 96.7 1.4E-05 14-102 / 6-93
phrog_28310 no annotation unknown function 93.2 0.011 12-51 / 9-48
phrog_3064 terminase head and packaging 90.1 0.062 5-83 / 42-131
phrog_309 terminase small subunit head and packaging 98.9 4E-13 5-121 / 1-135
phrog_3218 terminase small subunit head and packaging 91.6 0.032 18-50 / 25-57
phrog_4044 terminase small subunit head and packaging 95.7 0.00035 9-48 / 13-52
phrog_4494 no annotation unknown function 95.8 0.00031 12-55 / 4-46
phrog_4869 no annotation unknown function 93.7 0.0071 21-80 / 5-70
phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.6 0.051 8-47 / 61-100
phrog_5751 terminase large subunit head and packaging 95.4 0.0007 10-102 / 2-85
phrog_606 terminase small subunit head and packaging 95.5 0.00059 2-82 / 13-110
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 95.3 0.00094 5-53 / 46-95
phrog_66 excisionase and transcriptional regulator integration and excision 94.6 0.0028 27-51 / 10-34
phrog_7344 terminase small subunit head and packaging 90.7 0.048 24-100 / 24-99
phrog_9697 no annotation unknown function 92.5 0.019 6-72 / 5-73

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07141.10 Putative bacteriophage terminase small subunit 6E-07 58-106 / 6-58
PF09607.9 Brinker DNA-binding domain 5.5E-05 61-106 / 3-52
PF01527.19 Transposase 0.00016 63-107 / 4-48
PF12759.6 InsA C-terminal domain 0.00027 64-103 / 6-45
PF00292.17 'Paired box' domain 0.00028 62-107 / 16-61
PF08822.10 Protein of unknown function (DUF1804) 0.0003 64-107 / 3-47
PF01710.15 Transposase 0.00034 64-106 / 3-45
PF16677.4 DNA-packaging protein gp3 0.00037 60-103 / 2-53
PF13011.5 leucine-zipper of insertion element IS481 0.00046 63-107 / 7-52
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.00054 70-107 / 4-41
PF02796.14 Helix-turn-helix domain of resolvase 0.00054 70-102 / 12-44
PF07750.10 GcrA cell cycle regulator 0.00084 64-106 / 3-46
PF10668.8 Phage terminase small subunit 0.00089 63-107 / 4-50
PF06627.10 Protein of unknown function (DUF1153) 0.0011 62-107 / 28-74
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0011 64-103 / 12-50
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0017 65-104 / 8-48
PF05344.10 Domain of Unknown Function (DUF746) 0.0019 77-107 / 10-40
PF13309.5 HTH domain 0.0025 62-101 / 18-63
PF13936.5 Helix-turn-helix domain 0.0027 70-102 / 11-43
PF16087.4 Domain of unknown function (DUF4817) 0.0029 67-107 / 3-52
PF11427.7 Tc3 transposase 0.0031 72-106 / 13-47
PF13518.5 Helix-turn-helix domain 0.0042 72-107 / 5-39
PF04936.11 Protein of unknown function (DUF658) 0.0055 79-106 / 14-41
PF06322.10 Phage NinH protein 0.0061 78-106 / 15-43
PF14493.5 Helix-turn-helix domain 0.0062 72-107 / 5-40

Annotations of the NCBI proteins of this PHROG


5:hypothetical protein 5:HTH DNA binding domain protein 1:HNH endonuclease 1:HTH DNA binding protein 1:DNA binding protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K02912 RP-L32e, RPL32 : large subunit ribosomal protein L32e ko03010 Ribosome 57 1

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0019069 viral capsid assembly
GO:0006355 regulation of transcription, DNA-templated
GO:0004803 transposase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0005524 ATP binding
GO:0006313 transposition, DNA-mediated
GO:0000150 recombinase activity

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