phrog_4151 is made of 34 protein sequences and is annotated as "DNA binding protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
160.18 271 172


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p284557 no NCBI prot ID no annotation VI_05952 Clostridia_gi_544995746 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p423316 no NCBI prot ID no annotation VI_05789 Clostridia_gi_485045194 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p205739 no NCBI prot ID no annotation VI_06089 Clostridia_gi_545036069 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p326628 no NCBI prot ID no annotation VI_05833 Clostridia_gi_544954871 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p212008 no NCBI prot ID no annotation VI_05898 Clostridia_gi_544977890 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p209711 no NCBI prot ID no annotation VI_06066 Clostridia_gi_545030666 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p193347 no NCBI prot ID no annotation VI_00879 Bacilli_gi_507027716 Viruses.
p99118 no NCBI prot ID no annotation VI_00850 Bacilli_gi_558684320 Viruses.
NC_015262_p1 YP_004306102.1 putative terminase small subunit NC_015262 Clostridium phage phiCD6356 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p150408 no NCBI prot ID no annotation VI_00419 Bacilli_gi_423445290 Viruses.
p163531 no NCBI prot ID no annotation VI_01299 Clostridia_gi_331270707 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p210336 no NCBI prot ID no annotation VI_06061 Clostridia_gi_545030157 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p315045 no NCBI prot ID no annotation VI_05837 Clostridia_gi_544956151 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p215227 no NCBI prot ID no annotation VI_06052 Clostridia_gi_545023332 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p175190 no NCBI prot ID no annotation VI_01280 Clostridia_gi_153930785_3101670_3140229 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p126861 no NCBI prot ID no annotation VI_01011 Bacteroidia_gi_260885173 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p231672 no NCBI prot ID no annotation VI_01046 Bacteroidia_gi_484001862 Viruses.
p222511 no NCBI prot ID no annotation VI_01352 Flavobacteriia_gi_484003640 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p126512 no NCBI prot ID no annotation VI_01034 Bacteroidia_gi_547880191 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p352292 no NCBI prot ID no annotation VI_01044 Bacteroidia_gi_483488487 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p278986 no NCBI prot ID no annotation VI_01036 Bacteroidia_gi_547906417 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p174941 no NCBI prot ID no annotation VI_01020 Bacteroidia_gi_224485592 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p148436 no NCBI prot ID no annotation VI_01013 Bacteroidia_gi_325672487 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p253706 no NCBI prot ID no annotation VI_05497 Bacteroidia_gi_484227712 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p210732 no NCBI prot ID no annotation VI_06219 Cytophagia_gi_441500421 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p303592 no NCBI prot ID no annotation VI_01024 Bacteroidia_gi_546368108 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p400760 no NCBI prot ID no annotation VI_01347 Flavobacteriia_gi_444380918 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p297974 no NCBI prot ID no annotation VI_01031 Bacteroidia_gi_547256905 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p414455 no NCBI prot ID no annotation VI_01047 Bacteroidia_gi_484063615 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p57859 no NCBI prot ID no annotation VI_01000 Bacteroidia_gi_545434946 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p262392 no NCBI prot ID no annotation VI_05170 Bacilli_gi_511699586 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p384167 no NCBI prot ID no annotation VI_05178 Bacilli_gi_518697859_0_15863 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p275180 no NCBI prot ID no annotation VI_05813 Clostridia_gi_544690375 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p214692 no NCBI prot ID no annotation VI_06326 Flavobacteriia_gi_213963944 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_38 1538 terminase large subunit head and packaging 16 1.72E-34 24.89
phrog_9 2977 terminase large subunit head and packaging 15 1.83E-27 17.86
phrog_119 757 HNH endonuclease DNA, RNA and nucleotide metabolism 12 5.86E-29 19.35
phrog_5942 21 no annotation unknown function 3 5.92E-14 4.35

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11376 no annotation unknown function 92.3 0.021 19-43 / 57-81
phrog_1157 transposase integration and excision 91.9 0.027 10-47 / 8-43
phrog_1206 terminase small subunit head and packaging 92.7 0.016 14-53 / 10-50
phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 91.3 0.037 16-50 / 13-48
phrog_1373 transcriptional regulator transcription regulation 94.5 0.003 16-42 / 40-66
phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 92.5 0.019 12-42 / 13-45
phrog_14025 no annotation unknown function 96.3 6.7E-05 9-55 / 19-65
phrog_151 transposase integration and excision 94.7 0.0022 18-44 / 21-47
phrog_1553 excisionase integration and excision 93.6 0.0084 21-42 / 5-26
phrog_1558 no annotation unknown function 96.1 0.00013 7-42 / 104-139
phrog_1729 no annotation unknown function 90.7 0.048 21-44 / 85-108
phrog_1740 RNA polymerase sigma factor transcription regulation 93.7 0.0073 8-41 / 130-163
phrog_1889 terminase small subunit head and packaging 97.8 3.1E-08 5-52 / 4-54
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 95.0 0.0015 14-49 / 64-99
phrog_2104 no annotation unknown function 94.5 0.0029 17-51 / 55-89
phrog_23081 no annotation unknown function 95.6 0.00046 9-50 / 3-49
phrog_2308 no annotation unknown function 92.5 0.019 14-45 / 10-41
phrog_2328 transcriptional repressor transcription regulation 94.1 0.0049 11-42 / 19-50
phrog_23746 no annotation unknown function 96.5 3.9E-05 6-53 / 46-93
phrog_2414 no annotation unknown function 91.6 0.032 9-155 / 7-167
phrog_2439 transcriptional regulator transcription regulation 91.6 0.032 17-42 / 16-41
phrog_25288 no annotation unknown function 96.3 5.9E-05 6-75 / 3-81
phrog_2538 terminase small subunit head and packaging 97.0 3.6E-06 11-48 / 9-47
phrog_2606 terminase small subunit head and packaging 97.8 3.1E-08 3-59 / 2-61
phrog_2789 transcriptional regulator transcription regulation 94.6 0.0028 18-59 / 70-111
phrog_2967 transcriptional regulator transcription regulation 91.3 0.036 18-42 / 19-44
phrog_30948 no annotation unknown function 90.9 0.045 11-50 / 10-50
phrog_309 terminase small subunit head and packaging 95.4 0.00076 11-42 / 15-46
phrog_3218 terminase small subunit head and packaging 93.3 0.011 13-44 / 26-57
phrog_351 RNA polymerase sigma factor transcription regulation 90.6 0.051 19-42 / 193-216
phrog_357 transcriptional repressor transcription regulation 94.7 0.0022 16-63 / 20-60
phrog_36038 no annotation unknown function 91.2 0.038 13-54 / 13-55
phrog_36 transcriptional regulator transcription regulation 94.9 0.0017 7-42 / 92-127
phrog_3910 transcriptional regulator transcription regulation 95.2 0.001 4-41 / 63-100
phrog_3 transcriptional repressor transcription regulation 95.8 0.0003 16-42 / 12-38
phrog_409 transcriptional regulator transcription regulation 91.4 0.035 22-59 / 12-49
phrog_4149 no annotation unknown function 94.6 0.0025 12-45 / 4-42
phrog_4481 no annotation unknown function 90.0 0.065 6-89 / 27-104
phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 92.3 0.022 21-46 / 5-30
phrog_4779 transcriptional regulator transcription regulation 96.1 0.00013 11-42 / 5-36
phrog_509 terminase small subunit head and packaging 98.3 8.2E-10 8-52 / 3-47
phrog_5110 terminase small subunit head and packaging 98.9 7.1E-13 61-164 / 6-94
phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.7 0.00036 15-42 / 74-101
phrog_5301 transcriptional repressor transcription regulation 93.3 0.01 20-47 / 23-50
phrog_5536 no annotation unknown function 92.4 0.02 8-43 / 9-44
phrog_5751 terminase large subunit head and packaging 97.3 7.6E-07 10-53 / 8-51
phrog_57 terminase small subunit head and packaging 94.2 0.0044 20-45 / 2-27
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 92.6 0.017 21-40 / 15-35
phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 91.1 0.04 20-48 / 111-139
phrog_609 RIIB lysis inhibitor lysis 94.7 0.0022 6-45 / 8-48
phrog_6156 endonuclease DNA, RNA and nucleotide metabolism 92.9 0.015 16-53 / 30-67
phrog_6223 transcriptional repressor transcription regulation 94.9 0.0019 14-42 / 8-39
phrog_638 transcriptional regulator transcription regulation 92.1 0.024 15-42 / 8-38
phrog_645 Rnase E DNA, RNA and nucleotide metabolism 92.6 0.018 4-42 / 19-57
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 96.1 0.00011 7-51 / 55-99
phrog_66 excisionase and transcriptional regulator integration and excision 95.8 0.00028 21-45 / 10-34
phrog_6831 transcriptional regulator transcription regulation 94.4 0.0033 10-42 / 5-37
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 93.7 0.0071 13-43 / 37-67
phrog_725 CII-like regulator transcription regulation 95.1 0.0013 20-52 / 27-59
phrog_7344 terminase small subunit head and packaging 96.2 0.00011 11-48 / 17-54
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 95.7 0.00038 11-48 / 8-46
phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 97.8 4.5E-08 6-149 / 4-154
phrog_7676 no annotation unknown function 92.2 0.022 19-43 / 15-39
phrog_7950 transcriptional repressor transcription regulation 95.2 0.0011 19-43 / 21-45
phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 91.1 0.041 12-53 / 5-50
phrog_8446 HNH endonuclease DNA, RNA and nucleotide metabolism 96.3 7E-05 9-47 / 5-44
phrog_867 DNA binding domain DNA, RNA and nucleotide metabolism 95.2 0.0011 12-55 / 19-63
phrog_8794 sigma factor transcription regulation 92.7 0.016 4-44 / 4-45
phrog_8 transcriptional regulator transcription regulation 95.1 0.0011 19-43 / 13-36
phrog_9366 transposase integration and excision 90.1 0.061 6-43 / 59-104
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 94.4 0.0035 6-44 / 5-42

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF10654.8 Protein of unknown function (DUF2481) 0.00038 41-77 / 67-103
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.00049 39-78 / 8-47
PF01381.21 Helix-turn-helix 0.00049 50-77 / 5-32
PF09607.9 Brinker DNA-binding domain 0.0016 40-78 / 8-49
PF13413.5 Helix-turn-helix domain 0.0021 49-77 / 4-32
PF07141.10 Putative bacteriophage terminase small subunit 0.0023 51-78 / 28-55
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 0.0023 52-77 / 9-35
PF06322.10 Phage NinH protein 0.0026 46-79 / 8-41
PF00292.17 'Paired box' domain 0.0031 52-79 / 31-58
PF05339.10 Protein of unknown function (DUF739) 0.0034 46-77 / 8-39
PF13744.5 Helix-turn-helix domain 0.0035 41-77 / 18-54
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0037 52-80 / 11-39
PF13443.5 Cro/C1-type HTH DNA-binding domain 0.0044 50-77 / 6-34
PF12844.6 Helix-turn-helix domain 0.0046 50-77 / 8-35
PF13011.5 leucine-zipper of insertion element IS481 0.0049 42-80 / 12-50
PF04645.11 Protein of unknown function, DUF603 0.0055 39-77 / 5-46
PF05344.10 Domain of Unknown Function (DUF746) 0.0059 50-79 / 8-37
PF13309.5 HTH domain 0.0059 55-76 / 42-63
PF04936.11 Protein of unknown function (DUF658) 0.0068 54-80 / 14-40
PF08822.10 Protein of unknown function (DUF1804) 0.0068 46-79 / 11-44
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0075 52-76 / 21-45

Annotations of the NCBI proteins of this PHROG


1:terminase small subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005524 ATP binding
GO:0006355 regulation of transcription, DNA-templated
GO:0043565 sequence-specific DNA binding
GO:0019069 viral capsid assembly
GO:0003677 DNA binding
GO:0045892 negative regulation of transcription, DNA-templated

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