Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
1332.39 | 1642 | 1302 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
MG757154_p64 | AVD99486.1 | DNA primase/polymerase | MG757154 | Streptomyces phage Bing | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bingvirus; Streptomyces virus Bing. |
MF975637_p42 | ATN93691.1 | DNA primase/polymerase | MF975637 | Streptomyces phage Scap1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Scapunavirus; Streptomyces virus Scap1. |
MF140423_p58 | ASM62334.1 | DNA primase/polymerase | MF140423 | Arthrobacter phage Nightmare | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus. |
NC_024208_p53 | YP_009035868.1 | hypothetical protein | NC_024208 | Lactococcus phage P118 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
NC_031224_p58 | YP_009300747.1 | DNA polymerase/primase | NC_031224 | Arthrobacter phage Mudcat | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus. |
MF189171_p58 | ASR80119.1 | DNA polymerase/primase | MF189171 | Arthrobacter phage Correa | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
KU160642_p63 | ALY08747.1 | DNA polymerase/primase | KU160642 | Arthrobacter phage Circum | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; Arthrobacter virus Circum. |
KU160646_p54 | ALY09029.1 | DNA polymerase/primase | KU160646 | Arthrobacter phage Gordon | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; Arthrobacter virus Gordon. |
p25529 | no NCBI prot ID | no annotation | VI_01160 | Clostridia_gi_211596895_66269_137690 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
MF189170_p61 | ASR80024.1 | DNA polymerase/primase | MF189170 | Arthrobacter phage Arcadia | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
KX670789_p60 | AOZ64925.1 | DNA polymerase/primase | KX670789 | Streptomyces phage OlympicHelado | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rimavirus; unclassified Rimavirus. |
MF467949_p60 | ASU04055.1 | DNA polymerase/primase | MF467949 | Streptomyces phage Spectropatronm | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rimavirus; unclassified Rimavirus. |
NC_010576_p55 | YP_001828703.1 | putative helicase | NC_010576 | Lactococcus phage 1706 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
MG962369_p61 | AVO25394.1 | hypothetical protein | MG962369 | Gordonia phage Kerry | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
MF189173_p60 | ASR80314.1 | DNA polymerase/primase | MF189173 | Arthrobacter phage Heisenberger | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
NC_023735_p72 | YP_009017686.1 | gp072 | NC_023735 | Rhodococcus phage ReqiPepy6 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pepyhexavirus. |
MF324906_p61 | ASR84640.1 | DNA polymerase/primase | MF324906 | Arthrobacter phage Cheesy | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
NC_024214_p54 | YP_009036797.1 | hypothetical protein | NC_024214 | Lactococcus phage P162 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
MF140401_p54 | ASR83350.1 | DNA polymerase/primase | MF140401 | Arthrobacter phage Caterpillar | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus. |
MF189175_p63 | ASR80514.1 | DNA polymerase/primase | MF189175 | Arthrobacter phage Tribby | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
MF140432_p57 | ASR84057.1 | DNA polymerase/primase | MF140432 | Arthrobacter phage Teacup | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus. |
MF038790_p56 | ASD52278.1 | DNA polymerae/primase | MF038790 | Arthrobacter phage Niktson | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; unclassified Gordonvirus. |
NC_024215_p51 | YP_009036876.1 | hypothetical protein | NC_024215 | Lactococcus phage P078 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
KU160641_p54 | ALY08654.1 | DNA polymerase/primase | KU160641 | Arthrobacter phage CaptnMurica | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordonvirus; Arthrobacter virus Captnmurica. |
p218742 | no NCBI prot ID | no annotation | VI_01171 | Clostridia_gi_237642738 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
p38944 | no NCBI prot ID | no annotation | VI_01187 | Clostridia_gi_355689648_74587_135725 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_023694_p72 | YP_009012653.1 | gp072 | NC_023694 | Rhodococcus phage ReqiPoco6 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pepyhexavirus. |
p18845 | no NCBI prot ID | no annotation | VI_01149 | Clostridia_gi_324035751_41009_118330 | Viruses. |
KX670790_p61 | AOZ65013.1 | DNA polymerase/primase | KX670790 | Streptomyces phage Rima | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rimavirus; Strepomyces virus Rima. |
MG711463_p28 | AUV56521.1 | helicase/polymerase | MG711463 | Faecalibacterium phage FP_oengus | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Oengusvirus; Faecalibacterium virus Oengus. |
p46461 | no NCBI prot ID | no annotation | VI_01201 | Clostridia_gi_365137247_641329_700297 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
MF467948_p59 | ASU03972.1 | DNA polymerase/primase | MF467948 | Streptomyces phage DrGrey | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rimavirus; Strepomyces virus Drgrey. |
NC_024203_p50 | YP_009035111.1 | hypothetical protein | NC_024203 | Lactococcus phage P092 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_4678 | 29 | no annotation | unknown function | 22 | 3.15E-92 | 82.62 |
phrog_15586 | 6 | no annotation | unknown function | 5 | 1.12E-25 | 16.07 |
phrog_16856 | 5 | no annotation | unknown function | 5 | 0 | 1000 |
phrog_21647 | 4 | no annotation | unknown function | 4 | 0 | 1000 |
phrog_19543 | 4 | no annotation | unknown function | 4 | 0 | 1000 |
phrog_21864 | 4 | no annotation | unknown function | 4 | 0 | 1000 |
phrog_4787 | 28 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 4 | 1.65E-16 | 6.9 |
phrog_14033 | 7 | no annotation | unknown function | 3 | 8.67E-16 | 6.18 |
phrog_19221 | 4 | no annotation | unknown function | 2 | 1.44E-12 | 2.96 |
phrog_33560 | 2 | no annotation | unknown function | 2 | 0 | 1000 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1139 | DNA primase | DNA, RNA and nucleotide metabolism | 96.7 | 1.8E-05 | 137-296 / 504-673 |
phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 99.5 | 1.1E-17 | 120-425 / 460-778 |
phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | 100.0 | 7.3E-36 | 715-1273 / 6-598 |
phrog_14322 | no annotation | unknown function | 92.5 | 0.019 | 174-311 / 195-321 |
phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 99.0 | 2.5E-13 | 119-405 / 446-741 |
phrog_1883 | DNA helicase | DNA, RNA and nucleotide metabolism | 90.8 | 0.047 | 121-303 / 443-628 |
phrog_2071 | ATPase | other | 92.3 | 0.021 | 174-244 / 4-82 |
phrog_2249 | DNA primase | DNA, RNA and nucleotide metabolism | 95.8 | 0.00027 | 165-397 / 505-740 |
phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 93.8 | 0.0067 | 120-417 / 544-850 |
phrog_262 | DNA polymerase | DNA, RNA and nucleotide metabolism | 97.5 | 2.2E-07 | 761-1153 / 185-659 |
phrog_293 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 92.1 | 0.024 | 162-200 / 25-65 |
phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 93.1 | 0.012 | 129-198 / 2-50 |
phrog_36509 | DNA primase | DNA, RNA and nucleotide metabolism | 94.4 | 0.0033 | 165-303 / 566-701 |
phrog_5846 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | 91.6 | 0.032 | 168-201 / 33-66 |
phrog_6088 | DNA primase | DNA, RNA and nucleotide metabolism | 98.7 | 1.1E-11 | 12-401 / 338-758 |
phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 93.3 | 0.01 | 514-582 / 58-126 |
phrog_7485 | no annotation | unknown function | 93.6 | 0.0082 | 177-341 / 231-380 |
phrog_7601 | no annotation | unknown function | 98.7 | 1.1E-11 | 160-401 / 8-254 |
phrog_800 | terminase small subunit | head and packaging | 91.8 | 0.028 | 173-199 / 8-34 |
phrog_8323 | no annotation | unknown function | 90.6 | 0.051 | 172-201 / 48-77 |
phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 99.6 | 1E-19 | 108-418 / 167-498 |
phrog_9172 | no annotation | unknown function | 95.1 | 0.0013 | 174-291 / 98-227 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF00136.20 | DNA polymerase family B | 4.1E-23 | 925-1135 / 43-315 |
PF08490.11 | Domain of unknown function (DUF1744) | 2.9E-12 | 928-1115 / 186-399 |
PF03175.12 | DNA polymerase type B, organellar and viral | 3E-11 | 839-962 / 141-254 |
PF04735.11 | Baculovirus DNA helicase | 2.5E-10 | 141-366 / 863-1120 |
PF03337.12 | Poxvirus F12L protein | 5.8E-09 | 1009-1076 / 551-618 |
PF05272.10 | Virulence-associated protein E | 5.8E-07 | 159-303 / 35-177 |
PF03104.18 | DNA polymerase family B, exonuclease domain | 3.5E-05 | 749-819 / 254-333 |
PF06048.10 | Domain of unknown function (DUF927) | 7.3E-05 | 28-204 / 54-215 |
PF10108.8 | Predicted 3'-5' exonuclease related to the exonuclease domain of PolB | 0.0003 | 749-862 / 53-174 |
PF00519.16 | Papillomavirus helicase | 0.00052 | 177-303 / 262-382 |
PF01057.16 | Parvovirus non-structural protein NS1 | 0.00084 | 176-302 / 117-242 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
K02327 | POLD1 : DNA polymerase delta subunit 1 [EC:2.7.7.7] | ko00230 Purine metabolism ko00240 Pyrimidine metabolism ko03030 DNA replication ko03410 Base excision repair ko03420 Nucleotide excision repair ko03430 Mismatch repair ko03440 Homologous recombination ko05166 HTLV-I infection |
61 | 1 |
K06919 | K06919 : putative DNA primase/helicase | no pathways | 59 | 3 |
ID | Definition |
---|---|
GO:0000166 | nucleotide binding |
GO:0004003 | ATP-dependent DNA helicase activity |
GO:0003887 | DNA-directed DNA polymerase activity |
GO:0006260 | DNA replication |
GO:0003678 | DNA helicase activity |
GO:0003677 | DNA binding |
GO:0008270 | zinc ion binding |
GO:0019079 | viral genome replication |
GO:0005524 | ATP binding |
GO:0005634 | nucleus |
GO:0016032 | viral process |