phrog_4707 is made of 29 protein sequences and is annotated as "replication initiation protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
418.79 581 478


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p48569 no NCBI prot ID no annotation VI_12457 Spirochaetia_gi_481018194 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p43735 no NCBI prot ID no annotation VI_12381 Spirochaetia_gi_470034064 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p54566 no NCBI prot ID no annotation VI_12444 Spirochaetia_gi_475910415 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p61359 no NCBI prot ID no annotation VI_12371 Spirochaetia_gi_418747329 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p100812 no NCBI prot ID no annotation VI_12396 Spirochaetia_gi_483585405 Viruses.
p47044 no NCBI prot ID no annotation VI_12372 Spirochaetia_gi_470002519 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p11501 no NCBI prot ID no annotation VI_12341 Spirochaetia_gi_410942028 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p21305 no NCBI prot ID no annotation VI_12400 Spirochaetia_gi_483610574 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p80478 no NCBI prot ID no annotation VI_12346 Spirochaetia_gi_537808464 Viruses.
p31853 no NCBI prot ID no annotation VI_12361 Spirochaetia_gi_469985581 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p34171 no NCBI prot ID no annotation VI_12402 Spirochaetia_gi_470038799 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p28873 no NCBI prot ID no annotation VI_12412 Spirochaetia_gi_421100964 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p350684 no NCBI prot ID no annotation VI_12359 Spirochaetia_gi_469985170 Viruses.
p17754 no NCBI prot ID no annotation VI_12345 Spirochaetia_gi_537815031 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p55029 no NCBI prot ID no annotation VI_12418 Spirochaetia_gi_421113879 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
KF114877_p29 AGS80623.1 hypothetical protein KF114877 Leptospira phage vB_LnoZ_CZ214-LE1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
p77212 no NCBI prot ID no annotation VI_12401 Spirochaetia_gi_483618573 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
KF114876_p14 AGS80540.1 hypothetical protein KF114876 Leptospira phage vB_LalZ_80412-LE1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
p24701 no NCBI prot ID no annotation VI_12380 Spirochaetia_gi_470028642 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p258199 no NCBI prot ID no annotation VI_12417 Spirochaetia_gi_469913730 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p52520 no NCBI prot ID no annotation VI_12394 Spirochaetia_gi_452719472_3111_58974 Viruses.
p363959 no NCBI prot ID no annotation VI_12416 Spirochaetia_gi_469912333 Viruses.
p290599 no NCBI prot ID no annotation VI_12454 Spirochaetia_gi_481017960 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p50416 no NCBI prot ID no annotation VI_12441 Spirochaetia_gi_458810665 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p10204 no NCBI prot ID no annotation VI_12403 Spirochaetia_gi_470044574 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p204782 no NCBI prot ID no annotation VI_12447 Spirochaetia_gi_480994577 Viruses.
p55732 no NCBI prot ID no annotation VI_12435 Spirochaetia_gi_523647283 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p421946 no NCBI prot ID no annotation VI_12374 Spirochaetia_gi_470007918 Viruses.
KF114880_p9 AGS80879.1 hypothetical protein KF114880 Leptospira phage vB_LinZ_10-LE1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_4662 29 no annotation unknown function 20 2.29E-85 75.76
phrog_4799 28 no annotation unknown function 16 6.76E-67 57.29
phrog_8654 13 no annotation unknown function 2 4.90E-11 1.43
phrog_8652 13 no annotation unknown function 2 4.90E-11 1.43

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11718 no annotation unknown function 99.1 4.8E-14 6-103 / 2-101
phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 97.1 2.2E-06 37-100 / 1-63
phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 96.3 6.7E-05 12-105 / 3-105
phrog_22134 no annotation unknown function 97.8 2.7E-08 18-95 / 1-76
phrog_23508 no annotation unknown function 91.4 0.036 18-101 / 20-103
phrog_23842 no annotation unknown function 94.8 0.0021 6-129 / 13-136
phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 93.7 0.0077 14-99 / 3-87
phrog_27492 no annotation unknown function 96.6 2.5E-05 7-84 / 15-93
phrog_2880 replication initiation protein DNA, RNA and nucleotide metabolism 97.9 2.2E-08 290-452 / 144-314
phrog_37920 HTH DNA binding protein DNA, RNA and nucleotide metabolism 98.5 1.4E-10 7-94 / 2-89
phrog_4221 replication initiation protein DNA, RNA and nucleotide metabolism 94.5 0.003 11-114 / 8-112
phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 97.6 1.4E-07 9-93 / 6-92
phrog_9545 HNH endonuclease DNA, RNA and nucleotide metabolism 94.7 0.0024 18-91 / 17-97

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF06970.10 Replication initiator protein A (RepA) N-terminus 3.5E-05 19-76 / 1-75
PF04492.12 Bacteriophage replication protein O 0.00021 17-86 / 6-83
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0028 33-85 / 5-56
PF01726.15 LexA DNA binding domain 0.0035 34-86 / 5-60
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 0.0052 33-85 / 11-60
PF05732.10 Firmicute plasmid replication protein (RepL) 0.0058 25-86 / 44-109
PF12802.6 MarR family 0.006 34-87 / 4-56
PF16221.4 winged helix-turn-helix 0.0064 36-84 / 32-78

Annotations of the NCBI proteins of this PHROG


3:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0004252 serine-type endopeptidase activity
GO:0005667 transcription factor complex
GO:0006508 proteolysis
GO:0006260 DNA replication
GO:0006276 plasmid maintenance
GO:0003700 DNA binding transcription factor activity
GO:0006355 regulation of transcription, DNA-templated

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