phrog_4836 is made of 28 protein sequences and is annotated as "CII-like regulator"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
184.75 271 219


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p13677 no NCBI prot ID no annotation VI_07483 Gammaproteobacteria_gi_452702270_0_84541 Viruses.
p367003 no NCBI prot ID no annotation VI_07491 Gammaproteobacteria_gi_452702652 Viruses.
p96224 no NCBI prot ID no annotation VI_07122 Gammaproteobacteria_gi_417154139_975617_1021136 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lambdavirus; unclassified Lambdavirus.
p344567 no NCBI prot ID no annotation VI_11415 Gammaproteobacteria_gi_544880712 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p421115 no NCBI prot ID no annotation VI_07497 Gammaproteobacteria_gi_452703256 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p379304 no NCBI prot ID no annotation VI_11413 Gammaproteobacteria_gi_544880368 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p280704 no NCBI prot ID no annotation VI_02146 Gammaproteobacteria_gi_425248397 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p91933 no NCBI prot ID no annotation VI_03876 Gammaproteobacteria_gi_260866153_2394403_2440474 Viruses.
p61979 no NCBI prot ID no annotation VI_03870 Gammaproteobacteria_gi_260842239_2144101_2195509 Viruses.
p221796 no NCBI prot ID no annotation VI_07112 Gammaproteobacteria_gi_417124260_517_35180 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p379891 no NCBI prot ID no annotation VI_09378 Gammaproteobacteria_gi_421825258 Viruses.
p236097 no NCBI prot ID no annotation VI_08681 Gammaproteobacteria_gi_420319205 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p239558 no NCBI prot ID no annotation VI_07110 Gammaproteobacteria_gi_417119087_426553_459374 Viruses.
p400633 no NCBI prot ID no annotation VI_10915 Gammaproteobacteria_gi_487471685 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Enterobacteria phage phiP27.
p374098 no NCBI prot ID no annotation VI_07341 Gammaproteobacteria_gi_417826769 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p140191 no NCBI prot ID no annotation VI_01698 Gammaproteobacteria_gi_545268293_2025070_2066848 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p273941 no NCBI prot ID no annotation VI_07680 Gammaproteobacteria_gi_478762663_112901_142414 Viruses.
p339616 no NCBI prot ID no annotation VI_06353 Gammaproteobacteria_gi_193065440_0_21192 Viruses; unclassified bacterial viruses.
p381013 no NCBI prot ID no annotation VI_01862 Gammaproteobacteria_gi_301033810_210_16258 Viruses.
p393587 no NCBI prot ID no annotation VI_09710 Gammaproteobacteria_gi_445012701 Viruses.
p324495 no NCBI prot ID no annotation VI_07275 Gammaproteobacteria_gi_417623676_0_22873 Viruses.
p340625 no NCBI prot ID no annotation VI_07182 Gammaproteobacteria_gi_417263098_0_21114 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Enterobacteria phage phiP27.
p172552 no NCBI prot ID no annotation VI_03672 Gammaproteobacteria_gi_510899603_3686141_3724910 Viruses.
p138451 no NCBI prot ID no annotation VI_07477 Gammaproteobacteria_gi_418300889_2236016_2277962 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p283638 no NCBI prot ID no annotation VI_06366 Gammaproteobacteria_gi_193071334 Viruses.
p199543 no NCBI prot ID no annotation VI_11453 Gammaproteobacteria_gi_546172769_56427_93111 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p212559 no NCBI prot ID no annotation VI_07536 Gammaproteobacteria_gi_543945158_49364_84862 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p207642 no NCBI prot ID no annotation VI_08276 Gammaproteobacteria_gi_409167369 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_4 3265 transcriptional repressor transcription regulation 21 2.60E-41 31.71
phrog_4587 30 no annotation unknown function 18 3.43E-76 66.59
phrog_5736 22 transcriptional regulator transcription regulation 4 8.20E-18 8.21
phrog_5451 24 no annotation unknown function 3 6.93E-14 4.28

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1124 transcriptional regulator transcription regulation 91.8 0.029 85-125 / 9-51
phrog_1373 transcriptional regulator transcription regulation 97.7 6.3E-08 83-142 / 32-91
phrog_14076 transcriptional regulator transcription regulation 96.7 1.5E-05 86-119 / 5-41
phrog_147 transcriptional regulator transcription regulation 96.3 7.6E-05 82-149 / 2-71
phrog_16553 transcriptional repressor transcription regulation 95.2 0.00095 93-129 / 20-58
phrog_1668 tail assembly protein tail 92.9 0.015 79-132 / 6-56
phrog_17822 no annotation unknown function 96.0 0.00015 81-154 / 6-78
phrog_19579 transcriptional regulator transcription regulation 91.2 0.039 90-142 / 10-62
phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 93.9 0.0058 85-146 / 2-63
phrog_2104 no annotation unknown function 97.4 6.2E-07 82-124 / 45-87
phrog_2328 transcriptional repressor transcription regulation 98.5 1.5E-10 77-146 / 9-79
phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.041 81-142 / 23-85
phrog_2439 transcriptional regulator transcription regulation 97.8 3.1E-08 84-145 / 8-69
phrog_25567 no annotation unknown function 90.3 0.056 86-131 / 55-101
phrog_2967 transcriptional regulator transcription regulation 98.2 1.4E-09 80-149 / 6-76
phrog_296 DNA transposition protein integration and excision 92.5 0.018 84-121 / 3-40
phrog_3037 transcriptional repressor transcription regulation 91.1 0.042 83-149 / 26-81
phrog_3557 transcriptional regulator transcription regulation 91.1 0.041 84-148 / 15-78
phrog_35 transcriptional repressor transcription regulation 92.6 0.018 96-130 / 14-48
phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.5 0.019 94-142 / 19-67
phrog_37751 no annotation unknown function 93.3 0.011 84-123 / 138-179
phrog_38027 transcriptional repressor transcription regulation 93.3 0.01 84-142 / 59-117
phrog_3949 transcriptional repressor transcription regulation 91.0 0.042 82-149 / 18-83
phrog_3 transcriptional repressor transcription regulation 98.2 1.2E-09 83-144 / 4-65
phrog_4031 no annotation unknown function 93.1 0.013 77-140 / 510-574
phrog_409 transcriptional regulator transcription regulation 93.9 0.0063 89-123 / 5-36
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 90.5 0.052 91-117 / 16-42
phrog_4441 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.9 0.0017 97-146 / 20-69
phrog_4583 transcriptional repressor transcription regulation 93.4 0.0096 80-147 / 8-75
phrog_4587 no annotation unknown function 91.9 0.027 24-69 / 13-58
phrog_4739 no annotation unknown function 100.0 8.7E-44 81-182 / 66-167
phrog_4779 transcriptional regulator transcription regulation 96.3 7.3E-05 85-125 / 4-44
phrog_4 transcriptional repressor transcription regulation 97.7 5.6E-08 83-149 / 4-66
phrog_5119 no annotation unknown function 93.0 0.013 84-120 / 55-91
phrog_5823 transcriptional regulator transcription regulation 96.4 4E-05 80-147 / 2-70
phrog_6106 no annotation unknown function 93.2 0.011 86-121 / 14-49
phrog_6378 no annotation unknown function 90.5 0.052 77-149 / 3-75
phrog_638 transcriptional regulator transcription regulation 95.4 0.0007 87-148 / 7-69
phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.6 0.018 86-143 / 24-89
phrog_6499 transcriptional regulator transcription regulation 94.1 0.0048 79-137 / 3-67
phrog_66 excisionase and transcriptional regulator integration and excision 90.9 0.045 95-118 / 9-32
phrog_6962 no annotation unknown function 95.9 0.00022 85-140 / 4-56
phrog_7241 transcriptional regulator transcription regulation 96.7 1.8E-05 85-142 / 64-121
phrog_725 CII-like regulator transcription regulation 94.4 0.0035 91-139 / 23-68
phrog_7950 transcriptional repressor transcription regulation 96.8 8.4E-06 85-118 / 12-45
phrog_8 transcriptional regulator transcription regulation 98.6 2.6E-11 83-149 / 2-66
phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.1 0.0052 81-121 / 35-75
phrog_9908 DNA binding protein DNA, RNA and nucleotide metabolism 92.2 0.023 83-137 / 15-69

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0004 166-221 / 18-80
PF01381.21 Helix-turn-helix 4.9E-05 168-216 / 6-55
PF13744.5 Helix-turn-helix domain 0.00011 168-217 / 28-79
PF13413.5 Helix-turn-helix domain 0.00064 168-215 / 6-60
PF05339.10 Protein of unknown function (DUF739) 0.00018 168-218 / 13-64
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 8.9E-05 170-221 / 10-62
PF13443.5 Cro/C1-type HTH DNA-binding domain 6.2E-05 168-220 / 7-63
PF12844.6 Helix-turn-helix domain 0.00014 169-220 / 10-62
PF13560.5 Helix-turn-helix domain 0.002 168-216 / 11-63
PF14590.5 Domain of unknown function (DUF4447) 0.00084 168-221 / 17-74
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 0.0053 168-218 / 79-129
PF04645.11 Protein of unknown function, DUF603 0.0073 167-218 / 16-68
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 0.00058 173-220 / 10-58
PF08667.9 BetR domain 0.0028 168-221 / 15-73
PF08965.9 Domain of unknown function (DUF1870) 0.00019 96-147 / 3-56
PF05269.10 Bacteriophage CII protein 0.0017 168-223 / 20-74
PF14549.5 DNA-binding transcriptional regulator Cro 0.0069 168-218 / 7-54
PF13693.5 Winged helix-turn-helix DNA-binding 0.0055 168-220 / 12-62
PF12116.7 Stage III sporulation protein D 0.00094 105-148 / 17-61
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 0.0011 95-146 / 114-165
PF00157.16 Pou domain - N-terminal to homeobox domain 0.0012 93-147 / 6-64
PF00356.20 Bacterial regulatory proteins, lacI family 0.0012 109-138 / 1-30
PF10654.8 Protein of unknown function (DUF2481) 0.0023 104-131 / 77-104
PF04936.11 Protein of unknown function (DUF658) 0.0036 107-196 / 14-113
PF02376.14 CUT domain 0.004 92-153 / 5-65

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-templated
GO:0003700 DNA binding transcription factor activity
GO:0045893 positive regulation of transcription, DNA-templated
GO:0003677 DNA binding
GO:0045892 negative regulation of transcription, DNA-templated
GO:0043565 sequence-specific DNA binding

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