phrog_4873 is made of 27 protein sequences and is annotated as "Ku-like DNA end binding"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
284.07 330 282


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_004685_p87 NP_817938.1 gp87 NC_004685 Mycobacterium virus Corndog Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus.
MH020246_p86 AVP42741.1 dsDNA break-binding protein MH020246 Mycobacterium phage SchoolBus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
MG872838_p86 AVI04117.1 dsDNA break-binding protein MG872838 Mycobacterium phage JangDynasty Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
KT281796_p86 ALA48928.1 Ku protein KT281796 Mycobacterium phage Zakhe101 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
NC_022325_p87 YP_008530651.1 Ku protein NC_022325 Mycobacterium phage Dylan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
NC_023712_p91 YP_009014454.1 gp91 NC_023712 Mycobacterium virus Firecracker Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus.
KJ829260_p88 AII28327.1 Ku-like protein KJ829260 Mycobacterium phage YungJamal Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
MG099943_p88 ATW60570.1 dsDNA break-binding protein MG099943 Mycobacterium phage Familton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
NC_022057_p87 YP_008409256.1 Ku protein NC_022057 Mycobacterium phage Catdawg Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus.
NC_028876_p208 YP_009205338.1 Ku protein NC_028876 Mycobacterium phage Ariel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
p148147 no NCBI prot ID no annotation VI_04137 Actinobacteria_gi_484024199 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
MF919534_p201 ATS93041.1 Ku dsDNA break-binding protein MF919534 Mycobacterium phage Superphikiman Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
JF937090_p209 AEK08262.1 Ku JF937090 Mycobacterium virus Baka Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.
NC_023738_p179 YP_009018190.1 gp181 NC_023738 Mycobacterium phage Thibault Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.
MF919504_p201 ATN89007.1 Ku dsDNA break-binding protein MF919504 Mycobacterium phage DmpstrDiver Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
NC_022066_p195 YP_008410353.1 DNA end binding protein NC_022066 Mycobacterium phage Redno2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
JF937101_p203 AEK09581.1 Ku JF937101 Mycobacterium virus Littlee Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.
NC_028953_p211 YP_009213428.1 DNA binding domain Ku protein NC_028953 Mycobacterium phage MiaZeal Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
NC_022067_p199 YP_009046998.1 Ku protein NC_022067 Mycobacterium phage Wanda Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
MF072690_p201 ASD50812.1 Ku dsDNA break-binding protein MF072690 Mycobacterium phage Porcelain Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
MF668284_p199 ASZ74275.1 dsDNA break-binding protein MF668284 Mycobacterium phage Squint Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
JF957059_p196 AEJ92278.1 Ku protein JF957059 Mycobacterium virus Optimus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.
MF133445_p198 ASD53591.1 DNA binding domain Ku protein MF133445 Mycobacterium phage Lucky2013 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
NC_023690_p205 YP_009012104.1 gp207 NC_023690 Mycobacterium virus Courthouse Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.
MF919512_p207 ATN89914.1 Ku dsDNA break-binding protein MF919512 Mycobacterium phage Klein Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
NC_026584_p201 YP_009124154.1 Ku protein NC_026584 Mycobacterium phage Minerva Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus; unclassified Omegavirus.
NC_004688_p205 NP_818506.1 gp206 NC_004688 Mycobacterium virus Omega Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Omegavirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_10058 10 no annotation unknown function 10 0 1000
phrog_5798 22 no annotation unknown function 9 1.31E-37 28.0
phrog_12859 8 no annotation unknown function 8 0 1000
phrog_2511 58 HTH DNA binding protein DNA, RNA and nucleotide metabolism 5 1.26E-18 9.02
phrog_7603 15 no annotation unknown function 5 1.56E-22 12.93
phrog_27784 3 no annotation unknown function 3 0 1000
phrog_11365 9 no annotation unknown function 2 1.62E-11 1.91
phrog_19782 4 no annotation unknown function 2 7.71E-13 3.23
phrog_17118 5 no annotation unknown function 2 1.93E-12 2.84

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 94.6 0.0027 246-280 / 71-105
phrog_31427 no annotation unknown function 94.7 0.0023 240-278 / 101-139

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF02735.15 Ku70/Ku80 beta-barrel domain 1.2E-31 14-177 / 4-166
PF11774.7 Lsr2 1.6E-09 259-298 / 76-111

Annotations of the NCBI proteins of this PHROG


7:Ku protein 4:dsDNA break-binding protein 4:Ku 4:Ku dsDNA break-binding protein 2:DNA binding domain Ku protein 2:hypothetical protein 1:protein of an unannotated phage 1:Ku-like protein 1:DNA end binding protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K10979 ku : DNA end-binding protein Ku ko03450 Non-homologous end-joining 244 27

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006303 double-strand break repair via nonhomologous end joining
GO:0003677 DNA binding

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