phrog_5229 is made of 25 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
124.4 137 127


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p133327 no NCBI prot ID no annotation VI_00839 Bacilli_gi_386045634_2359202_2401508 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p153061 no NCBI prot ID no annotation VI_04361 Bacilli_gi_47092373_35639_76172 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p131007 no NCBI prot ID no annotation VI_04391 Bacilli_gi_197920146 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_009815_p54 YP_001468894.1 gp54 NC_009815 Listeria phage A006 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_003216_p65 NP_463526.1 gp61 NC_003216 Listeria phage A118 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p216932 no NCBI prot ID no annotation VI_00802 Bacilli_gi_284800255_2477841_2512950 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
NC_009810_p58 YP_001468444.1 gp59 NC_009810 Listeria phage A500 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p216172 no NCBI prot ID no annotation VI_04389 Bacilli_gi_197920088_489040_524185 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p167772 no NCBI prot ID no annotation VI_00867 Bacilli_gi_16799079_2406683_2445916 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p152589 no NCBI prot ID no annotation VI_04360 Bacilli_gi_47095974_43_40624 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p191871 no NCBI prot ID no annotation VI_00855 Bacilli_gi_525934212_2389375_2426437 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p192191 no NCBI prot ID no annotation VI_00856 Bacilli_gi_525896797_788234_825281 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p204664 no NCBI prot ID no annotation VI_00838 Bacilli_gi_386045634_2682391_2718615 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p154451 no NCBI prot ID no annotation VI_00852 Bacilli_gi_525916939_1072721_1113121 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_024384_p20 YP_009044666.1 DUF2481 domain-containing protein NC_024384 Listeria phage LP-030-3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_028929_p67 YP_009210515.1 hypothetical protein NC_028929 Listeria phage vB_LmoS_293 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p204723 no NCBI prot ID no annotation VI_04390 Bacilli_gi_197920144_35141_71365 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p367049 no NCBI prot ID no annotation VI_04381 Bacilli_gi_197918713 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p315494 no NCBI prot ID no annotation VI_04386 Bacilli_gi_300766274 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p216875 no NCBI prot ID no annotation VI_00803 Bacilli_gi_284993440_2444572_2479681 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.
p333210 no NCBI prot ID no annotation VI_04387 Bacilli_gi_300766310 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_028871_p56 YP_009204899.1 hypothetical protein NC_028871 Listeria phage vB_LmoS_188 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p135113 no NCBI prot ID no annotation VI_04378 Bacilli_gi_197326955_40906_83132 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p140848 no NCBI prot ID no annotation VI_00999 Bacilli_gi_16802048_2360689_2402391 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p191936 no NCBI prot ID no annotation VI_00857 Bacilli_gi_525929673_2120850_2157912 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_190 562 Holliday junction resolvase DNA, RNA and nucleotide metabolism 19 1.61E-51 41.92
phrog_7279 16 no annotation unknown function 11 2.85E-49 39.67
phrog_4556 30 no annotation unknown function 7 2.47E-28 18.73
phrog_19625 4 no annotation unknown function 3 7.75E-18 8.23
phrog_19831 4 no annotation unknown function 2 6.07E-13 3.34

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10624 no annotation unknown function 90.7 0.049 76-101 / 21-46
phrog_11376 no annotation unknown function 95.9 0.00025 64-107 / 41-84
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 92.1 0.024 71-107 / 148-184
phrog_1373 transcriptional regulator transcription regulation 94.8 0.0019 77-103 / 40-66
phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 91.1 0.041 80-106 / 22-48
phrog_15357 no annotation unknown function 93.7 0.0071 79-102 / 39-62
phrog_16553 transcriptional repressor transcription regulation 93.7 0.0074 75-102 / 16-43
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 91.5 0.033 66-103 / 55-92
phrog_2308 no annotation unknown function 90.7 0.049 75-113 / 10-48
phrog_2328 transcriptional repressor transcription regulation 91.6 0.031 76-107 / 23-54
phrog_2538 terminase small subunit head and packaging 90.9 0.045 80-113 / 18-49
phrog_309 terminase small subunit head and packaging 95.6 0.00047 65-105 / 9-48
phrog_323 transcriptional regulator, D5-like transcription regulation 91.9 0.028 64-111 / 48-94
phrog_3512 sigma factor transcription regulation 91.4 0.035 65-116 / 60-126
phrog_357 transcriptional repressor transcription regulation 92.5 0.019 64-102 / 7-45
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 96.0 0.00018 67-104 / 65-102
phrog_4583 transcriptional repressor transcription regulation 90.0 0.064 76-99 / 18-41
phrog_57 terminase small subunit head and packaging 90.8 0.046 81-108 / 2-29
phrog_6223 transcriptional repressor transcription regulation 94.2 0.0043 80-117 / 16-55
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 90.7 0.05 75-111 / 62-98
phrog_66 excisionase and transcriptional regulator integration and excision 90.4 0.055 82-106 / 10-34
phrog_6831 transcriptional regulator transcription regulation 94.8 0.002 75-102 / 9-36
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 93.8 0.0067 80-111 / 17-48
phrog_8 transcriptional regulator transcription regulation 92.2 0.023 80-104 / 13-36

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF10654.8 Protein of unknown function (DUF2481) 7.1E-14 9-132 / 1-124
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 2.6E-05 83-130 / 8-55
PF07141.10 Putative bacteriophage terminase small subunit 0.00018 78-115 / 21-58
PF13011.5 leucine-zipper of insertion element IS481 0.00028 86-117 / 22-53
PF00292.17 'Paired box' domain 0.00043 74-116 / 19-61
PF07750.10 GcrA cell cycle regulator 0.00044 75-115 / 5-46
PF08822.10 Protein of unknown function (DUF1804) 0.00048 76-117 / 6-48
PF09607.9 Brinker DNA-binding domain 0.00052 74-115 / 7-52
PF10668.8 Phage terminase small subunit 0.00056 88-120 / 22-54
PF02796.14 Helix-turn-helix domain of resolvase 0.00057 85-111 / 18-44
PF12759.6 InsA C-terminal domain 0.00065 80-112 / 13-45
PF07638.10 ECF sigma factor 0.0011 80-118 / 141-179
PF01710.15 Transposase 0.0012 77-114 / 7-44
PF16677.4 DNA-packaging protein gp3 0.0012 87-112 / 28-53
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.0015 76-117 / 43-84
PF05344.10 Domain of Unknown Function (DUF746) 0.0016 86-117 / 10-41
PF13551.5 Winged helix-turn helix 0.0017 86-120 / 9-43
PF06627.10 Protein of unknown function (DUF1153) 0.0027 76-121 / 33-79
PF05331.10 Protein of unknown function (DUF742) 0.0031 75-117 / 41-82
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0031 88-114 / 23-49
PF16509.4 TrfB plasmid transcriptional repressor 0.0032 81-119 / 24-62
PF13518.5 Helix-turn-helix domain 0.004 87-119 / 10-42
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0044 87-117 / 18-48
PF11427.7 Tc3 transposase 0.0045 85-114 / 17-46
PF13936.5 Helix-turn-helix domain 0.0045 83-111 / 15-43
PF04936.11 Protein of unknown function (DUF658) 0.0049 88-114 / 14-40
PF13309.5 HTH domain 0.0049 89-110 / 42-63
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0054 85-112 / 24-50
PF06322.10 Phage NinH protein 0.0059 87-117 / 15-45
PF08004.10 Protein of unknown function (DUF1699) 0.0068 64-109 / 74-129
PF06530.11 Phage antitermination protein Q 0.0077 77-120 / 68-111
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.0078 72-113 / 88-132
PF14493.5 Helix-turn-helix domain 0.0085 85-116 / 9-40

Annotations of the NCBI proteins of this PHROG


5:hypothetical protein 1:DUF2481 domain-containing protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0000150 recombinase activity
GO:0005524 ATP binding
GO:0006355 regulation of transcription, DNA-templated
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0019069 viral capsid assembly

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