phrog_5238 is made of 25 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
88.64 105 85


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p258027 no NCBI prot ID no annotation VI_05426 Bacilli_gi_565854653 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p103402 no NCBI prot ID no annotation VI_05429 Bacilli_gi_565866318 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Streptococcus phage EJ-1.
KY065449_p18 APD21537.1 hypothetical protein KY065449 Streptococcus phage IPP5 .
p135200 no NCBI prot ID no annotation VI_04834 Bacilli_gi_383939350 Viruses.
p202247 no NCBI prot ID no annotation VI_05325 Bacilli_gi_544772894 Viruses.
p131531 no NCBI prot ID no annotation VI_05428 Bacilli_gi_565858025_8013_50395 Viruses.
p279727 no NCBI prot ID no annotation VI_04509 Bacilli_gi_307710001_0_28645 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Streptococcus phage SM1.
p164466 no NCBI prot ID no annotation VI_04844 Bacilli_gi_419800480_51741_91277 Viruses.
p125527 no NCBI prot ID no annotation VI_05380 Bacilli_gi_553743934 Viruses; unclassified bacterial viruses.
p142296 no NCBI prot ID no annotation VI_00753 Bacilli_gi_28894912_625045_666606 Viruses; unclassified bacterial viruses.
p136910 no NCBI prot ID no annotation VI_00984 Bacilli_gi_71902667_1227073_1269153 Viruses; unclassified bacterial viruses.
p427408 no NCBI prot ID no annotation VI_04944 Bacilli_gi_452727184 Viruses.
p260669 no NCBI prot ID no annotation VI_05397 Bacilli_gi_553746314_0_30920 Viruses; unclassified bacterial viruses.
p216306 no NCBI prot ID no annotation VI_05393 Bacilli_gi_553746034_14259_49378 Viruses.
p163354 no NCBI prot ID no annotation VI_00762 Bacilli_gi_50913346_35574_75249 Viruses; unclassified bacterial viruses.
p166364 no NCBI prot ID no annotation VI_05128 Bacilli_gi_481028052 Viruses.
p177971 no NCBI prot ID no annotation VI_04954 Bacilli_gi_544641250_21_38283 Viruses.
p52872 no NCBI prot ID no annotation VI_00949 Bacilli_gi_512543719_619918_675626 Viruses.
p175321 no NCBI prot ID no annotation VI_05271 Bacilli_gi_499123038 Viruses.
NC_004589_p7 NP_795666.1 hypothetical protein NC_004589 Streptococcus phage 315.6 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p141759 no NCBI prot ID no annotation VI_00995 Bacilli_gi_94989509_1254657_1296251 Viruses; unclassified bacterial viruses.
p156699 no NCBI prot ID no annotation VI_04933 Bacilli_gi_452726509_5707_45963 Viruses.
p142405 no NCBI prot ID no annotation VI_00752 Bacilli_gi_21909536_1230279_1271840 Viruses; unclassified bacterial viruses.
p156782 no NCBI prot ID no annotation VI_00437 Bacilli_gi_306828415 Viruses; unclassified bacterial viruses.
p173680 no NCBI prot ID no annotation VI_05127 Bacilli_gi_481028027_34357_73011 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3050 47 no annotation unknown function 11 4.95E-43 33.43
phrog_1490 101 lipoprotein other 6 3.37E-21 11.59
phrog_1022 145 no annotation unknown function 5 6.02E-17 7.34
phrog_17628 5 no annotation unknown function 4 1.34E-22 13.0
phrog_2317 65 no annotation unknown function 3 2.26E-12 2.77

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10458 no annotation unknown function 94.0 0.0054 2-77 / 4-84
phrog_57 terminase small subunit head and packaging 90.9 0.044 34-80 / 1-50

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF11112.7 Pyocin activator protein PrtN 1.4E-10 37-90 / 10-71
PF12964.6 Protein of unknown function (DUF3853) 2.4E-10 36-87 / 41-95
PF07618.10 Protein of unknown function (DUF1580) 1.3E-09 42-88 / 4-56
PF06806.11 Putative excisionase (DUF1233) 2.1E-09 37-88 / 6-69
PF10743.8 Regulatory phage protein cox 8.2E-09 37-95 / 8-73
PF09035.9 Excisionase from transposon Tn916 9.7E-09 37-89 / 12-67
PF12728.6 Helix-turn-helix domain 2.7E-08 41-88 / 2-51
PF13591.5 MerR HTH family regulatory protein 4.3E-08 41-85 / 1-46
PF07825.10 Excisionase-like protein 6.2E-08 40-81 / 2-48
PF07471.11 Phage DNA packaging protein Nu1 1.1E-07 40-91 / 2-59
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 6.2E-07 39-85 / 2-52
PF07278.10 Protein of unknown function (DUF1441) 1.1E-06 40-89 / 1-51
PF13411.5 MerR HTH family regulatory protein 3.1E-06 41-85 / 1-48
PF17443.1 Uncharacterized protein pXO2-72 5.4E-06 37-64 / 5-32
PF08876.10 Domain of unknown function (DUF1836) 2.9E-05 40-85 / 10-63
PF04936.11 Protein of unknown function (DUF658) 0.002 39-67 / 87-116
PF00376.22 MerR family regulatory protein 8.9E-05 42-66 / 1-26
PF16701.4 Adenylate cyclase regulatory domain 0.00041 39-82 / 57-101
PF10654.8 Protein of unknown function (DUF2481) 0.0006 37-64 / 77-104
PF07141.10 Putative bacteriophage terminase small subunit 0.0007 38-62 / 29-53
PF16509.4 TrfB plasmid transcriptional repressor 0.00086 38-62 / 29-53
PF01381.21 Helix-turn-helix 0.00091 38-63 / 7-32
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.001 38-64 / 53-79
PF07453.12 NUMOD1 domain 0.0013 38-61 / 17-40
PF04552.12 Sigma-54, DNA binding domain 0.0013 37-63 / 45-71
PF08535.9 KorB domain 0.0013 39-62 / 2-25
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0013 39-62 / 12-35
PF00356.20 Bacterial regulatory proteins, lacI family 0.0015 42-64 / 1-23
PF13171.5 Protein of unknown function (DUF4004) 0.002 40-66 / 2-29
PF06322.10 Phage NinH protein 0.002 38-64 / 14-40
PF02954.18 Bacterial regulatory protein, Fis family 0.002 38-62 / 14-38
PF13413.5 Helix-turn-helix domain 0.002 38-64 / 7-33
PF07750.10 GcrA cell cycle regulator 0.0022 37-62 / 15-41
PF08822.10 Protein of unknown function (DUF1804) 0.0026 38-62 / 17-41
PF14493.5 Helix-turn-helix domain 0.0026 38-63 / 10-35
PF13309.5 HTH domain 0.0027 41-62 / 42-63
PF01710.15 Transposase 0.0027 38-63 / 16-41
PF03683.12 Uncharacterised protein family (UPF0175) 0.0028 36-66 / 25-56
PF05344.10 Domain of Unknown Function (DUF746) 0.0028 38-62 / 10-34
PF07037.10 Putative transcription regulator (DUF1323) 0.0035 41-63 / 1-23
PF00292.17 'Paired box' domain 0.0035 38-62 / 31-55
PF12759.6 InsA C-terminal domain 0.0037 39-62 / 20-43
PF08765.10 Mor transcription activator family 0.0041 39-63 / 71-95
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.0044 42-62 / 53-73
PF09607.9 Brinker DNA-binding domain 0.0044 41-62 / 26-47
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0047 40-63 / 23-46
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0054 38-62 / 21-45
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0059 37-64 / 20-47
PF13011.5 leucine-zipper of insertion element IS481 0.0061 38-62 / 22-46
PF02042.14 RWP-RK domain 0.0064 38-63 / 10-35
PF13412.5 Winged helix-turn-helix DNA-binding 0.0069 39-62 / 16-39
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0072 39-63 / 18-42
PF06971.12 Putative DNA-binding protein N-terminus 0.0077 40-61 / 27-48
PF13404.5 AsnC-type helix-turn-helix domain 0.0077 38-62 / 15-39
PF02796.14 Helix-turn-helix domain of resolvase 0.0078 39-62 / 20-43

Annotations of the NCBI proteins of this PHROG


2:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0045892 negative regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0005667 transcription factor complex
GO:0051775 response to redox state
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated
GO:0043565 sequence-specific DNA binding
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0003700 DNA binding transcription factor activity
GO:0000150 recombinase activity
GO:0005524 ATP binding

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