phrog_5311 is made of 24 protein sequences and is annotated as "helicase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
722.71 876 745


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_030915_p1 YP_009274228.1 DNA primase NC_030915 Gordonia phage Orchid Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Orchidvirus; Gordonia virus Orchid.
NC_023706_p102 YP_009013892.1 gp102 NC_023706 Rhodococcus phage ReqiDocB7 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_028668_p100 YP_009188668.1 hypothetical protein NC_028668 Gordonia phage GMA3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gamtrevirus; Gordonia virus GMA3.
NC_029060_p95 YP_009222548.1 DNA primase NC_029060 Gordonia phage GordDuk1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordtnkvirus; unclassified Gordtnkvirus.
NC_028972_p88 YP_009215298.1 DNA primase NC_028972 Gordonia phage Gmala1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordtnkvirus; unclassified Gordtnkvirus.
NC_031109_p1 YP_009290966.1 hypothetical protein NC_031109 Gordonia phage Jumbo Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gorjumvirus; Gordonia virus Jumbo.
NC_029074_p96 YP_009224004.1 DNA primase NC_029074 Gordonia phage GordTnk2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordtnkvirus.
NC_030905_p2 YP_009273393.1 DNA binding protein NC_030905 Gordonia phage Woes Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus.
NC_028865_p104 YP_009204539.1 putative primase NC_028865 Tsukamurella phage TIN2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tinduovirus.
NC_030924_p4 YP_009275071.1 DNA binding protein NC_030924 Gordonia phage Monty Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Montyvirus.
NC_030944_p3 YP_009276714.1 DNA binding domain protein NC_030944 Gordonia phage Demosthenes Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Demosthenesvirus.
NC_031229_p4 YP_009300955.1 hypothetical protein NC_031229 Gordonia phage Hotorobo Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus.
MG099940_p4 AUE22120.1 hypothetical protein MG099940 Gordonia phage BirksAndSocks Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Montyvirus; Gordonia virus Birksandsocks.
NC_028673_p96 YP_009189233.1 putative primase NC_028673 Gordonia phage GMA7 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Getseptimavirus; Gordonia virus GMA7.
MG757155_p4 AVD99513.1 hypothetical protein MG757155 Gordonia phage Boneham Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus; unclassified Woesvirus.
NC_016166_p98 YP_004934799.1 putative primase NC_016166 Gordonia phage GTE7 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Getseptimavirus; Gordonia virus GTE7.
MG757152_p5 AVD99102.1 DNA binding protein MG757152 Gordonia phage Adgers Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Montyvirus; unclassified Montyvirus.
MG099935_p2 ATW61100.1 DNA binding protein MG099935 Gordonia phage Anamika Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus; unclassified Woesvirus.
KU963258_p3 AMS03396.1 DNA-binding domain protein KU963258 Gordonia phage Katyusha Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Demosthenesvirus; Gordonia virus Katyusha.
MG770214_p4 AUV60608.1 DNA binding protein MG770214 Gordonia phage SteveFrench Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Montyvirus; Gordonia virus Stevefrench.
NC_028966_p104 YP_009214870.1 putative primase NC_028966 Tsukamurella phage TIN3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tinduovirus.
MG770211_p4 AUV60301.1 hypothetical protein MG770211 Gordonia phage Flakey Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Montyvirus; Gordonia virus Flakey.
MH025889_p2 AVP43188.1 DNA binding protein MH025889 Gordonia phage Hail2Pitt Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Woesvirus; unclassified Woesvirus.
NC_030914_p3 YP_009274131.1 DNA binding domain protein NC_030914 Gordonia phage Kvothe Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Demosthenesvirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_7062 17 no annotation unknown function 17 0 1000
phrog_7096 17 no annotation unknown function 17 0 1000
phrog_5558 23 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 6 1.38E-25 15.98
phrog_37971 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10371 DNA helicase DNA, RNA and nucleotide metabolism 96.1 0.00012 300-705 / 265-662
phrog_10514 DNA primase DNA, RNA and nucleotide metabolism 99.3 5.2E-16 312-722 / 334-733
phrog_11992 no annotation unknown function 95.8 0.00028 74-153 / 11-76
phrog_14296 DNA primase DNA, RNA and nucleotide metabolism 97.9 1.7E-08 310-631 / 3-307
phrog_18097 DNA primase DNA, RNA and nucleotide metabolism 95.7 0.00039 73-153 / 1-71
phrog_2304 DNA primase DNA, RNA and nucleotide metabolism 94.1 0.0049 94-138 / 28-68
phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 97.5 2.8E-07 310-706 / 65-512
phrog_26824 no annotation unknown function 93.6 0.0081 70-181 / 4-114
phrog_28894 DNA polymerase/primase DNA, RNA and nucleotide metabolism 96.5 3.7E-05 355-709 / 482-827
phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 99.5 1.8E-18 314-720 / 349-769
phrog_360 DNA primase DNA, RNA and nucleotide metabolism 97.0 3.1E-06 76-164 / 8-82
phrog_6444 DNA primase DNA, RNA and nucleotide metabolism 96.2 9.6E-05 68-228 / 11-166

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00493.22 MCM2/3/5 family 4.3E-11 329-614 / 51-319
PF13337.5 Putative ATP-dependent Lon protease 8.7E-09 573-613 / 391-432
PF01807.19 CHC2 zinc finger 4.4E-08 91-178 / 6-84
PF13654.5 AAA domain 1.8E-06 339-610 / 272-516
PF12774.6 Hydrolytic ATP binding site of dynein motor region D1 2E-05 333-362 / 30-59
PF13148.5 Protein of unknown function (DUF3987) 4.1E-05 549-616 / 283-359
PF12775.6 P-loop containing dynein motor region D3 0.00011 335-360 / 33-58
PF06431.10 Polyomavirus large T antigen C-terminus 0.00015 334-360 / 154-180
PF07726.10 ATPase family associated with various cellular activities (AAA) 0.00018 337-361 / 1-25
PF00519.16 Papillomavirus helicase 0.0002 334-360 / 261-287
PF01078.20 Magnesium chelatase, subunit ChlI 0.00022 335-360 / 22-47
PF00158.25 Sigma-54 interaction domain 0.00024 335-360 / 22-47
PF05272.10 Virulence-associated protein E 0.00042 333-359 / 57-83
PF00308.17 Bacterial dnaA protein 0.00056 335-360 / 33-58
PF14532.5 Sigma-54 interaction domain 0.00076 335-360 / 21-46
PF05496.11 Holliday junction DNA helicase ruvB N-terminus 0.00082 335-360 / 45-70
PF00004.28 ATPase family associated with various cellular activities (AAA) 0.0016 338-360 / 1-23
PF08298.10 PrkA AAA domain 0.0023 335-360 / 85-110
PF13173.5 AAA domain 0.0068 336-358 / 3-25
PF00910.21 RNA helicase 0.0069 338-360 / 1-23

Annotations of the NCBI proteins of this PHROG


7:hypothetical protein 6:DNA binding protein 4:DNA primase 4:primase 2:DNA binding domain protein 1:DNA-binding domain protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K17680 PEO1 : twinkle protein [EC:3.6.4.12] no pathways 56 1

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0009378 four-way junction helicase activity
GO:0006355 regulation of transcription, DNA-templated
GO:0006260 DNA replication
GO:0003723 RNA binding
GO:0004003 ATP-dependent DNA helicase activity
GO:0006281 DNA repair
GO:0008134 transcription factor binding
GO:0005524 ATP binding
GO:0006270 DNA replication initiation
GO:0016887 ATPase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0003724 RNA helicase activity
GO:0003896 DNA primase activity
GO:0008270 zinc ion binding

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