Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
272.7 | 349 | 277 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
KM411960_p32 | AIZ94965.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | KM411960 | Pseudomonas phage phi176 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; Pseudomonas virus Ab09. |
MG030347_p59 | ATW69942.1 | putative ATP-dependent Clp protease | MG030347 | Proteus phage PM135 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Novosibvirus; Proteus virus PM135. |
NC_031062_p31 | YP_009286160.1 | putative ATP-dependent CLP protease | NC_031062 | Erwinia phage vB_EamP_Frozen | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Johnsonvirus. |
NC_029101_p76 | YP_009226172.1 | hypothetical protein | NC_029101 | Pseudomonas phage YH30 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_028885_p54 | YP_009206263.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | NC_028885 | Pseudomonas phage DL64 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_031063_p32 | YP_009286253.1 | ATP dependent protease ATP-binding subunit | NC_031063 | Pseudomonas phage PEV2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus. |
NC_029017_p76 | YP_009219025.1 | hypothetical protein | NC_029017 | Pseudomonas phage KPP21 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Luzseptimavirus. |
NC_019514_p41 | YP_007005777.1 | gp041 | NC_019514 | Erwinia phage vB_EamP-S6 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
NC_024140_p28 | YP_009031805.1 | hypothetical protein | NC_024140 | Pseudomonas phage vB_PaeP_C2-10_Ab09 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus. |
NC_027381_p36 | YP_009152137.1 | hypothetical protein | NC_027381 | Escherichia phage Pollock | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Ithacavirus. |
NC_021772_p39 | YP_008239443.1 | hypothetical protein | NC_021772 | Salmonella phage FSL SP-058 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Ithacavirus. |
NC_013692_p31 | YP_003358428.1 | hypothetical protein | NC_013692 | Pseudomonas phage LIT1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus. |
MF490238_p32 | ASZ72239.1 | hypothetical protein | MF490238 | Pseudomonas phage vB_PaeP_DEV | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_027388_p36 | YP_009152536.1 | hypothetical protein | NC_027388 | Pseudomonas phage YH6 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
JX194238_p31 | AFO70530.1 | hypothetical protein | JX194238 | Pseudomonas phage PA26 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; Pseudomonas virus PA26. |
NC_027345_p32 | YP_009148212.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | NC_027345 | Pseudomonas phage Pa2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_013691_p36 | YP_003358318.1 | hypothetical protein | NC_013691 | Pseudomonas phage LUZ7 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Luzseptimavirus. |
KX098390_p31 | ANJ65260.1 | putative ATP-dependent CLP protease | KX098390 | Erwinia phage vB_EamP_Rexella | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Johnsonvirus; Erwinia virus Frozen. |
MF490236_p32 | ASZ72081.1 | hypothetical protein | MF490236 | Pseudomonas phage vB_PaeP_PYO2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_031104_p33 | YP_009290567.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | NC_031104 | Pseudomonas phage vB_PaeP_MAG4 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
KX171209_p34 | ANT44310.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | KX171209 | Pseudomonas phage vB_Pae575P-3 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
NC_023579_p32 | YP_009007405.1 | ATP-dependent CLP protease | NC_023579 | Erwinia phage Ea9-2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Johnsonvirus. |
NC_026610_p18 | YP_009126575.1 | hypothetical protein | NC_026610 | Vibrio phage VpKK5 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_4781 | 28 | no annotation | unknown function | 13 | 2.55E-54 | 44.72 |
phrog_8112 | 14 | no annotation | unknown function | 13 | 6.36E-62 | 52.32 |
phrog_10440 | 10 | no annotation | unknown function | 2 | 1.40E-11 | 1.98 |
phrog_6596 | 18 | no annotation | unknown function | 2 | 9.53E-11 | 1.14 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_10401 | ATPase | other | 96.4 | 5.6E-05 | 26-178 / 202-329 |
phrog_11143 | no annotation | unknown function | 93.8 | 0.0067 | 31-98 / 49-144 |
phrog_11838 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | 97.0 | 3.4E-06 | 5-103 / 22-113 |
phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 90.3 | 0.056 | 27-49 / 14-36 |
phrog_1297 | ATPase | other | 95.8 | 0.00026 | 28-99 / 26-110 |
phrog_1366 | no annotation | unknown function | 93.4 | 0.01 | 16-126 / 3-142 |
phrog_14685 | no annotation | unknown function | 91.7 | 0.031 | 30-52 / 5-27 |
phrog_15585 | no annotation | unknown function | 94.9 | 0.0017 | 27-152 / 347-468 |
phrog_168 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | 98.4 | 3.6E-10 | 28-101 / 39-111 |
phrog_170 | PhoH-like phosphate starvation-inducible | other | 93.3 | 0.01 | 27-48 / 50-71 |
phrog_1815 | guanylate kinase | other | 95.8 | 0.00029 | 30-103 / 5-53 |
phrog_2071 | ATPase | other | 96.1 | 0.00013 | 30-66 / 6-38 |
phrog_2107 | thymidylate kinase | other | 93.2 | 0.011 | 31-52 / 7-28 |
phrog_21086 | no annotation | unknown function | 93.1 | 0.012 | 26-99 / 236-293 |
phrog_21479 | no annotation | unknown function | 94.5 | 0.003 | 31-64 / 30-61 |
phrog_2376 | ATPase | other | 97.0 | 4E-06 | 10-216 / 58-219 |
phrog_2392 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 93.6 | 0.0082 | 23-60 / 363-402 |
phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | 96.6 | 2E-05 | 24-234 / 104-293 |
phrog_2666 | terminase large subunit | head and packaging | 92.8 | 0.016 | 29-49 / 9-29 |
phrog_29395 | no annotation | unknown function | 96.0 | 0.00015 | 27-99 / 137-218 |
phrog_293 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 94.9 | 0.0016 | 29-52 / 40-63 |
phrog_296 | DNA transposition protein | integration and excision | 96.9 | 6.3E-06 | 30-198 / 94-237 |
phrog_30773 | no annotation | unknown function | 95.5 | 0.00054 | 23-126 / 170-271 |
phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 96.6 | 2E-05 | 2-166 / 7-176 |
phrog_35358 | DNA primase | DNA, RNA and nucleotide metabolism | 94.5 | 0.003 | 25-49 / 470-494 |
phrog_3757 | no annotation | unknown function | 97.9 | 2.3E-08 | 8-211 / 101-272 |
phrog_4339 | no annotation | unknown function | 99.8 | 9.9E-24 | 90-252 / 315-468 |
phrog_4412 | exonuclease V | DNA, RNA and nucleotide metabolism | 92.3 | 0.022 | 28-249 / 365-594 |
phrog_4581 | terminase small subunit | head and packaging | 92.8 | 0.015 | 27-60 / 121-154 |
phrog_4871 | ATP-dependent protease | other | 92.3 | 0.021 | 30-105 / 204-289 |
phrog_505 | polynucleotide kinase | other | 91.7 | 0.031 | 28-67 / 2-40 |
phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 97.1 | 2.2E-06 | 4-100 / 91-186 |
phrog_5846 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | 97.4 | 5.3E-07 | 22-130 / 33-123 |
phrog_6891 | ATPase | other | 95.0 | 0.0015 | 17-100 / 22-125 |
phrog_7485 | no annotation | unknown function | 96.9 | 7.7E-06 | 28-215 / 228-379 |
phrog_761 | thymidylate kinase | other | 94.2 | 0.0046 | 30-52 / 5-27 |
phrog_7998 | no annotation | unknown function | 96.9 | 5.4E-06 | 25-200 / 36-187 |
phrog_8638 | no annotation | unknown function | 95.3 | 0.00092 | 30-134 / 316-417 |
phrog_9172 | no annotation | unknown function | 96.8 | 8.2E-06 | 22-200 / 92-247 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF05496.11 | Holliday junction DNA helicase ruvB N-terminus | 3E-09 | 58-168 / 10-111 |
PF12774.6 | Hydrolytic ATP binding site of dynein motor region D1 | 4.3E-09 | 94-168 / 32-99 |
PF00493.22 | MCM2/3/5 family | 7.9E-09 | 66-120 / 23-83 |
PF12775.6 | P-loop containing dynein motor region D3 | 1E-08 | 69-265 / 12-191 |
PF00308.17 | Bacterial dnaA protein | 2E-08 | 66-118 / 7-57 |
PF01078.20 | Magnesium chelatase, subunit ChlI | 3.5E-08 | 68-119 / 4-47 |
PF05673.12 | Protein of unknown function (DUF815) | 3.8E-08 | 59-118 / 21-78 |
PF01637.17 | ATPase domain predominantly from Archaea | 5.9E-08 | 69-118 / 1-44 |
PF03215.14 | Rad17 cell cycle checkpoint protein | 6.1E-08 | 54-120 / 6-71 |
PF13173.5 | AAA domain | 1.7E-07 | 95-117 / 3-25 |
PF00158.25 | Sigma-54 interaction domain | 2E-07 | 70-119 / 2-47 |
PF05621.10 | Bacterial TniB protein | 2.5E-07 | 67-118 / 14-62 |
PF13191.5 | AAA ATPase domain | 2.9E-07 | 69-118 / 2-48 |
PF06431.10 | Polyomavirus large T antigen C-terminus | 4E-07 | 93-168 / 154-217 |
PF13177.5 | DNA polymerase III, delta subunit | 4.1E-07 | 71-118 / 1-43 |
PF12780.6 | P-loop containing dynein motor region D4 | 5.8E-07 | 93-168 / 30-104 |
PF06068.12 | TIP49 C-terminus | 6.6E-07 | 66-119 / 23-75 |
PF07726.10 | ATPase family associated with various cellular activities (AAA) | 7.1E-07 | 96-121 / 1-26 |
PF10443.8 | RNA12 protein | 1.3E-06 | 72-118 / 1-42 |
PF09820.8 | Predicted AAA-ATPase | 1.4E-06 | 66-118 / 14-55 |
PF14516.5 | AAA-like domain | 1.8E-06 | 67-118 / 10-54 |
PF07693.13 | KAP family P-loop domain | 4.1E-06 | 93-118 / 30-55 |
PF00519.16 | Papillomavirus helicase | 5.3E-06 | 93-119 / 261-287 |
PF07728.13 | AAA domain (dynein-related subfamily) | 5.9E-06 | 97-121 / 2-26 |
PF14532.5 | Sigma-54 interaction domain | 6.1E-06 | 94-119 / 21-46 |
PF05272.10 | Virulence-associated protein E | 8.2E-06 | 93-118 / 58-83 |
PF00004.28 | ATPase family associated with various cellular activities (AAA) | 9.1E-06 | 97-168 / 1-73 |
PF08298.10 | PrkA AAA domain | 1.1E-05 | 65-118 / 56-109 |
PF03969.15 | AFG1-like ATPase | 1.6E-05 | 93-119 / 66-92 |
PF07724.13 | AAA domain (Cdc48 subfamily) | 2.2E-05 | 94-118 / 3-27 |
PF13401.5 | AAA domain | 2.4E-05 | 94-118 / 5-29 |
PF05729.11 | NACHT domain | 2.8E-05 | 96-118 / 2-24 |
PF10923.7 | P-loop Domain of unknown function (DUF2791) | 3.4E-05 | 67-118 / 25-73 |
PF00910.21 | RNA helicase | 4.3E-05 | 97-119 / 1-23 |
PF13654.5 | AAA domain | 5.1E-05 | 68-119 / 3-49 |
PF02283.15 | Cobinamide kinase / cobinamide phosphate guanyltransferase | 6.5E-05 | 97-119 / 1-23 |
PF02572.14 | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | 6.8E-05 | 96-118 / 2-24 |
PF00006.24 | ATP synthase alpha/beta family, nucleotide-binding domain | 7.1E-05 | 94-119 / 14-39 |
PF01695.16 | IstB-like ATP binding protein | 0.00014 | 94-118 / 48-72 |
PF00931.21 | NB-ARC domain | 0.00016 | 72-118 / 1-44 |
PF07931.11 | Chloramphenicol phosphotransferase-like protein | 0.0002 | 95-120 / 2-27 |
PF13337.5 | Putative ATP-dependent Lon protease | 0.00021 | 93-118 / 205-230 |
PF00265.17 | Thymidine kinase | 0.00028 | 95-118 / 2-25 |
PF00625.20 | Guanylate kinase | 0.00028 | 95-119 / 3-27 |
PF13521.5 | AAA domain | 0.00043 | 97-118 / 2-23 |
PF06414.11 | Zeta toxin | 0.00044 | 93-118 / 13-38 |
PF01745.15 | Isopentenyl transferase | 0.00048 | 95-119 / 2-26 |
PF03976.13 | Polyphosphate kinase 2 (PPK2) | 0.0005 | 93-119 / 27-53 |
PF13671.5 | AAA domain | 0.00052 | 97-119 / 2-24 |
PF03266.14 | NTPase | 0.00053 | 96-118 / 1-23 |
PF10649.8 | Protein of unknown function (DUF2478) | 0.00064 | 97-119 / 1-23 |
PF13238.5 | AAA domain | 0.00065 | 97-119 / 1-23 |
PF02702.16 | Osmosensitive K+ channel His kinase sensor domain | 0.00077 | 94-118 / 4-28 |
PF13189.5 | Cytidylate kinase-like family | 0.00079 | 97-119 / 2-24 |
PF05127.13 | Helicase | 0.00098 | 98-118 / 1-21 |
PF01591.17 | 6-phosphofructo-2-kinase | 0.0011 | 94-119 / 9-34 |
PF04851.14 | Type III restriction enzyme, res subunit | 0.0011 | 94-118 / 23-47 |
PF01712.18 | Deoxynucleoside kinase | 0.0011 | 97-119 / 1-23 |
PF08433.9 | Chromatin associated protein KTI12 | 0.0011 | 95-119 / 2-26 |
PF01121.19 | Dephospho-CoA kinase | 0.0011 | 96-119 / 2-25 |
PF08303.10 | tRNA ligase kinase domain | 0.0014 | 97-119 / 2-24 |
PF02224.17 | Cytidylate kinase | 0.0016 | 97-121 / 1-25 |
PF01443.17 | Viral (Superfamily 1) RNA helicase | 0.002 | 97-117 / 1-20 |
PF00485.17 | Phosphoribulokinase / Uridine kinase family | 0.0021 | 97-119 / 2-24 |
PF06048.10 | Domain of unknown function (DUF927) | 0.0024 | 94-120 / 188-214 |
PF02223.16 | Thymidylate kinase | 0.0025 | 99-119 / 1-21 |
PF04665.11 | Poxvirus A32 protein | 0.0026 | 93-118 / 12-37 |
PF01926.22 | 50S ribosome-binding GTPase | 0.003 | 97-117 / 2-22 |
PF04275.13 | Phosphomevalonate kinase | 0.0035 | 99-118 / 1-20 |
PF00406.21 | Adenylate kinase | 0.0036 | 99-119 / 1-21 |
PF09848.8 | Uncharacterized conserved protein (DUF2075) | 0.0041 | 95-118 / 2-25 |
PF10236.8 | Mitochondrial ribosomal death-associated protein 3 | 0.0044 | 93-118 / 23-48 |
PF03668.14 | P-loop ATPase protein family | 0.005 | 95-116 / 2-23 |
PF07475.11 | HPr Serine kinase C-terminal domain | 0.0053 | 94-117 / 14-37 |
PF13207.5 | AAA domain | 0.0055 | 100-119 / 1-20 |
PF05970.13 | PIF1-like helicase | 0.0057 | 94-118 / 22-46 |
PF01583.19 | Adenylylsulphate kinase | 0.0059 | 95-118 / 3-26 |
PF02562.15 | PhoH-like protein | 0.0064 | 94-116 / 19-41 |
PF01057.16 | Parvovirus non-structural protein NS1 | 0.0075 | 94-119 / 118-143 |
PF06309.10 | Torsin | 0.0075 | 68-119 / 25-77 |
PF13245.5 | AAA domain | 0.0077 | 94-118 / 11-35 |
PF13479.5 | AAA domain | 0.0081 | 95-116 / 3-24 |
PF00437.19 | Type II/IV secretion system protein | 0.0083 | 94-119 / 130-155 |
PF05707.11 | Zonular occludens toxin (Zot) | 0.0083 | 96-114 / 2-20 |
PF09439.9 | Signal recognition particle receptor beta subunit | 0.0086 | 95-117 / 4-26 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
K03544 | clpX, CLPX : ATP-dependent Clp protease ATP-binding subunit ClpX | ko04112 Cell cycle - Caulobacter | 98 | 15 |
K13525 | VCP, CDC48 : transitional endoplasmic reticulum ATPase | ko04141 Protein processing in endoplasmic reticulum ko05134 Legionellosis |
56 | 2 |
K13338 | PEX1 : peroxin-1 | ko04146 Peroxisome | 53 | 4 |
K12196 | VPS4 : vacuolar protein-sorting-associated protein 4 | ko04144 Endocytosis | 52 | 1 |
ID | Definition |
---|---|
GO:0004672 | protein kinase activity |
GO:0000155 | phosphorelay sensor kinase activity |
GO:0009058 | biosynthetic process |
GO:0019079 | viral genome replication |
GO:0004797 | thymidine kinase activity |
GO:0005525 | GTP binding |
GO:0004631 | phosphomevalonate kinase activity |
GO:0003723 | RNA binding |
GO:0008152 | metabolic process |
GO:0016301 | kinase activity |
GO:0006281 | DNA repair |
GO:0006109 | regulation of carbohydrate metabolic process |
GO:0004003 | ATP-dependent DNA helicase activity |
GO:0005524 | ATP binding |
GO:0003678 | DNA helicase activity |
GO:0006260 | DNA replication |
GO:0004127 | cytidylate kinase activity |
GO:0016787 | hydrolase activity |
GO:0009378 | four-way junction helicase activity |
GO:0098519 | nucleotide phosphatase activity, acting on free nucleotides |
GO:0003873 | 6-phosphofructo-2-kinase activity |
GO:0006695 | cholesterol biosynthetic process |
GO:0004161 | dimethylallyltranstransferase activity |
GO:0004673 | protein histidine kinase activity |
GO:0000723 | telomere maintenance |
GO:0003972 | RNA ligase (ATP) activity |
GO:0043752 | adenosylcobinamide kinase activity |
GO:0008817 | cob(I)yrinic acid a,c-diamide adenosyltransferase activity |
GO:0006310 | DNA recombination |
GO:0003677 | DNA binding |
GO:0005737 | cytoplasm |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0015937 | coenzyme A biosynthetic process |
GO:0016740 | transferase activity |
GO:0000166 | nucleotide binding |
GO:0006000 | fructose metabolic process |
GO:0006270 | DNA replication initiation |
GO:0004140 | dephospho-CoA kinase activity |
GO:0016887 | ATPase activity |
GO:0009236 | cobalamin biosynthetic process |
GO:0043531 | ADP binding |
GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation |
GO:0000160 | phosphorelay signal transduction system |
GO:0008134 | transcription factor binding |
GO:0006139 | nucleobase-containing compound metabolic process |
GO:0003724 | RNA helicase activity |
GO:0016020 | membrane |
GO:0051188 | cofactor biosynthetic process |