phrog_5830 is made of 22 protein sequences and is annotated as "integrase"
Functional category: integration and excision


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
328.91 419 333


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_023007_p94 YP_008873336.1 hypothetical protein NC_023007 Bacillus phage vB_BanS-Tsamsa Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KT070867_p76 AKQ08391.1 DNA breaking-rejoining enzyme KT070867 Bacillus phage PBC2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p148111 no NCBI prot ID no annotation VI_05341 Bacilli_gi_544846155_64881_105938 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_029073_p146 YP_009223853.1 integrase-like protein NC_029073 Geobacillus virus E3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p28008 no NCBI prot ID no annotation VI_00883 Bacilli_gi_485455515 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
NC_028749_p157 YP_009194207.1 putative integrase NC_028749 Brevibacillus phage Sundance Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_001884_p88 NP_046640.1 hypothetical protein NC_001884 Bacillus virus SPbeta Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus.
KY030782_p97 APD21240.1 hypothetical protein KY030782 Bacillus phage phi3T Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; unclassified Spbetavirus.
p345380 no NCBI prot ID no annotation VI_00475 Bacilli_gi_397738363 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p39484 no NCBI prot ID no annotation VI_01268 Clostridia_gi_548093166 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p227245 no NCBI prot ID no annotation VI_04874 Bacilli_gi_420233404 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p223705 no NCBI prot ID no annotation VI_04797 Bacilli_gi_418954000 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_029119_p11 YP_009226687.1 hypothetical protein NC_029119 Staphylococcus phage SPbeta-like Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p372547 no NCBI prot ID no annotation VI_05268 Bacilli_gi_501061853 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
p286159 no NCBI prot ID no annotation VI_04789 Bacilli_gi_510813841 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p230772 no NCBI prot ID no annotation VI_04644 Bacilli_gi_418281068 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p296489 no NCBI prot ID no annotation VI_05035 Bacilli_gi_481024309 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p393401 no NCBI prot ID no annotation VI_04870 Bacilli_gi_420219606 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
p296160 no NCBI prot ID no annotation VI_05045 Bacilli_gi_481024830 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p71929 no NCBI prot ID no annotation VI_05747 Clostridia_gi_153883184 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage c-st.
NC_007581_p30 YP_398460.1 conserved hypothetical phage-related protein NC_007581 Clostridium phage c-st Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p338370 no NCBI prot ID no annotation VI_05037 Bacilli_gi_481024565 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_5732 22 no annotation unknown function 19 1.55E-88 78.93
phrog_9925 11 no annotation unknown function 10 1.53E-49 39.94
phrog_30149 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10004 no annotation unknown function 99.4 2.4E-17 109-302 / 108-291
phrog_1 integrase integration and excision 97.0 3.8E-06 43-276 / 87-283
phrog_216 integrase integration and excision 94.8 0.0019 110-303 / 6-158

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00589.21 Phage integrase family 3.3E-17 126-312 / 2-167
PF16795.4 Archaeal phage integrase 5.4E-15 126-314 / 3-156
PF11917.7 Protein of unknown function (DUF3435) 3.4E-12 228-315 / 154-242
PF12835.6 Integrase 6.8E-12 122-278 / 9-149
PF16787.4 Centromere DNA-binding protein complex CBF3 subunit, domain 2 2.9E-11 245-314 / 146-220
PF13102.5 Phage integrase SAM-like domain 5.8E-05 14-101 / 2-96
PF13495.5 Phage integrase, N-terminal SAM-like domain 0.00016 33-98 / 16-83
PF12834.6 Phage integrase, N-terminal 0.0003 33-97 / 19-88
PF02899.16 Phage integrase, N-terminal SAM-like domain 0.0018 33-96 / 16-82

Annotations of the NCBI proteins of this PHROG


4:hypothetical protein 1:integrase-like protein 1:integrase 1:DNA breaking-rejoining enzyme 1:protein of an unannotated phage

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0015074 DNA integration

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