phrog_6417 is made of 19 protein sequences and is annotated as "translational regulator"
Functional category: other


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
66.89 117 67


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p208507 no NCBI prot ID no annotation VI_07431 Gammaproteobacteria_gi_485462091_3053160_3089135 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p176764 no NCBI prot ID no annotation VI_01322 Deltaproteobacteria_gi_218885109_862545_900907 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_006548_p48 YP_164084.1 Com translational regulator NC_006548 Pseudomonas phage B3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Beetrevirus; Pseudomonas virus B3.
p208613 no NCBI prot ID no annotation VI_07428 Gammaproteobacteria_gi_485462089_4793324_4829299 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p208560 no NCBI prot ID no annotation VI_07424 Gammaproteobacteria_gi_485462086_4851972_4887947 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p5982 no NCBI prot ID no annotation VI_02542 Gammaproteobacteria_gi_444434353 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p154620 no NCBI prot ID no annotation VI_08600 Gammaproteobacteria_gi_398849380_94_40488 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p199503 no NCBI prot ID no annotation VI_11453 Gammaproteobacteria_gi_546172769_56427_93111 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p218587 no NCBI prot ID no annotation VI_02619 Gammaproteobacteria_gi_254489993_8770_43747 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p211471 no NCBI prot ID no annotation VI_05544 Betaproteobacteria_gi_224824873_246380_282062 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_015265_p22 YP_004306388.1 gp21 NC_015265 Burkholderia phage KS5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Kisquinquevirus; Burkholderia virus KS5.
KP966108_p28 AKA61149.1 hypothetical protein KP966108 Burkholderia phage vB_BceM_AP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Kisquinquevirus; Burkholderia virus AP3.
p394517 no NCBI prot ID no annotation VI_06227 Deltaproteobacteria_gi_347731334_0_14771 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p311251 no NCBI prot ID no annotation VI_04027 Negativicutes_gi_485070723 Viruses.
p108935 no NCBI prot ID no annotation VI_01216 Clostridia_gi_546486246 Viruses.
p257232 no NCBI prot ID no annotation VI_09508 Gammaproteobacteria_gi_430376811_834383_865618 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p292163 no NCBI prot ID no annotation VI_06950 Gammaproteobacteria_gi_416222931 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p257777 no NCBI prot ID no annotation VI_09266 Gammaproteobacteria_gi_452739078_807_31977 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p189618 no NCBI prot ID no annotation VI_04044 unknown_gi_546714669 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_56 1275 DNA methyltransferase other 8 3.51E-18 8.58
phrog_188 565 tail fiber assembly protein tail 4 4.73E-11 1.45

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_13172 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.04 27-37 / 1-11
phrog_13819 gpCom control of modification DNA, RNA and nucleotide metabolism 98.1 2.6E-09 4-39 / 1-36
phrog_17723 no annotation unknown function 91.7 0.03 25-37 / 3-15
phrog_23706 no annotation unknown function 90.1 0.062 24-35 / 3-14
phrog_36973 no annotation unknown function 93.2 0.011 23-36 / 2-15

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF09723.9 Zinc ribbon domain 1.5E-09 21-56 / 1-35
PF10122.8 Mu-like prophage protein Com 5.1E-09 22-59 / 1-37
PF06676.10 Protein of unknown function (DUF1178) 3.1E-08 21-54 / 1-41
PF09538.9 Protein of unknown function (FYDLN_acid) 4.1E-08 19-60 / 3-41
PF14205.5 Cysteine-rich KTR 1.8E-07 24-61 / 2-43
PF08274.11 PhnA Zinc-Ribbon 3.2E-07 25-55 / 2-29
PF03604.12 DNA directed RNA polymerase, 7 kDa subunit 6.9E-07 26-57 / 1-29
PF08792.9 A2L zinc ribbon domain 1.1E-06 25-56 / 3-32
PF08271.11 TFIIB zinc-binding 1.2E-06 26-59 / 1-33
PF03966.15 Trm112p-like protein 1.8E-06 22-57 / 4-37
PF07295.10 Zinc-ribbon containing domain 6.3E-06 19-55 / 108-142
PF02150.15 RNA polymerases M/15 Kd subunit 8E-06 26-57 / 2-29
PF08772.10 Nin one binding (NOB1) Zn-ribbon like 9.6E-06 21-57 / 4-35
PF14803.5 Nudix N-terminal 1.1E-05 27-55 / 2-32
PF07754.10 Domain of unknown function (DUF1610) 1.8E-05 28-53 / 1-24
PF09845.8 Zn-ribbon containing protein 2.8E-05 26-59 / 2-33
PF14446.5 Prokaryotic RING finger family 1 2.8E-05 24-59 / 3-34
PF13453.5 Transcription factor zinc-finger 2.9E-05 27-57 / 1-31
PF09297.10 NADH pyrophosphatase zinc ribbon domain 3.5E-05 25-55 / 3-31
PF13397.5 RNA polymerase-binding protein 4.3E-05 19-57 / 22-62
PF11023.7 Zinc-ribbon containing domain 4.5E-05 24-59 / 66-97
PF06044.11 Dam-replacing family 5.5E-05 16-59 / 22-67
PF01155.18 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 6E-05 22-56 / 67-97
PF11781.7 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 8.4E-05 25-54 / 4-30
PF05129.12 Transcription elongation factor Elf1 like 9.9E-05 22-58 / 18-58
PF13240.5 zinc-ribbon domain 0.00014 27-55 / 1-24
PF05191.13 Adenylate kinase, active site lid 0.00018 26-56 / 2-32
PF13248.5 zinc-ribbon domain 0.00025 26-54 / 3-25
PF14255.5 Cysteine-rich CPXCG 0.00041 26-59 / 1-38
PF09862.8 Protein of unknown function (DUF2089) 0.00055 28-56 / 1-23
PF13719.5 zinc-ribbon domain 0.00062 25-55 / 2-35
PF16919.4 Protein kinase G rubredoxin domain 0.00063 22-57 / 82-119
PF09855.8 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 0.00081 45-55 / 35-45
PF06827.13 Zinc finger found in FPG and IleRS 0.001 27-52 / 3-28
PF01780.18 Ribosomal L37ae protein family 0.0011 23-58 / 31-64
PF03811.12 InsA N-terminal domain 0.0012 21-52 / 1-35
PF01667.16 Ribosomal protein S27 0.0014 23-59 / 5-40
PF10005.8 zinc-ribbon domain 0.0014 25-59 / 1-29
PF01096.17 Transcription factor S-II (TFIIS) 0.0017 26-55 / 1-36
PF17032.4 zinc-ribbon family 0.0026 24-52 / 81-103
PF09788.8 Transmembrane protein 55A 0.0022 22-58 / 171-207
PF10058.8 Predicted integral membrane zinc-ribbon metal-binding protein 0.0033 22-53 / 16-49
PF14369.5 zinc-ribbon 0.0036 25-56 / 2-35
PF05265.12 Protein of unknown function (DUF723) 0.0037 22-52 / 31-63
PF13717.5 zinc-ribbon domain 0.004 25-55 / 2-36
PF09151.9 Domain of unknown function (DUF1936) 0.0066 27-54 / 1-33
PF07503.11 HypF finger 0.0076 28-56 / 2-32
PF02591.14 C4-type zinc ribbon domain 0.0078 28-54 / 2-34
PF05280.10 Flagellar transcriptional activator (FlhC) 0.008 23-54 / 132-163
PF07282.10 Putative transposase DNA-binding domain 0.0079 24-58 / 28-61
PF15616.5 TerY-C metal binding domain 0.0083 25-58 / 75-116

Annotations of the NCBI proteins of this PHROG


2:Com translational regulator 1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0046856 phosphatidylinositol dephosphorylation
GO:0046872 metal ion binding
GO:0003676 nucleic acid binding
GO:0003735 structural constituent of ribosome
GO:0006412 translation
GO:0005887 integral component of plasma membrane
GO:1902208 regulation of bacterial-type flagellum assembly
GO:0005840 ribosome
GO:0006313 transposition, DNA-mediated
GO:0008270 zinc ion binding
GO:0001000 bacterial-type RNA polymerase core enzyme binding
GO:0003677 DNA binding
GO:0005622 intracellular
GO:0045893 positive regulation of transcription, DNA-templated
GO:0016151 nickel cation binding
GO:0006351 transcription, DNA-templated
GO:0016787 hydrolase activity
GO:0034597 phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity
GO:0051604 protein maturation
GO:0004017 adenylate kinase activity
GO:0003899 DNA-directed 5'-3' RNA polymerase activity

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