Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
78.67 | 155 | 72 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p133355 | no NCBI prot ID | no annotation | VI_00839 | Bacilli_gi_386045634_2359202_2401508 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p135078 | no NCBI prot ID | no annotation | VI_04378 | Bacilli_gi_197326955_40906_83132 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_024384_p56 | YP_009044702.1 | zinc-ribbon domain-containing protein | NC_024384 | Listeria phage LP-030-3 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p191969 | no NCBI prot ID | no annotation | VI_00857 | Bacilli_gi_525929673_2120850_2157912 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006. |
p154416 | no NCBI prot ID | no annotation | VI_00852 | Bacilli_gi_525916939_1072721_1113121 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_003216_p34 | NP_463495.1 | gp34 | NC_003216 | Listeria phage A118 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p191838 | no NCBI prot ID | no annotation | VI_00855 | Bacilli_gi_525934212_2389375_2426437 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006. |
p347509 | no NCBI prot ID | no annotation | VI_00854 | Bacilli_gi_525924641_0_20184 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p192158 | no NCBI prot ID | no annotation | VI_00856 | Bacilli_gi_525896797_788234_825281 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Listeria phage A006. |
p153031 | no NCBI prot ID | no annotation | VI_04361 | Bacilli_gi_47092373_35639_76172 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_028929_p33 | YP_009210481.1 | zinc-ribbon domain-containing protein | NC_028929 | Listeria phage vB_LmoS_293 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p167802 | no NCBI prot ID | no annotation | VI_00867 | Bacilli_gi_16799079_2406683_2445916 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p131035 | no NCBI prot ID | no annotation | VI_04391 | Bacilli_gi_197920146 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p169179 | no NCBI prot ID | no annotation | VI_00744 | Bacilli_gi_19745201_578068_617146 | Viruses; unclassified bacterial viruses. |
p351703 | no NCBI prot ID | no annotation | VI_05354 | Bacilli_gi_544931155 | Viruses. |
p202305 | no NCBI prot ID | no annotation | VI_11411 | Gammaproteobacteria_gi_544880174 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p365039 | no NCBI prot ID | no annotation | VI_07360 | Gammaproteobacteria_gi_417845746 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
p410031 | no NCBI prot ID | no annotation | VI_12072 | Gammaproteobacteria_gi_429094643 | Viruses. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_87 | 993 | metallo-protease | other | 11 | 1.06E-27 | 18.1 |
phrog_9828 | 11 | no annotation | unknown function | 8 | 1.99E-39 | 29.82 |
phrog_23467 | 3 | no annotation | unknown function | 2 | 4.49E-14 | 4.47 |
phrog_16859 | 5 | no annotation | unknown function | 2 | 4.49E-13 | 3.47 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_10292 | no annotation | unknown function | 97.2 | 1.1E-06 | 1-56 / 4-67 |
phrog_10675 | no annotation | unknown function | 93.8 | 0.0069 | 1-27 / 1-39 |
phrog_10714 | no annotation | unknown function | 95.2 | 0.001 | 2-26 / 61-86 |
phrog_1076 | FmdB-like transcriptional regulator | transcription regulation | 92.5 | 0.019 | 2-23 / 7-36 |
phrog_12167 | no annotation | unknown function | 92.9 | 0.015 | 2-27 / 140-165 |
phrog_14275 | no annotation | unknown function | 97.2 | 1.4E-06 | 1-27 / 5-31 |
phrog_19315 | no annotation | unknown function | 92.3 | 0.021 | 5-26 / 287-308 |
phrog_22274 | no annotation | unknown function | 93.3 | 0.01 | 2-27 / 13-39 |
phrog_22898 | no annotation | unknown function | 95.9 | 0.00021 | 2-27 / 3-28 |
phrog_2546 | no annotation | unknown function | 96.5 | 3.5E-05 | 1-27 / 1-27 |
phrog_27136 | no annotation | unknown function | 91.5 | 0.034 | 2-27 / 3-27 |
phrog_2945 | no annotation | unknown function | 91.2 | 0.04 | 1-26 / 1-35 |
phrog_32168 | no annotation | unknown function | 91.8 | 0.029 | 2-27 / 4-29 |
phrog_38187 | no annotation | unknown function | 95.9 | 0.00025 | 2-27 / 5-30 |
phrog_4173 | no annotation | unknown function | 93.9 | 0.0062 | 2-27 / 16-62 |
phrog_4852 | no annotation | unknown function | 96.6 | 2.5E-05 | 2-32 / 15-50 |
phrog_4875 | no annotation | unknown function | 91.9 | 0.027 | 1-27 / 13-43 |
phrog_506 | transposase | integration and excision | 90.2 | 0.06 | 2-27 / 316-345 |
phrog_8436 | no annotation | unknown function | 90.6 | 0.05 | 2-43 / 65-103 |
phrog_9188 | no annotation | unknown function | 95.7 | 0.00041 | 1-25 / 35-61 |
phrog_9414 | no annotation | unknown function | 91.1 | 0.042 | 1-27 / 5-41 |
phrog_9700 | no annotation | unknown function | 96.0 | 0.00017 | 1-28 / 6-36 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF09889.8 | Uncharacterized protein containing a Zn-ribbon (DUF2116) | 5.3E-12 | 8-36 / 2-31 |
PF10571.8 | Uncharacterised protein family UPF0547 | 1.1E-11 | 10-34 / 1-24 |
PF13240.5 | zinc-ribbon domain | 2.4E-11 | 11-33 / 1-24 |
PF14446.5 | Prokaryotic RING finger family 1 | 1.5E-10 | 8-36 / 3-33 |
PF16919.4 | Protein kinase G rubredoxin domain | 2.9E-10 | 6-35 / 82-119 |
PF13248.5 | zinc-ribbon domain | 5.5E-10 | 9-33 / 2-26 |
PF08792.9 | A2L zinc ribbon domain | 7.8E-10 | 8-34 / 2-32 |
PF06044.11 | Dam-replacing family | 1.2E-09 | 7-36 / 29-66 |
PF09538.9 | Protein of unknown function (FYDLN_acid) | 1.3E-09 | 1-36 / 1-39 |
PF11023.7 | Zinc-ribbon containing domain | 3.2E-09 | 8-36 / 66-96 |
PF12773.6 | Double zinc ribbon | 2.6E-08 | 12-34 / 1-23 |
PF02150.15 | RNA polymerases M/15 Kd subunit | 3.7E-08 | 10-34 / 2-28 |
PF07191.11 | zinc-ribbons | 5.2E-08 | 10-34 / 17-40 |
PF08274.11 | PhnA Zinc-Ribbon | 7.3E-08 | 9-33 / 2-29 |
PF17032.4 | zinc-ribbon family | 0.00032 | 22-36 / 35-49 |
PF08772.10 | Nin one binding (NOB1) Zn-ribbon like | 2E-07 | 7-34 / 6-34 |
PF14205.5 | Cysteine-rich KTR | 2.4E-07 | 9-35 / 3-39 |
PF14803.5 | Nudix N-terminal | 5E-07 | 10-33 / 1-32 |
PF09297.10 | NADH pyrophosphatase zinc ribbon domain | 5.7E-07 | 8-32 / 2-30 |
PF10083.8 | Uncharacterized protein conserved in bacteria (DUF2321) | 6.1E-07 | 9-34 / 26-48 |
PF03604.12 | DNA directed RNA polymerase, 7 kDa subunit | 1.2E-06 | 11-34 / 2-28 |
PF08271.11 | TFIIB zinc-binding | 1.3E-06 | 10-36 / 1-32 |
PF03966.15 | Trm112p-like protein | 1.5E-06 | 7-34 / 5-36 |
PF12172.7 | Rubredoxin-like zinc ribbon domain (DUF35_N) | 1.9E-06 | 7-32 / 9-34 |
PF09723.9 | Zinc ribbon domain | 2.4E-06 | 8-34 / 4-35 |
PF01155.18 | Hydrogenase/urease nickel incorporation, metallochaperone, hypA | 3.1E-06 | 6-34 / 67-97 |
PF11781.7 | Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 | 3.7E-06 | 8-32 / 3-30 |
PF07754.10 | Domain of unknown function (DUF1610) | 3.7E-06 | 12-31 / 1-24 |
PF09845.8 | Zn-ribbon containing protein | 5.1E-06 | 10-35 / 2-31 |
PF10005.8 | zinc-ribbon domain | 6E-06 | 10-35 / 2-27 |
PF09862.8 | Protein of unknown function (DUF2089) | 6.8E-06 | 12-34 / 1-23 |
PF14149.5 | YhfH-like protein | 6.6E-06 | 3-22 / 7-26 |
PF09788.8 | Transmembrane protein 55A | 9.3E-06 | 7-34 / 172-205 |
PF10122.8 | Mu-like prophage protein Com | 1.9E-05 | 8-34 / 3-34 |
PF13453.5 | Transcription factor zinc-finger | 2.1E-05 | 11-34 / 1-30 |
PF14952.5 | Putative treble-clef, zinc-finger, Zn-binding | 4.4E-05 | 7-34 / 8-37 |
PF05191.13 | Adenylate kinase, active site lid | 6.3E-05 | 10-34 / 2-32 |
PF06827.13 | Zinc finger found in FPG and IleRS | 9.3E-05 | 10-30 / 2-28 |
PF06677.11 | Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) | 0.00014 | 8-29 / 14-38 |
PF07295.10 | Zinc-ribbon containing domain | 0.00015 | 7-33 / 112-142 |
PF06221.12 | Putative zinc finger motif, C2HC5-type | 0.00016 | 9-36 / 17-46 |
PF15616.5 | TerY-C metal binding domain | 0.00017 | 9-34 / 75-114 |
PF12647.6 | RNHCP domain | 0.00018 | 8-36 / 2-34 |
PF00641.17 | Zn-finger in Ran binding protein and others | 0.00024 | 8-33 / 3-28 |
PF05154.15 | TM2 domain | 0.00024 | 77-125 / 11-53 |
PF10013.8 | Uncharacterized protein conserved in bacteria (DUF2256) | 0.0005 | 6-20 / 4-18 |
PF07503.11 | HypF finger | 0.00065 | 12-33 / 2-31 |
PF07282.10 | Putative transposase DNA-binding domain | 0.00076 | 8-35 / 28-60 |
PF04216.11 | Protein involved in formate dehydrogenase formation | 0.00074 | 10-30 / 196-216 |
PF06906.10 | Protein of unknown function (DUF1272) | 0.00088 | 24-34 / 43-53 |
PF10146.8 | Zinc finger-containing protein | 0.0012 | 5-34 / 210-239 |
PF14255.5 | Cysteine-rich CPXCG | 0.0013 | 11-35 / 2-36 |
PF00301.19 | Rubredoxin | 0.0014 | 10-20 / 2-12 |
PF03854.13 | P-11 zinc finger | 0.0013 | 8-35 / 20-47 |
PF06556.10 | IAP-like protein p27 C-terminus | 0.0015 | 7-32 / 91-117 |
PF09567.9 | MamI restriction endonuclease | 0.0021 | 7-34 / 53-80 |
PF12855.6 | Life-span regulatory factor | 0.0022 | 8-20 / 4-16 |
PF01529.19 | DHHC palmitoyltransferase | 0.0025 | 6-35 / 2-31 |
PF06170.11 | Protein of unknown function (DUF983) | 0.0028 | 23-36 / 8-21 |
PF01780.18 | Ribosomal L37ae protein family | 0.0036 | 8-35 / 32-63 |
PF01020.16 | Ribosomal L40e family | 0.0042 | 7-32 / 14-41 |
PF02132.14 | RecR protein | 0.0045 | 7-31 / 14-36 |
PF11290.7 | Protein of unknown function (DUF3090) | 0.0044 | 8-35 / 139-166 |
PF06750.12 | Bacterial Peptidase A24 N-terminal domain | 0.0048 | 10-20 / 50-60 |
PF04475.11 | Protein of unknown function (DUF555) | 0.0056 | 19-35 / 42-58 |
PF11682.7 | Probable zinc-ribbon | 0.007 | 7-35 / 95-122 |
PF17244.1 | Cell division control protein 24, OB domain 3 | 0.0073 | 10-33 / 138-164 |
PF14369.5 | zinc-ribbon | 0.0071 | 10-33 / 3-34 |
PF06869.11 | Protein of unknown function (DUF1258) | 0.0073 | 7-34 / 14-39 |
PF05810.11 | NinF protein | 0.0075 | 10-34 / 18-43 |
PF09526.9 | Probable metal-binding protein (DUF2387) | 0.0078 | 6-35 / 5-43 |
PF06676.10 | Protein of unknown function (DUF1178) | 0.0091 | 8-32 / 4-41 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0003723 | RNA binding |
GO:0046872 | metal ion binding |
GO:0003735 | structural constituent of ribosome |
GO:0005737 | cytoplasm |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0006412 | translation |
GO:0005887 | integral component of plasma membrane |
GO:0009036 | Type II site-specific deoxyribonuclease activity |
GO:0005634 | nucleus |
GO:0005506 | iron ion binding |
GO:0046856 | phosphatidylinositol dephosphorylation |
GO:0005622 | intracellular |
GO:0009307 | DNA restriction-modification system |
GO:0016151 | nickel cation binding |
GO:0006351 | transcription, DNA-templated |
GO:0016787 | hydrolase activity |
GO:0034597 | phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity |
GO:0051604 | protein maturation |
GO:0004017 | adenylate kinase activity |
GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
GO:0005840 | ribosome |
GO:0008270 | zinc ion binding |
GO:0003677 | DNA binding |