phrog_6615 is made of 18 protein sequences and is annotated as "DNA polymerase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
204.78 278 212


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p201621 no NCBI prot ID no annotation VI_04527 Bacilli_gi_336232957 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p285549 no NCBI prot ID no annotation VI_04526 Bacilli_gi_336232955 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_029058_p123 YP_009222361.1 DNA polymerase III beta chain NC_029058 Lactobacillus phage LfeInf Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; unclassified Herelleviridae.
p181927 no NCBI prot ID no annotation VI_00599 Bacilli_gi_502322615_33902_71931 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiFL4A.
p275895 no NCBI prot ID no annotation VI_00516 Bacilli_gi_501007686_0_29277 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p152542 no NCBI prot ID no annotation VI_00610 Bacilli_gi_502432782_1367392_1407978 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p152716 no NCBI prot ID no annotation VI_00586 Bacilli_gi_502174871_1518129_1558706 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p152489 no NCBI prot ID no annotation VI_00585 Bacilli_gi_502168195_1834634_1875220 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_029073_p175 YP_009223882.1 putative DNA polymerase III beta clamp subunit NC_029073 Geobacillus virus E3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p201895 no NCBI prot ID no annotation VI_00597 Bacilli_gi_502303887_108605_145100 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p37809 no NCBI prot ID no annotation VI_04875 Bacilli_gi_420233465 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_029119_p17 YP_009226693.1 DNA polymerase III subunit beta NC_029119 Staphylococcus phage SPbeta-like Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p372541 no NCBI prot ID no annotation VI_05268 Bacilli_gi_501061853 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
NC_027358_p7 YP_009149964.1 DNA polymerase NC_027358 Leuconostoc phage Ln-9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mccleskeyvirinae; Unaquatrovirus.
NC_027987_p4 YP_009168334.1 DNA polymerase NC_027987 Leuconostoc phage 1-A4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mccleskeyvirinae; Unaquatrovirus.
p76715 no NCBI prot ID no annotation VI_04394 Bacilli_gi_126652723_0_48258 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KT001912_p46 AKU43384.1 DNA polymerase III subunit beta KT001912 Bacillus phage Silence Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_006557_p18 YP_164397.1 hypothetical protein NC_006557 Bacillus phage BCJA1c Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_121 756 no annotation unknown function 5 6.57E-13 3.3
phrog_22831 3 no annotation unknown function 2 5.88E-14 4.35
phrog_30692 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_15095 no annotation unknown function 96.8 9.6E-06 5-198 / 11-220
phrog_3007 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 98.0 7.1E-09 6-97 / 6-133
phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 99.0 1.6E-13 12-207 / 141-361

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF02768.14 DNA polymerase III beta subunit, C-terminal domain 6.6E-13 94-225 / 3-119
PF02747.14 Proliferating cell nuclear antigen, C-terminal domain 3.3E-07 101-224 / 9-123
PF04139.12 Rad9 1.9E-05 83-224 / 107-244
PF02767.15 DNA polymerase III beta subunit, central domain 0.0024 105-212 / 2-103
PF00712.18 DNA polymerase III beta subunit, N-terminal domain 0.0053 103-211 / 3-101
PF02144.15 Repair protein Rad1/Rec1/Rad17 0.0029 99-211 / 133-233

Annotations of the NCBI proteins of this PHROG


2:DNA polymerase 2:DNA polymerase III subunit beta 1:DNA polymerase III beta clamp subunit 1:DNA polymerase III beta chain 1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K02338 DPO3B, dnaN : DNA polymerase III subunit beta [EC:2.7.7.7] ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko03430 Mismatch repair
ko03440 Homologous recombination
60 2

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0000077 DNA damage checkpoint
GO:0003887 DNA-directed DNA polymerase activity
GO:0009360 DNA polymerase III complex
GO:0006260 DNA replication
GO:0003677 DNA binding
GO:0006275 regulation of DNA replication
GO:0005634 nucleus
GO:0008408 3'-5' exonuclease activity
GO:0030896 checkpoint clamp complex

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