phrog_6620 is made of 18 protein sequences and is annotated as "transposase"
Functional category: integration and excision


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
192.56 229 203


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p336225 no NCBI prot ID no annotation VI_06314 Epsilonproteobacteria_gi_544749112 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_029316_p38 YP_009230291.1 transposase NC_029316 Acidianus tailed spindle virus Viruses; Bicaudaviridae; unclassified Bicaudaviridae.
NC_007581_p133 YP_398563.1 putative IS transposase (OrfA) NC_007581 Clostridium phage c-st Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p68607 no NCBI prot ID no annotation VI_05782 Clostridia_gi_485045024 Viruses.
p408105 no NCBI prot ID no annotation VI_06302 Epsilonproteobacteria_gi_420522047_281975_295145 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_007581_p147 YP_398577.1 putative IS transposase (OrfA) NC_007581 Clostridium phage c-st Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p22506 no NCBI prot ID no annotation VI_12484 unknown_gi_253682895 Viruses; unclassified bacterial viruses; Clostridium phage D-1873.
NC_007581_p176 YP_398606.1 putative IS transposase (OrfA) NC_007581 Clostridium phage c-st Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KX119202_p18 ANT43120.1 mobile element protein KX119202 Helicobacter phage Pt1293U Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Schmidvirus; unclassified Schmidvirus.
KX119193_p3 ANT42793.1 TnpA KX119193 Helicobacter phage FrB58M Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Schmidvirus; unclassified Schmidvirus.
NC_019507_p63 YP_007005133.1 putative transposase, IS607 family NC_019507 Campylobacter virus CP21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Firehammervirus.
p71905 no NCBI prot ID no annotation VI_05747 Clostridia_gi_153883184 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage c-st.
NC_008562_p136 YP_851150.1 putative site-specific integrase-resolvase NC_008562 Microcystis aeruginosa phage Ma-LMM01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p204960 no NCBI prot ID no annotation VI_00022 Actinobacteria_gi_223955933_488_36693 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_015937_p132 YP_004782339.1 resolvase-like protein NC_015937 Thermus phage TMA Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_010537_p62 YP_001798580.1 hypothetical protein NC_010537 Acidianus filamentous virus 9 Viruses; Ligamenvirales; Lipothrixviridae; Betalipothrixvirus.
EU545650_p62 ACB37296.1 hypothetical protein EU545650 Acidianus filamentous virus 9 Viruses; Ligamenvirales; Lipothrixviridae; Betalipothrixvirus.
p242723 no NCBI prot ID no annotation VI_05776 Clostridia_gi_416348575 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage c-st.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_506 269 transposase integration and excision 12 2.32E-38 28.76
phrog_6678 18 no annotation unknown function 2 3.02E-11 1.64

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10045 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.2 0.00099 2-40 / 19-57
phrog_11671 no annotation unknown function 98.0 1.1E-08 1-53 / 5-57
phrog_12527 excisionase integration and excision 92.7 0.017 1-79 / 27-111
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 98.9 1.3E-12 60-173 / 2-110
phrog_141 terminase small subunit head and packaging 92.6 0.018 3-135 / 9-122
phrog_151 transposase integration and excision 93.6 0.0083 3-26 / 23-46
phrog_15534 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.1 0.025 3-52 / 39-85
phrog_1668 tail assembly protein tail 91.3 0.037 4-52 / 19-71
phrog_1729 no annotation unknown function 95.7 0.00034 6-30 / 87-111
phrog_1864 no annotation unknown function 93.2 0.011 3-40 / 18-53
phrog_1969 no annotation unknown function 93.7 0.0073 2-49 / 53-98
phrog_19880 transcriptional regulator transcription regulation 95.4 0.00077 4-50 / 73-118
phrog_20793 no annotation unknown function 98.0 5.6E-09 2-52 / 6-56
phrog_2104 no annotation unknown function 90.3 0.057 4-28 / 59-83
phrog_23834 no annotation unknown function 91.8 0.029 6-33 / 18-46
phrog_2474 MerR-like transcriptional regulator transcription regulation 95.5 0.0006 4-52 / 16-64
phrog_2538 terminase small subunit head and packaging 93.0 0.013 4-30 / 20-46
phrog_2655 excisionase integration and excision 94.6 0.0026 1-53 / 5-59
phrog_2790 excisionase and transcriptional regulator integration and excision 92.1 0.024 3-88 / 37-120
phrog_2907 excisionase integration and excision 96.2 8.6E-05 2-42 / 4-45
phrog_32660 no annotation unknown function 91.4 0.035 2-53 / 8-73
phrog_3470 no annotation unknown function 92.2 0.022 3-50 / 6-55
phrog_35 transcriptional repressor transcription regulation 93.1 0.012 5-32 / 15-42
phrog_3 transcriptional repressor transcription regulation 92.8 0.015 3-28 / 16-40
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 93.0 0.013 4-40 / 21-57
phrog_4691 excisionase integration and excision 93.6 0.0081 2-49 / 17-63
phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 92.3 0.021 3-50 / 4-57
phrog_4779 transcriptional regulator transcription regulation 93.5 0.0088 4-33 / 15-44
phrog_575 Cox-like excisionase and repressor integration and excision 96.3 7.4E-05 3-34 / 13-46
phrog_57 terminase small subunit head and packaging 95.5 0.00053 3-50 / 2-49
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 95.7 0.00035 2-53 / 13-61
phrog_629 excisionase integration and excision 93.3 0.011 1-49 / 2-53
phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism 95.9 0.00022 2-51 / 8-56
phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.4 0.02 2-52 / 35-83
phrog_66 excisionase and transcriptional regulator integration and excision 98.0 1E-08 2-53 / 8-58
phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 90.1 0.061 3-38 / 19-62
phrog_7735 excisionase integration and excision 94.7 0.0024 3-54 / 17-67
phrog_7950 transcriptional repressor transcription regulation 92.6 0.018 4-28 / 23-47
phrog_8275 DNA invertase DNA, RNA and nucleotide metabolism 94.0 0.0055 60-114 / 2-49
phrog_8898 no annotation unknown function 92.1 0.024 3-45 / 14-55
phrog_8 transcriptional regulator transcription regulation 91.8 0.029 3-28 / 14-37
phrog_95 integrase integration and excision 99.0 9.3E-14 58-179 / 2-130
phrog_9834 excisionase and transcriptional regulator integration and excision 92.9 0.014 3-33 / 28-59

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00239.20 Resolvase, N terminal domain 3E-15 77-195 / 17-143
PF04708.11 Poxvirus F16 protein 1.2E-10 64-160 / 4-100
PF11112.7 Pyocin activator protein PrtN 4.1E-08 3-56 / 11-69
PF06806.11 Putative excisionase (DUF1233) 3.2E-07 2-55 / 6-68
PF12964.6 Protein of unknown function (DUF3853) 5.7E-07 3-54 / 43-94
PF07618.10 Protein of unknown function (DUF1580) 7.5E-07 5-55 / 2-55
PF10743.8 Regulatory phage protein cox 2.4E-06 3-57 / 9-67
PF09035.9 Excisionase from transposon Tn916 2.7E-06 3-55 / 13-65
PF07825.10 Excisionase-like protein 3.5E-06 5-49 / 2-48
PF17443.1 Uncharacterized protein pXO2-72 5.5E-06 3-30 / 6-33
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 6.3E-06 4-50 / 2-49
PF12728.6 Helix-turn-helix domain 1.9E-05 5-54 / 1-49
PF13591.5 MerR HTH family regulatory protein 2E-05 6-52 / 1-45
PF07471.11 Phage DNA packaging protein Nu1 3E-05 5-57 / 2-57
PF13411.5 MerR HTH family regulatory protein 5.4E-05 6-35 / 1-30
PF07278.10 Protein of unknown function (DUF1441) 5.6E-05 6-57 / 2-51
PF00376.22 MerR family regulatory protein 8.1E-05 7-33 / 1-27
PF04936.11 Protein of unknown function (DUF658) 0.00072 5-34 / 14-43
PF07453.12 NUMOD1 domain 0.0043 4-25 / 18-39
PF08876.10 Domain of unknown function (DUF1836) 0.008 5-34 / 10-49
PF06322.10 Phage NinH protein 0.0084 5-32 / 16-43
PF00356.20 Bacterial regulatory proteins, lacI family 0.0085 7-29 / 1-23

Annotations of the NCBI proteins of this PHROG


3:IS transposase (OrfA) 2:hypothetical protein 1:transposase 1:site-specific integrase-resolvase 1:transposase, IS607 family 1:TnpA 1:resolvase-like protein 1:mobile element protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0006355 regulation of transcription, DNA-templated
GO:0000150 recombinase activity

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