phrog_7170 is made of 16 protein sequences and is annotated as "HTH DNA binding protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
196.88 231 219


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MF472894_p61 ASZ75320.1 helix-turn-helix DNA binding protein MF472894 Mycobacterium phage Majeke Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_023552_p55 YP_009004426.1 HTH DNA binding protein NC_023552 Mycobacterium phage Donovan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
NC_031261_p61 YP_009303819.1 HTH DNA binding domain protein NC_031261 Mycobacterium phage Shipwreck Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_028823_p74 YP_009200701.1 hypothetical protein NC_028823 Mycobacterium phage Bipolar Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
MF133446_p61 ASD53685.1 helix-turn-helix DNA binding domain protein MF133446 Mycobacterium phage Bogie Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_022055_p77 YP_008409034.1 hypothetical protein NC_022055 Mycobacterium phage Bobi Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
MF281061_p60 ASR85012.1 HTH DNA binding protein MF281061 Mycobacterium phage Ksquared Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
JN572061_p57 AVD98095.1 hypothetical protein JN572061 Mycobacterium phage Jebeks Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; Mycobacterium virus Jebeks.
MF373843_p62 ASR84914.1 helix-turn-helix DNA binding domain protein MF373843 Mycobacterium phage StevieRay Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_026605_p58 YP_009126013.1 HTH binding domain protein NC_026605 Mycobacterium phage Malithi Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
NC_028747_p59 YP_009193956.1 HTH DNA binding protein NC_028747 Mycobacterium phage Brusacoram Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
NC_021302_p55 YP_008051280.1 HTH DNA binding protein NC_021302 Mycobacterium phage Fishburne Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
MF140399_p55 ASR86430.1 HTH DNA binding protein MF140399 Mycobacterium phage Bartholomew Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_014901_p76 YP_004123898.1 gp76 NC_014901 Mycobacterium phage Wee Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
NC_025433_p76 YP_009100188.1 gp76 NC_025433 Mycobacterium phage Taj Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
MF919492_p57 ATN87201.1 HTH DNA binding protein MF919492 Mycobacterium phage Arib1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_5921 21 no annotation unknown function 16 7.22E-75 65.26
phrog_2060 73 DNA methyltransferase other 11 7.03E-42 32.27
phrog_17383 5 DNA binding protein DNA, RNA and nucleotide metabolism 5 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1303 DNA binding protein DNA, RNA and nucleotide metabolism 94.0 0.0053 74-153 / 28-128
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 91.9 0.027 73-114 / 52-93
phrog_532 late transcriptional activator transcription regulation 92.4 0.021 78-118 / 84-123
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 94.9 0.0016 73-122 / 50-99
phrog_9586 no annotation unknown function 90.9 0.044 79-117 / 261-299

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07638.10 ECF sigma factor 1.5E-05 75-124 / 133-182
PF05331.10 Protein of unknown function (DUF742) 0.00024 74-119 / 37-81
PF02001.15 Protein of unknown function DUF134 0.00025 71-126 / 27-82
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00029 74-123 / 38-87
PF06530.11 Phage antitermination protein Q 0.00042 77-126 / 65-114
PF04545.15 Sigma-70, region 4 0.00043 75-120 / 4-53
PF07374.10 Protein of unknown function (DUF1492) 0.00044 74-119 / 53-99
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00081 76-123 / 3-51
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.0011 74-126 / 16-68
PF08281.11 Sigma-70, region 4 0.0016 74-118 / 9-53
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0019 75-120 / 6-52
PF16509.4 TrfB plasmid transcriptional repressor 0.0022 75-123 / 15-63
PF09862.8 Protein of unknown function (DUF2089) 0.0023 75-121 / 33-79
PF06467.13 MYM-type Zinc finger with FCS sequence motif 0.0026 2-37 / 2-37
PF12759.6 InsA C-terminal domain 0.0024 76-115 / 6-45
PF02796.14 Helix-turn-helix domain of resolvase 0.0035 76-114 / 6-44
PF05263.10 Protein of unknown function (DUF722) 0.0039 73-120 / 79-133
PF07750.10 GcrA cell cycle regulator 0.0041 76-119 / 3-47
PF13936.5 Helix-turn-helix domain 0.0038 75-114 / 4-43
PF08394.9 Archaeal TRASH domain 0.0043 6-39 / 1-35
PF16264.4 SatD family (SatD) 0.0049 74-123 / 149-203
PF04945.12 YHS domain 0.0063 5-40 / 2-39
PF11427.7 Tc3 transposase 0.0059 76-116 / 5-45
PF04967.11 HTH DNA binding domain 0.0067 92-120 / 24-52

Annotations of the NCBI proteins of this PHROG


6:HTH DNA binding protein 5:hypothetical protein 2:helix-turn-helix DNA binding domain protein 1:HTH DNA binding domain protein 1:helix-turn-helix DNA binding protein 1:HTH binding domain protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0008270 zinc ion binding
GO:0000150 recombinase activity
GO:0003700 DNA binding transcription factor activity
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0016987 sigma factor activity
GO:0006355 regulation of transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation

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