Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
282.56 | 398 | 271 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p50923 | no NCBI prot ID | no annotation | VI_00885 | Bacilli_gi_485455564 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
p43439 | no NCBI prot ID | no annotation | VI_04569 | Bacilli_gi_485455588 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p53019 | no NCBI prot ID | no annotation | VI_05150 | Bacilli_gi_484070739 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p341690 | no NCBI prot ID | no annotation | VI_05047 | Bacilli_gi_407980662 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p43406 | no NCBI prot ID | no annotation | VI_00474 | Bacilli_gi_397738354 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p345926 | no NCBI prot ID | no annotation | VI_04512 | Bacilli_gi_485038625_72012_92454 | Viruses. |
p278323 | no NCBI prot ID | no annotation | VI_05365 | Bacilli_gi_546316379_2287_31151 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p278791 | no NCBI prot ID | no annotation | VI_05275 | Bacilli_gi_487633587_19493_48230 | Viruses. |
p294859 | no NCBI prot ID | no annotation | VI_05057 | Bacilli_gi_483992709_116952_143462 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p213699 | no NCBI prot ID | no annotation | VI_00911 | Bacilli_gi_484080341 | Viruses. |
p151905 | no NCBI prot ID | no annotation | VI_00910 | Bacilli_gi_484080317 | Viruses. |
p56833 | no NCBI prot ID | no annotation | VI_04609 | Bacilli_gi_354585674_8738_62189 | Viruses. |
NC_021784_p42 | YP_008240346.1 | XkdB protein | NC_021784 | Thermus phage phi OH2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
p184921 | no NCBI prot ID | no annotation | VI_05451 | Bacilli_gi_519663067_11023_48772 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Thermus phage phi OH2. |
p60216 | no NCBI prot ID | no annotation | VI_05811 | Clostridia_gi_484165891 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p384568 | no NCBI prot ID | no annotation | VI_05826 | Clostridia_gi_499152505 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_50 | 1303 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 8 | 7.40E-19 | 9.25 |
phrog_2289 | 66 | helicase loader | DNA, RNA and nucleotide metabolism | 8 | 9.71E-31 | 21.13 |
phrog_13255 | 7 | no annotation | unknown function | 5 | 8.59E-27 | 17.19 |
phrog_12451 | 8 | no annotation | unknown function | 4 | 2.29E-21 | 11.76 |
phrog_28162 | 2 | no annotation | unknown function | 2 | 0 | 1000 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1032 | replication initiation protein | DNA, RNA and nucleotide metabolism | 91.5 | 0.034 | 26-94 / 18-75 |
phrog_10724 | no annotation | unknown function | 92.8 | 0.016 | 50-100 / 25-74 |
phrog_1098 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 90.2 | 0.061 | 24-267 / 15-257 |
phrog_13105 | no annotation | unknown function | 91.1 | 0.04 | 54-111 / 17-93 |
phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 93.1 | 0.012 | 57-107 / 13-63 |
phrog_151 | transposase | integration and excision | 92.5 | 0.019 | 58-85 / 25-52 |
phrog_1558 | no annotation | unknown function | 91.9 | 0.026 | 32-82 / 97-143 |
phrog_16826 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 99.2 | 4.8E-15 | 152-245 / 216-309 |
phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 98.7 | 9.4E-12 | 3-235 / 3-220 |
phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 99.3 | 9.6E-16 | 4-143 / 1-150 |
phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 96.1 | 0.00013 | 58-200 / 40-193 |
phrog_27581 | no annotation | unknown function | 97.8 | 4.4E-08 | 2-110 / 23-140 |
phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 91.5 | 0.034 | 6-103 / 27-120 |
phrog_3470 | no annotation | unknown function | 90.4 | 0.055 | 58-86 / 8-36 |
phrog_3502 | no annotation | unknown function | 93.4 | 0.0096 | 54-89 / 23-59 |
phrog_35955 | no annotation | unknown function | 90.5 | 0.054 | 33-141 / 5-111 |
phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 96.9 | 7.4E-06 | 55-208 / 47-214 |
phrog_4617 | replication initiation protein | DNA, RNA and nucleotide metabolism | 93.4 | 0.0094 | 29-92 / 20-74 |
phrog_66 | excisionase and transcriptional regulator | integration and excision | 92.0 | 0.026 | 56-79 / 9-32 |
phrog_678 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 93.3 | 0.011 | 55-95 / 46-86 |
phrog_7676 | no annotation | unknown function | 90.2 | 0.059 | 58-85 / 18-45 |
phrog_8102 | replication initiation protein | DNA, RNA and nucleotide metabolism | 95.4 | 0.00064 | 58-93 / 49-84 |
phrog_9285 | no annotation | unknown function | 94.8 | 0.0019 | 47-87 / 25-65 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF09681.9 | N-terminal phage replisome organiser (Phage_rep_org_N) | 1.1E-05 | 10-109 / 1-100 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 1.8E-05 | 10-83 / 2-75 |
PF04492.12 | Bacteriophage replication protein O | 5E-05 | 3-93 / 2-83 |
PF07261.10 | Replication initiation and membrane attachment | 0.0003 | 178-243 / 10-65 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 0.0012 | 59-93 / 23-57 |
PF01726.15 | LexA DNA binding domain | 0.0036 | 60-93 / 26-60 |
PF16221.4 | winged helix-turn-helix | 0.0036 | 60-91 / 47-78 |
PF08222.10 | CodY helix-turn-helix domain | 0.004 | 60-93 / 5-38 |
PF09012.9 | FeoC like transcriptional regulator | 0.005 | 60-94 / 15-49 |
PF10771.8 | Winged helix-turn-helix domain (DUF2582) | 0.0054 | 59-94 / 22-57 |
PF10007.8 | Uncharacterized protein conserved in archaea (DUF2250) | 0.0077 | 60-93 / 23-56 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0005667 | transcription factor complex |
GO:0004252 | serine-type endopeptidase activity |
GO:0006508 | proteolysis |
GO:0006260 | DNA replication |
GO:0003700 | DNA binding transcription factor activity |
GO:0006355 | regulation of transcription, DNA-templated |