phrog_7735 is made of 15 protein sequences and is annotated as "excisionase"
Functional category: integration and excision


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
83.4 134 74


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p109736 no NCBI prot ID no annotation VI_12389 Spirochaetia_gi_483581511 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p133720 no NCBI prot ID no annotation VI_12424 Spirochaetia_gi_523627096 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p126682 no NCBI prot ID no annotation VI_12413 Spirochaetia_gi_469807565 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p303218 no NCBI prot ID no annotation VI_12425 Spirochaetia_gi_523645358 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p237641 no NCBI prot ID no annotation VI_12430 Spirochaetia_gi_523646099_0_33046 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p248869 no NCBI prot ID no annotation VI_12433 Spirochaetia_gi_523646440 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p23071 no NCBI prot ID no annotation VI_12446 Spirochaetia_gi_480994565 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p149881 no NCBI prot ID no annotation VI_12338 Spirochaetia_gi_417776938 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p198591 no NCBI prot ID no annotation VI_12451 Spirochaetia_gi_480995254 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p36684 no NCBI prot ID no annotation VI_12333 Spirochaetia_gi_477563916 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p89997 no NCBI prot ID no annotation VI_12297 Negativicutes_gi_282848843_4123_50458 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p239377 no NCBI prot ID no annotation VI_01298 Clostridia_gi_331268188_1296309_1329168 Viruses.
p212388 no NCBI prot ID no annotation VI_05780 Clostridia_gi_485044578 Viruses.
p308427 no NCBI prot ID no annotation VI_12312 Negativicutes_gi_522418631_4500_29331 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p176177 no NCBI prot ID no annotation VI_01163 Clostridia_gi_375092752_1310461_1348892 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_286 431 no annotation unknown function 10 2.01E-32 22.82
phrog_7199 16 RNA polymerase DNA, RNA and nucleotide metabolism 2 4.47E-12 2.47

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11671 no annotation unknown function 93.6 0.0084 12-61 / 2-52
phrog_11967 no annotation unknown function 92.3 0.021 15-46 / 13-44
phrog_1373 transcriptional regulator transcription regulation 91.7 0.03 18-39 / 45-66
phrog_1729 no annotation unknown function 90.0 0.064 18-62 / 85-128
phrog_1840 excisionase integration and excision 92.2 0.023 14-66 / 3-56
phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 93.4 0.0094 17-42 / 37-62
phrog_2474 MerR-like transcriptional regulator transcription regulation 90.9 0.044 14-64 / 12-63
phrog_2655 excisionase integration and excision 93.2 0.011 15-40 / 5-30
phrog_268 no annotation unknown function 91.8 0.028 19-41 / 18-40
phrog_2790 excisionase and transcriptional regulator integration and excision 90.5 0.053 10-68 / 30-89
phrog_28156 no annotation unknown function 90.0 0.065 12-47 / 4-39
phrog_2907 excisionase integration and excision 95.8 0.0003 14-67 / 2-59
phrog_3470 no annotation unknown function 93.5 0.0091 14-38 / 3-27
phrog_3 transcriptional repressor transcription regulation 92.5 0.019 16-42 / 15-40
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 92.7 0.016 18-46 / 21-49
phrog_4691 excisionase integration and excision 93.0 0.013 16-63 / 17-64
phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 92.0 0.026 15-63 / 2-57
phrog_4779 transcriptional regulator transcription regulation 92.7 0.016 18-55 / 15-52
phrog_5119 no annotation unknown function 91.6 0.033 16-39 / 65-88
phrog_575 Cox-like excisionase and repressor integration and excision 93.2 0.011 13-49 / 9-45
phrog_57 terminase small subunit head and packaging 96.1 0.00014 16-64 / 1-50
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 94.1 0.0051 12-37 / 9-35
phrog_638 transcriptional regulator transcription regulation 90.1 0.063 14-42 / 13-41
phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism 95.8 0.00031 16-64 / 8-56
phrog_6620 transposase integration and excision 94.9 0.0017 17-67 / 3-54
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 90.9 0.044 15-44 / 17-46
phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 93.1 0.012 11-64 / 30-82
phrog_66 excisionase and transcriptional regulator integration and excision 97.7 8.8E-08 12-67 / 4-59
phrog_7950 transcriptional repressor transcription regulation 92.1 0.024 17-40 / 22-45
phrog_8008 DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.041 20-48 / 17-45
phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 90.8 0.046 18-46 / 19-47
phrog_8 transcriptional regulator transcription regulation 90.9 0.044 18-40 / 15-36
phrog_9099 no annotation unknown function 92.2 0.023 13-64 / 55-107

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF13591.5 MerR HTH family regulatory protein 5.9E-11 18-65 / 1-49
PF08876.10 Domain of unknown function (DUF1836) 1.9E-09 16-85 / 9-83
PF11112.7 Pyocin activator protein PrtN 4E-09 14-65 / 10-69
PF12964.6 Protein of unknown function (DUF3853) 8.3E-09 13-63 / 41-94
PF13411.5 MerR HTH family regulatory protein 3.2E-08 18-65 / 1-51
PF06806.11 Putative excisionase (DUF1233) 3.2E-08 12-64 / 4-68
PF09035.9 Excisionase from transposon Tn916 4E-08 11-64 / 9-65
PF16701.4 Adenylate cyclase regulatory domain 4.2E-08 15-83 / 56-123
PF07825.10 Excisionase-like protein 5.5E-08 17-58 / 2-48
PF10743.8 Regulatory phage protein cox 1.3E-07 13-65 / 7-66
PF07618.10 Protein of unknown function (DUF1580) 1.5E-07 17-64 / 2-55
PF17443.1 Uncharacterized protein pXO2-72 1.5E-07 12-41 / 3-32
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 1.7E-07 16-61 / 2-51
PF12728.6 Helix-turn-helix domain 3.5E-07 17-62 / 1-48
PF07471.11 Phage DNA packaging protein Nu1 3.8E-07 17-65 / 2-56
PF07278.10 Protein of unknown function (DUF1441) 1.9E-06 18-65 / 2-50
PF00376.22 MerR family regulatory protein 5.6E-06 19-46 / 1-28
PF04936.11 Protein of unknown function (DUF658) 0.0013 16-46 / 87-117
PF07453.12 NUMOD1 domain 0.00033 15-37 / 17-39
PF13171.5 Protein of unknown function (DUF4004) 0.00038 17-45 / 2-30
PF10654.8 Protein of unknown function (DUF2481) 0.0007 15-40 / 78-103
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.001 18-39 / 52-73
PF00356.20 Bacterial regulatory proteins, lacI family 0.0012 19-41 / 1-23
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0017 12-41 / 18-47
PF07141.10 Putative bacteriophage terminase small subunit 0.0017 16-40 / 30-54
PF13413.5 Helix-turn-helix domain 0.0018 14-40 / 6-32
PF01381.21 Helix-turn-helix 0.0018 15-40 / 7-32
PF08535.9 KorB domain 0.002 17-41 / 3-27
PF13309.5 HTH domain 0.0021 18-38 / 42-62
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0021 17-41 / 13-37
PF07106.12 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) 0.0024 15-46 / 14-51
PF06322.10 Phage NinH protein 0.0025 16-43 / 15-42
PF02954.18 Bacterial regulatory protein, Fis family 0.0028 16-39 / 15-38
PF14210.5 Domain of unknown function (DUF4322) 0.0027 19-39 / 45-65
PF07037.10 Putative transcription regulator (DUF1323) 0.0029 18-40 / 1-23
PF06971.12 Putative DNA-binding protein N-terminus 0.0031 17-38 / 27-48
PF09607.9 Brinker DNA-binding domain 0.0032 18-40 / 26-48
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0037 18-40 / 24-46
PF08765.10 Mor transcription activator family 0.0037 17-41 / 72-96
PF04552.12 Sigma-54, DNA binding domain 0.0039 14-41 / 45-72
PF13338.5 Transcriptional regulator, AbiEi antitoxin 0.0043 14-46 / 10-41
PF00440.22 Bacterial regulatory proteins, tetR family 0.0048 18-40 / 16-38
PF02042.14 RWP-RK domain 0.0048 14-41 / 9-36
PF08222.10 CodY helix-turn-helix domain 0.0053 16-45 / 3-36
PF12759.6 InsA C-terminal domain 0.0055 17-39 / 21-43
PF07750.10 GcrA cell cycle regulator 0.0054 16-44 / 17-46
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0062 15-39 / 21-45
PF05344.10 Domain of Unknown Function (DUF746) 0.0065 16-40 / 11-35
PF13412.5 Winged helix-turn-helix DNA-binding 0.007 16-40 / 16-40
PF02796.14 Helix-turn-helix domain of resolvase 0.0072 17-39 / 21-43
PF00292.17 'Paired box' domain 0.0078 16-40 / 32-56
PF08822.10 Protein of unknown function (DUF1804) 0.0079 16-40 / 18-42
PF13936.5 Helix-turn-helix domain 0.008 17-39 / 20-42
PF13404.5 AsnC-type helix-turn-helix domain 0.0083 15-39 / 15-39
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0089 16-40 / 18-42
PF12116.7 Stage III sporulation protein D 0.0089 16-41 / 18-43

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0043565 sequence-specific DNA binding
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0003700 DNA binding transcription factor activity
GO:0000150 recombinase activity
GO:0005524 ATP binding
GO:0045892 negative regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0005667 transcription factor complex
GO:0051775 response to redox state
GO:0007131 reciprocal meiotic recombination
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated

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