Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
69.79 | 89 | 77 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
KR093644_p35 | AKI27866.1 | hypothetical protein | KR093644 | Moraxella phage Mcat20 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
KR093637_p43 | AKI27582.1 | hypothetical protein | KR093637 | Moraxella phage Mcat13 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p120101 | no NCBI prot ID | no annotation | VI_06626 | Gammaproteobacteria_gi_257455533_8222_51655 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
NC_028855_p67 | YP_009203586.1 | hypothetical protein | NC_028855 | Acinetobacter phage YMC11/12/R2315 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Obolenskvirus; unclassified Obolenskvirus. |
JX976549_p57 | AFV51541.1 | hypothetical protein | JX976549 | Acinetobacter phage IME-AB2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Obolenskvirus; Acinetobacter virus AB2. |
NC_024785_p29 | YP_009055450.1 | hypothetical protein | NC_024785 | Acinetobacter phage YMC-13-01-C62 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Obolenskvirus. |
NC_031117_p46 | YP_009291918.1 | hypothetical protein | NC_031117 | Acinetobacter phage LZ35 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Obolenskvirus; Acinetobacter virus LZ35. |
p378140 | no NCBI prot ID | no annotation | VI_02915 | Gammaproteobacteria_gi_425405616 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
KU238067_p3 | ANJ65571.1 | hypothetical protein | KU238067 | Stx converting phage vB_EcoS_P27 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus. |
p428355 | no NCBI prot ID | no annotation | VI_08334 | Gammaproteobacteria_gi_419898589 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lambdavirus; unclassified Lambdavirus. |
p374127 | no NCBI prot ID | no annotation | VI_02222 | Gammaproteobacteria_gi_425399532 | Viruses. |
NC_008464_p40 | YP_794087.1 | hypothetical protein | NC_008464 | Stx2-converting phage 86 (Stx2-converting bacteriophage 8) | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus. |
KP682381_p6 | AKI86726.1 | hypothetical protein | KP682381 | Escherichia phage PA28 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; Escherichia virus PA28. |
AP012533_p6 | BAT32152.1 | hypothetical protein | AP012533 | Stx2-converting phage Stx2a_F723 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_676 | 209 | no annotation | unknown function | 7 | 1.79E-25 | 15.87 |
phrog_359 | 350 | DNA methyltransferase | other | 7 | 1.17E-23 | 14.05 |
phrog_6424 | 19 | no annotation | unknown function | 2 | 5.42E-12 | 2.39 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_11187 | transcriptional regulator | transcription regulation | 93.4 | 0.0098 | 1-36 / 2-43 |
phrog_1124 | transcriptional regulator | transcription regulation | 91.5 | 0.033 | 12-56 / 18-62 |
phrog_1229 | no annotation | unknown function | 97.7 | 6.4E-08 | 7-56 / 1-61 |
phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 91.9 | 0.027 | 6-39 / 10-45 |
phrog_1373 | transcriptional regulator | transcription regulation | 95.0 | 0.0015 | 14-39 / 45-70 |
phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 95.4 | 0.00078 | 14-39 / 24-49 |
phrog_14131 | DNA binding protein | DNA, RNA and nucleotide metabolism | 90.3 | 0.058 | 4-33 / 162-194 |
phrog_1468 | transcriptional repressor | transcription regulation | 96.0 | 0.00016 | 9-39 / 15-46 |
phrog_147 | transcriptional regulator | transcription regulation | 93.6 | 0.0082 | 13-56 / 15-58 |
phrog_1529 | no annotation | unknown function | 97.2 | 1.6E-06 | 4-48 / 5-51 |
phrog_17493 | no annotation | unknown function | 92.0 | 0.026 | 1-57 / 38-93 |
phrog_17740 | no annotation | unknown function | 91.0 | 0.042 | 5-41 / 6-45 |
phrog_18376 | no annotation | unknown function | 98.2 | 1.8E-09 | 2-61 / 79-139 |
phrog_2119 | no annotation | unknown function | 90.7 | 0.049 | 1-39 / 15-53 |
phrog_2136 | no annotation | unknown function | 92.2 | 0.023 | 15-51 / 43-78 |
phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 94.2 | 0.0044 | 14-38 / 38-62 |
phrog_2439 | transcriptional regulator | transcription regulation | 90.6 | 0.05 | 14-50 / 20-54 |
phrog_268 | no annotation | unknown function | 90.0 | 0.063 | 14-41 / 17-44 |
phrog_2967 | transcriptional regulator | transcription regulation | 95.5 | 0.00053 | 5-49 / 11-58 |
phrog_296 | DNA transposition protein | integration and excision | 93.0 | 0.013 | 6-39 / 5-40 |
phrog_351 | RNA polymerase sigma factor | transcription regulation | 91.8 | 0.029 | 12-39 / 193-220 |
phrog_3557 | transcriptional regulator | transcription regulation | 93.5 | 0.009 | 11-39 / 23-51 |
phrog_35 | transcriptional repressor | transcription regulation | 91.7 | 0.031 | 14-36 / 14-36 |
phrog_3 | transcriptional repressor | transcription regulation | 93.9 | 0.0059 | 12-37 / 15-40 |
phrog_4583 | transcriptional repressor | transcription regulation | 95.6 | 0.00051 | 6-39 / 14-49 |
phrog_4779 | transcriptional regulator | transcription regulation | 95.8 | 0.0003 | 5-39 / 4-40 |
phrog_5536 | no annotation | unknown function | 91.0 | 0.042 | 6-50 / 13-55 |
phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 90.5 | 0.052 | 14-39 / 112-137 |
phrog_6156 | endonuclease | DNA, RNA and nucleotide metabolism | 91.6 | 0.032 | 6-38 / 26-59 |
phrog_6223 | transcriptional repressor | transcription regulation | 97.4 | 4E-07 | 14-58 / 18-61 |
phrog_638 | transcriptional regulator | transcription regulation | 96.1 | 0.00011 | 3-59 / 3-72 |
phrog_6831 | transcriptional regulator | transcription regulation | 99.2 | 7.8E-15 | 1-58 / 2-60 |
phrog_7126 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 96.1 | 0.00011 | 6-51 / 22-66 |
phrog_7241 | transcriptional regulator | transcription regulation | 94.0 | 0.0053 | 14-44 / 75-105 |
phrog_725 | CII-like regulator | transcription regulation | 93.4 | 0.0097 | 13-35 / 27-49 |
phrog_8 | transcriptional regulator | transcription regulation | 95.0 | 0.0016 | 6-51 / 5-48 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF10078.8 | Uncharacterized protein conserved in bacteria (DUF2316) | 5.6E-09 | 5-42 / 9-48 |
PF14590.5 | Domain of unknown function (DUF4447) | 3E-07 | 5-43 / 6-46 |
PF04645.11 | Protein of unknown function, DUF603 | 3.1E-07 | 4-56 / 5-60 |
PF05339.10 | Protein of unknown function (DUF739) | 4.3E-07 | 18-58 / 17-55 |
PF01381.21 | Helix-turn-helix | 6E-07 | 18-58 / 10-48 |
PF00356.20 | Bacterial regulatory proteins, lacI family | 1.2E-06 | 19-43 / 1-25 |
PF13744.5 | Helix-turn-helix domain | 1.5E-06 | 18-58 / 32-71 |
PF13413.5 | Helix-turn-helix domain | 2.1E-06 | 18-42 / 10-34 |
PF12116.7 | Stage III sporulation protein D | 3.2E-06 | 18-58 / 20-59 |
PF10654.8 | Protein of unknown function (DUF2481) | 4.9E-06 | 18-42 / 81-105 |
PF13443.5 | Cro/C1-type HTH DNA-binding domain | 5.9E-06 | 18-58 / 11-52 |
PF04814.12 | Hepatocyte nuclear factor 1 (HNF-1), N terminus | 5.9E-06 | 18-56 / 127-163 |
PF07022.12 | Bacteriophage CI repressor helix-turn-helix domain | 6.2E-06 | 18-58 / 12-50 |
PF13560.5 | Helix-turn-helix domain | 6.2E-06 | 10-55 / 5-50 |
PF12844.6 | Helix-turn-helix domain | 7.1E-06 | 18-57 / 13-50 |
PF08667.9 | BetR domain | 8.4E-06 | 6-58 / 5-61 |
PF15731.4 | Antitoxin component of bacterial toxin-antitoxin system, MqsA | 1.3E-05 | 18-43 / 83-108 |
PF00157.16 | Pou domain - N-terminal to homeobox domain | 2.1E-05 | 6-41 / 7-50 |
PF05269.10 | Bacteriophage CII protein | 2.2E-05 | 18-56 / 24-59 |
PF08535.9 | KorB domain | 0.0001 | 18-41 / 4-27 |
PF15943.4 | Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT | 0.0001 | 18-58 / 9-47 |
PF06806.11 | Putative excisionase (DUF1233) | 0.00012 | 18-41 / 10-33 |
PF00376.22 | MerR family regulatory protein | 0.00017 | 20-41 / 2-23 |
PF17443.1 | Uncharacterized protein pXO2-72 | 0.00019 | 18-41 / 9-32 |
PF06056.11 | Putative ATPase subunit of terminase (gpP-like) | 0.00023 | 18-42 / 14-38 |
PF07453.12 | NUMOD1 domain | 0.00024 | 18-37 / 20-39 |
PF07278.10 | Protein of unknown function (DUF1441) | 0.00026 | 18-41 / 2-25 |
PF05930.11 | Prophage CP4-57 regulatory protein (AlpA) | 0.0004 | 18-39 / 4-25 |
PF06322.10 | Phage NinH protein | 0.0004 | 18-42 / 17-41 |
PF13411.5 | MerR HTH family regulatory protein | 0.00041 | 19-41 / 2-24 |
PF13591.5 | MerR HTH family regulatory protein | 0.00047 | 18-41 / 1-24 |
PF13693.5 | Winged helix-turn-helix DNA-binding | 0.00048 | 18-41 / 16-39 |
PF09035.9 | Excisionase from transposon Tn916 | 0.00052 | 18-38 / 16-36 |
PF04552.12 | Sigma-54, DNA binding domain | 0.00053 | 18-41 / 49-72 |
PF07037.10 | Putative transcription regulator (DUF1323) | 0.00056 | 18-40 / 1-23 |
PF14549.5 | DNA-binding transcriptional regulator Cro | 0.00058 | 19-37 / 11-29 |
PF02376.14 | CUT domain | 0.00059 | 6-41 / 7-45 |
PF11112.7 | Pyocin activator protein PrtN | 0.00066 | 18-42 / 14-39 |
PF02042.14 | RWP-RK domain | 0.00071 | 18-41 / 13-36 |
PF07141.10 | Putative bacteriophage terminase small subunit | 0.00068 | 18-41 / 32-55 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 0.0007 | 19-39 / 53-73 |
PF01371.18 | Trp repressor protein | 0.00098 | 18-42 / 49-73 |
PF10743.8 | Regulatory phage protein cox | 0.0011 | 18-42 / 12-36 |
PF07506.10 | RepB plasmid partitioning protein | 0.0012 | 11-41 / 14-45 |
PF04936.11 | Protein of unknown function (DUF658) | 0.0012 | 18-41 / 15-38 |
PF02954.18 | Bacterial regulatory protein, Fis family | 0.0014 | 18-39 / 17-38 |
PF07825.10 | Excisionase-like protein | 0.0014 | 18-41 / 3-28 |
PF06892.10 | Phage regulatory protein CII (CP76) | 0.0014 | 18-56 / 20-58 |
PF07471.11 | Phage DNA packaging protein Nu1 | 0.0015 | 18-40 / 3-25 |
PF12728.6 | Helix-turn-helix domain | 0.0016 | 18-41 / 2-26 |
PF12759.6 | InsA C-terminal domain | 0.0018 | 18-39 / 22-43 |
PF04218.12 | CENP-B N-terminal DNA-binding domain | 0.0019 | 18-40 / 24-46 |
PF12964.6 | Protein of unknown function (DUF3853) | 0.002 | 18-42 / 46-70 |
PF13309.5 | HTH domain | 0.0021 | 19-38 / 43-62 |
PF12824.6 | Mitochondrial ribosomal protein subunit L20 | 0.0021 | 18-42 / 108-132 |
PF08765.10 | Mor transcription activator family | 0.0024 | 18-42 / 73-97 |
PF05344.10 | Domain of Unknown Function (DUF746) | 0.0026 | 18-41 / 13-36 |
PF00440.22 | Bacterial regulatory proteins, tetR family | 0.0027 | 18-41 / 16-39 |
PF02796.14 | Helix-turn-helix domain of resolvase | 0.0033 | 18-39 / 22-43 |
PF13613.5 | Helix-turn-helix of DDE superfamily endonuclease | 0.0037 | 18-40 / 20-42 |
PF01710.15 | Transposase | 0.0038 | 18-40 / 19-41 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 0.0039 | 18-40 / 24-46 |
PF06971.12 | Putative DNA-binding protein N-terminus | 0.0042 | 18-38 / 28-48 |
PF03333.12 | Adhesin biosynthesis transcription regulatory protein | 0.0046 | 18-41 / 56-79 |
PF13404.5 | AsnC-type helix-turn-helix domain | 0.0053 | 18-39 / 18-39 |
PF09607.9 | Brinker DNA-binding domain | 0.0054 | 18-41 / 26-49 |
PF05225.15 | helix-turn-helix, Psq domain | 0.0058 | 18-40 / 17-40 |
PF08822.10 | Protein of unknown function (DUF1804) | 0.0059 | 18-40 / 20-42 |
PF16221.4 | winged helix-turn-helix | 0.0062 | 18-40 / 47-69 |
PF08222.10 | CodY helix-turn-helix domain | 0.0069 | 18-40 / 5-27 |
PF13542.5 | Helix-turn-helix domain of transposase family ISL3 | 0.0072 | 19-39 / 28-48 |
PF13171.5 | Protein of unknown function (DUF4004) | 0.0069 | 18-41 / 3-26 |
PF04492.12 | Bacteriophage replication protein O | 0.0074 | 18-40 / 50-72 |
PF00292.17 | 'Paired box' domain | 0.0079 | 18-40 / 34-56 |
PF13556.5 | PucR C-terminal helix-turn-helix domain | 0.0081 | 18-40 / 13-35 |
PF13412.5 | Winged helix-turn-helix DNA-binding | 0.0086 | 18-40 / 18-40 |
PF06413.10 | Neugrin | 0.0082 | 18-41 / 30-53 |
PF04967.11 | HTH DNA binding domain | 0.0092 | 18-40 / 24-46 |
PF10975.7 | Protein of unknown function (DUF2802) | 0.0088 | 18-37 / 44-63 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0045893 | positive regulation of transcription, DNA-templated |
GO:0006260 | DNA replication |
GO:0005622 | intracellular |
GO:0005667 | transcription factor complex |
GO:0045892 | negative regulation of transcription, DNA-templated |
GO:0003700 | DNA binding transcription factor activity |
GO:0000150 | recombinase activity |
GO:0006310 | DNA recombination |
GO:0003677 | DNA binding |
GO:0051775 | response to redox state |
GO:0005737 | cytoplasm |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0019069 | viral capsid assembly |
GO:0005524 | ATP binding |
GO:0005634 | nucleus |
GO:0043565 | sequence-specific DNA binding |