Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
177.23 | 277 | 173 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
NC_004302_p2 | NP_695030.1 | ORF2 | NC_004302 | Lactococcus phage r1t | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p154023 | no NCBI prot ID | no annotation | VI_04550 | Bacilli_gi_485066273_238_40694 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_031040_p2 | YP_009283198.1 | Sie protein | NC_031040 | Lactococcus phage 50101 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
KX456212_p2 | ANS02647.1 | Sie protein | KX456212 | Lactococcus phage 86501 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
NC_031064_p2 | YP_009286316.1 | Sie protein | NC_031064 | Lactococcus phage 98201 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
NC_005822_p2 | NP_996676.1 | Orf173 | NC_005822 | Lactococcus phage phiLC3 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
NC_002703_p2 | NP_108681.1 | hypothetical protein | NC_002703 | Lactococcus phage Tuc2009 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p157690 | no NCBI prot ID | no annotation | VI_00842 | Bacilli_gi_389853198_779839_819962 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p157628 | no NCBI prot ID | no annotation | VI_00774 | Bacilli_gi_125622882_779007_819130 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p302965 | no NCBI prot ID | no annotation | VI_05539 | Betaproteobacteria_gi_171316474_21791_47298 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus; unclassified Peduovirus. |
p389892 | no NCBI prot ID | no annotation | VI_07708 | Gammaproteobacteria_gi_483970258 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p230820 | no NCBI prot ID | no annotation | VI_03463 | Gammaproteobacteria_gi_386612163_294934_328684 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p1288 | no NCBI prot ID | no annotation | VI_02571 | Gammaproteobacteria_gi_491255701 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_1 | 5879 | integrase | integration and excision | 9 | 8.45E-17 | 7.19 |
phrog_4 | 3265 | transcriptional repressor | transcription regulation | 6 | 1.34E-12 | 3.0 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_13333 | no annotation | unknown function | 99.2 | 2.7E-15 | 70-173 / 65-167 |
phrog_14275 | no annotation | unknown function | 96.6 | 2.3E-05 | 7-42 / 26-61 |
phrog_23980 | no annotation | unknown function | 96.0 | 0.00019 | 8-122 / 5-103 |
phrog_4980 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 97.2 | 1.8E-06 | 11-45 / 1-35 |
phrog_6148 | beta-lactamase-inhibitor protein BLIP | moron, auxiliary metabolic gene and host takeover | 92.9 | 0.015 | 14-115 / 1-105 |
phrog_7321 | no annotation | unknown function | 93.3 | 0.01 | 12-46 / 55-89 |
phrog_806 | no annotation | unknown function | 96.2 | 9.8E-05 | 13-44 / 1-32 |
phrog_8263 | no annotation | unknown function | 93.7 | 0.0077 | 11-43 / 1-33 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF12869.6 | tRNA_anti-like | 2E-16 | 100-211 / 67-183 |
PF09889.8 | Uncharacterized protein containing a Zn-ribbon (DUF2116) | 1.7E-07 | 2-30 / 2-31 |
PF10571.8 | Uncharacterised protein family UPF0547 | 2.6E-05 | 4-28 / 1-24 |
PF13240.5 | zinc-ribbon domain | 2.7E-05 | 5-27 / 1-24 |
PF13248.5 | zinc-ribbon domain | 8.1E-05 | 3-27 / 2-26 |
PF14446.5 | Prokaryotic RING finger family 1 | 0.00017 | 3-32 / 4-35 |
PF11023.7 | Zinc-ribbon containing domain | 0.00027 | 3-32 / 67-98 |
PF09538.9 | Protein of unknown function (FYDLN_acid) | 0.0003 | 3-30 / 9-39 |
PF08792.9 | A2L zinc ribbon domain | 0.00034 | 2-28 / 2-32 |
PF16919.4 | Protein kinase G rubredoxin domain | 0.00036 | 3-30 / 85-120 |
PF06044.11 | Dam-replacing family | 0.0012 | 3-32 / 31-68 |
PF02150.15 | RNA polymerases M/15 Kd subunit | 0.0014 | 4-29 / 2-29 |
PF12773.6 | Double zinc ribbon | 0.0014 | 6-28 / 1-23 |
PF08274.11 | PhnA Zinc-Ribbon | 0.0017 | 3-27 / 2-29 |
PF07191.11 | zinc-ribbons | 0.0035 | 5-27 / 2-26 |
PF17032.4 | zinc-ribbon family | 0.0034 | 3-24 / 82-103 |
PF14205.5 | Cysteine-rich KTR | 0.0037 | 3-31 / 3-41 |
PF08772.10 | Nin one binding (NOB1) Zn-ribbon like | 0.0059 | 3-28 / 8-34 |
PF12172.7 | Rubredoxin-like zinc ribbon domain (DUF35_N) | 0.0058 | 3-25 / 11-33 |
PF09862.8 | Protein of unknown function (DUF2089) | 0.0058 | 6-29 / 1-24 |
PF08271.11 | TFIIB zinc-binding | 0.0072 | 4-30 / 1-32 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0006351 | transcription, DNA-templated |
GO:0005887 | integral component of plasma membrane |