phrog_8711 is made of 13 protein sequences and is annotated as "terminase large subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
86.92 156 78


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p356714 no NCBI prot ID no annotation VI_06144 Clostridia_gi_545050231 Viruses.
p22373 no NCBI prot ID no annotation VI_05995 Clostridia_gi_545005980 Viruses.
p436988 no NCBI prot ID no annotation VI_05768 Clostridia_gi_215539458 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p379366 no NCBI prot ID no annotation VI_06142 Clostridia_gi_545050181 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p335815 no NCBI prot ID no annotation VI_05987 Clostridia_gi_545003308_33321_54980 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p182112 no NCBI prot ID no annotation VI_00755 Bacilli_gi_28894912_545611_583628 Viruses; unclassified bacterial viruses.
p181999 no NCBI prot ID no annotation VI_00751 Bacilli_gi_21909536_1313257_1351275 Viruses; unclassified bacterial viruses.
p367043 no NCBI prot ID no annotation VI_04381 Bacilli_gi_197918713 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_004588_p27 NP_795631.1 putative terminase large subunit NC_004588 Streptococcus phage 315.5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_027990_p55 YP_009168585.1 putative terminase large subunit NC_027990 Lactobacillus phage LBR48 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Anamdongvirus; Lactobacillus virus LBR48.
KY653116_p41 ARM67789.1 terminase large subunit KY653116 Staphylococcus phage IME1318_01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p412545 no NCBI prot ID no annotation VI_05895 Clostridia_gi_544977368 Viruses.
p139690 no NCBI prot ID no annotation VI_00806 Bacilli_gi_556589855_694981_736805 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_509 268 terminase small subunit head and packaging 6 3.26E-20 10.61
phrog_2538 57 terminase small subunit head and packaging 3 1.06E-13 4.1
phrog_22023 3 no annotation unknown function 2 1.27E-14 5.02

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_2 terminase large subunit head and packaging 96.3 5.8E-05 16-71 / 12-65
phrog_3717 terminase large subunit head and packaging 99.9 7.5E-27 8-78 / 3-75
phrog_7035 no annotation unknown function 92.5 0.019 24-60 / 170-206
phrog_9526 terminase large subunit head and packaging 90.5 0.054 25-68 / 21-63
phrog_979 terminase large subunit head and packaging 93.3 0.011 24-68 / 24-68

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04466.12 Phage terminase large subunit 5.7E-11 38-152 / 2-113
PF07517.13 SecA DEAD-like domain 1.1E-10 23-90 / 89-153
PF02562.15 PhoH-like protein 3.4E-10 24-77 / 4-59
PF07652.13 Flavivirus DEAD domain 1.1E-09 37-77 / 4-43
PF06862.11 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 3.5E-09 27-61 / 2-47
PF14617.5 U3-containing 90S pre-ribosomal complex subunit 5.6E-09 24-90 / 64-140
PF00270.28 DEAD/DEAH box helicase 8.6E-09 28-77 / 3-55
PF13872.5 P-loop containing NTP hydrolase pore-1 1E-08 23-90 / 34-111
PF02399.14 Origin of replication binding protein 1.4E-08 36-89 / 48-99
PF00176.22 SNF2 family N-terminal domain 4.3E-08 38-59 / 18-39
PF05876.11 Phage terminase large subunit (GpA) 4.4E-08 22-152 / 21-150
PF04851.14 Type III restriction enzyme, res subunit 5.5E-08 25-58 / 4-44
PF03237.14 Terminase-like family 8.4E-08 41-81 / 1-41
PF12340.7 Protein of unknown function (DUF3638) 2.7E-07 21-59 / 19-62
PF03354.14 Phage Terminase 3.6E-07 37-152 / 23-132
PF13086.5 AAA domain 5.5E-07 25-77 / 2-57
PF09848.8 Uncharacterized conserved protein (DUF2075) 2.2E-06 38-59 / 2-23
PF05127.13 Helicase 3.8E-06 41-59 / 1-19
PF00580.20 UvrD/REP helicase N-terminal domain 5.2E-06 27-77 / 3-55
PF02500.14 Probable DNA packing protein, N-terminus 0.0002 38-91 / 176-228
PF13604.5 AAA domain 0.00022 26-57 / 3-36
PF13245.5 AAA domain 0.00036 36-59 / 10-33
PF13173.5 AAA domain 0.00051 38-56 / 3-21
PF00625.20 Guanylate kinase 0.00074 38-56 / 3-21
PF07931.11 Chloramphenicol phosphotransferase-like protein 0.00087 39-55 / 3-19
PF06414.11 Zeta toxin 0.00091 36-56 / 13-33
PF03976.13 Polyphosphate kinase 2 (PPK2) 0.00099 37-56 / 28-47
PF05970.13 PIF1-like helicase 0.0011 36-57 / 21-42
PF13671.5 AAA domain 0.0012 40-56 / 2-18
PF13521.5 AAA domain 0.0013 40-56 / 2-18
PF05894.11 Podovirus DNA encapsidation protein (Gp16) 0.0012 37-77 / 17-56
PF12846.6 AAA-like domain 0.0013 36-55 / 20-39
PF03266.14 NTPase 0.0014 40-57 / 2-19
PF02702.16 Osmosensitive K+ channel His kinase sensor domain 0.0015 37-58 / 4-25
PF01745.15 Isopentenyl transferase 0.0015 39-57 / 3-21
PF13238.5 AAA domain 0.0016 40-56 / 1-17
PF10649.8 Protein of unknown function (DUF2478) 0.0016 41-59 / 2-20
PF02572.14 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 0.0016 39-60 / 2-23
PF10412.8 Type IV secretion-system coupling protein DNA-binding domain 0.0018 36-54 / 14-32
PF01443.17 Viral (Superfamily 1) RNA helicase 0.0018 41-57 / 2-18
PF01712.18 Deoxynucleoside kinase 0.0019 40-56 / 1-17
PF05729.11 NACHT domain 0.0019 39-56 / 2-19
PF00910.21 RNA helicase 0.0021 41-56 / 2-17
PF02283.15 Cobinamide kinase / cobinamide phosphate guanyltransferase 0.0023 41-58 / 2-19
PF00308.17 Bacterial dnaA protein 0.0026 37-57 / 33-53
PF08303.10 tRNA ligase kinase domain 0.0026 40-55 / 2-17
PF00006.24 ATP synthase alpha/beta family, nucleotide-binding domain 0.0028 36-57 / 13-34
PF01637.17 ATPase domain predominantly from Archaea 0.003 37-58 / 20-41
PF06431.10 Polyomavirus large T antigen C-terminus 0.0029 37-56 / 155-174
PF12775.6 P-loop containing dynein motor region D3 0.0031 36-56 / 32-52
PF00158.25 Sigma-54 interaction domain 0.0032 36-56 / 21-41
PF13401.5 AAA domain 0.0032 38-57 / 6-25
PF01121.19 Dephospho-CoA kinase 0.0032 40-56 / 3-19
PF05872.11 Bacterial protein of unknown function (DUF853) 0.0032 36-57 / 20-41
PF04275.13 Phosphomevalonate kinase 0.0033 42-57 / 1-16
PF00004.28 ATPase family associated with various cellular activities (AAA) 0.0035 41-56 / 2-17
PF07728.13 AAA domain (dynein-related subfamily) 0.0035 40-56 / 2-18
PF05621.10 Bacterial TniB protein 0.0035 38-57 / 39-58
PF09820.8 Predicted AAA-ATPase 0.0035 36-57 / 30-51
PF00485.17 Phosphoribulokinase / Uridine kinase family 0.0035 40-56 / 2-18
PF02223.16 Thymidylate kinase 0.0036 42-57 / 1-16
PF08433.9 Chromatin associated protein KTI12 0.0036 39-56 / 3-20
PF01591.17 6-phosphofructo-2-kinase 0.0037 37-56 / 9-28
PF13177.5 DNA polymerase III, delta subunit 0.0036 37-58 / 19-40
PF01078.20 Magnesium chelatase, subunit ChlI 0.004 36-56 / 21-41
PF01935.16 Domain of unknown function DUF87 0.004 37-58 / 25-46
PF13189.5 Cytidylate kinase-like family 0.0041 40-56 / 2-18
PF05496.11 Holliday junction DNA helicase ruvB N-terminus 0.0043 37-56 / 45-64
PF07726.10 ATPase family associated with various cellular activities (AAA) 0.0045 40-56 / 2-18
PF03969.15 AFG1-like ATPase 0.0043 37-56 / 67-86
PF04665.11 Poxvirus A32 protein 0.0045 36-56 / 12-32
PF03215.14 Rad17 cell cycle checkpoint protein 0.0044 37-56 / 45-64
PF05707.11 Zonular occludens toxin (Zot) 0.0046 40-57 / 3-20
PF12774.6 Hydrolytic ATP binding site of dynein motor region D1 0.0049 36-55 / 31-50
PF00265.17 Thymidine kinase 0.0056 39-58 / 3-22
PF01926.22 50S ribosome-binding GTPase 0.0058 40-57 / 2-19
PF05272.10 Virulence-associated protein E 0.0059 37-56 / 59-78
PF00406.21 Adenylate kinase 0.0065 42-56 / 1-15
PF07693.13 KAP family P-loop domain 0.0066 37-56 / 31-50
PF12780.6 P-loop containing dynein motor region D4 0.0066 36-55 / 30-49
PF10236.8 Mitochondrial ribosomal death-associated protein 3 0.0064 36-56 / 23-43
PF14532.5 Sigma-54 interaction domain 0.007 37-57 / 21-41
PF05673.12 Protein of unknown function (DUF815) 0.0074 37-56 / 54-73
PF14516.5 AAA-like domain 0.0076 36-56 / 29-49
PF03668.14 P-loop ATPase protein family 0.0072 39-55 / 3-19
PF02224.17 Cytidylate kinase 0.0074 41-56 / 2-17
PF00493.22 MCM2/3/5 family 0.0081 39-56 / 59-76
PF00437.19 Type II/IV secretion system protein 0.008 36-57 / 129-150
PF10443.8 RNA12 protein 0.0085 37-54 / 17-34
PF01695.16 IstB-like ATP binding protein 0.0089 36-56 / 47-67
PF03796.14 DnaB-like helicase C terminal domain 0.0097 36-60 / 18-42
PF07724.13 AAA domain (Cdc48 subfamily) 0.0099 38-56 / 4-22

Annotations of the NCBI proteins of this PHROG


3:terminase large subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K06909 xtmB : phage terminase large subunit no pathways 244 10

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003676 nucleic acid binding
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated
GO:0015937 coenzyme A biosynthetic process
GO:0016740 transferase activity
GO:0006000 fructose metabolic process
GO:0000166 nucleotide binding
GO:0006270 DNA replication initiation
GO:0004140 dephospho-CoA kinase activity
GO:0016887 ATPase activity
GO:0006323 DNA packaging
GO:0009236 cobalamin biosynthetic process
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008134 transcription factor binding
GO:0005634 nucleus
GO:0000160 phosphorelay signal transduction system
GO:0006139 nucleobase-containing compound metabolic process
GO:0016020 membrane
GO:0003724 RNA helicase activity
GO:0017038 protein import
GO:0051188 cofactor biosynthetic process
GO:0006260 DNA replication
GO:0003678 DNA helicase activity
GO:0004127 cytidylate kinase activity
GO:0016787 hydrolase activity
GO:0009378 four-way junction helicase activity
GO:0003688 DNA replication origin binding
GO:0098519 nucleotide phosphatase activity, acting on free nucleotides
GO:0003873 6-phosphofructo-2-kinase activity
GO:0006695 cholesterol biosynthetic process
GO:0004161 dimethylallyltranstransferase activity
GO:0003972 RNA ligase (ATP) activity
GO:0000723 telomere maintenance
GO:0004673 protein histidine kinase activity
GO:0043752 adenosylcobinamide kinase activity
GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0003723 RNA binding
GO:0008152 metabolic process
GO:0016301 kinase activity
GO:0006281 DNA repair
GO:0005524 ATP binding
GO:0000155 phosphorelay sensor kinase activity
GO:0009058 biosynthetic process
GO:0004797 thymidine kinase activity
GO:0008026 ATP-dependent helicase activity
GO:0005525 GTP binding
GO:0004631 phosphomevalonate kinase activity

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