Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
73.67 | 80 | 72 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
NC_029094_p200 | YP_009225634.1 | hypothetical protein | NC_029094 | Pseudoalteromonas phage H101 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
KY883634_p17 | ASV41188.1 | hypothetical protein | KY883634 | Vibrio phage JSF5 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
KY883635_p18 | ASV41421.1 | hypothetical protein | KY883635 | Vibrio phage JSF6 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
NC_025436_p141 | YP_009100448.1 | hypothetical protein | NC_025436 | Shewanella sp. phage 1/4 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
HQ641353_p99 | ADX89281.1 | hypothetical protein | HQ641353 | Vibrio phage ICP1_2001_A | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
HQ641352_p103 | ADX89055.1 | hypothetical protein | HQ641352 | Vibrio phage ICP1_2005_A | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
NC_015157_p98 | YP_004251039.1 | hypothetical protein | NC_015157 | Vibrio phage ICP1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
HQ641354_p102 | ADX89514.1 | hypothetical protein | HQ641354 | Vibrio phage ICP1_2004_A | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
HQ641348_p98 | ADX88144.1 | hypothetical protein | HQ641348 | Vibrio phage ICP1_2006_D | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
NC_025470_p144 | YP_009104145.1 | hypothetical protein | NC_025470 | Shewanella sp. phage 1/40 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
KX507046_p129 | AOQ26854.1 | hypothetical protein | KX507046 | Vibrio phage S4-7 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
MF370964_p9 | ASU03296.1 | hypothetical protein | MF370964 | Pseudoalteromonas phage SL20 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_11248 | 9 | no annotation | unknown function | 9 | 0 | 1000 |
phrog_5934 | 21 | acyl carrier protein | moron, auxiliary metabolic gene and host takeover | 7 | 9.34E-33 | 23.15 |
phrog_4756 | 28 | no annotation | unknown function | 3 | 6.63E-15 | 5.3 |
phrog_29656 | 2 | no annotation | unknown function | 2 | 0 | 1000 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1373 | transcriptional regulator | transcription regulation | 96.3 | 5.7E-05 | 6-66 / 32-91 |
phrog_18318 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 95.9 | 0.00024 | 1-70 / 29-98 |
phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 96.9 | 5E-06 | 2-69 / 21-88 |
phrog_3 | transcriptional repressor | transcription regulation | 90.0 | 0.064 | 8-55 / 6-54 |
phrog_7126 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 94.6 | 0.0028 | 17-66 / 28-77 |
phrog_8522 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 94.0 | 0.0054 | 11-64 / 13-65 |
phrog_8 | transcriptional regulator | transcription regulation | 92.5 | 0.019 | 8-62 / 4-55 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF13744.5 | Helix-turn-helix domain | 4.7E-08 | 11-67 / 23-79 |
PF01381.21 | Helix-turn-helix | 4.9E-08 | 15-65 / 5-54 |
PF07022.12 | Bacteriophage CI repressor helix-turn-helix domain | 5.2E-08 | 17-70 / 9-61 |
PF05339.10 | Protein of unknown function (DUF739) | 8.9E-08 | 11-67 / 8-63 |
PF14590.5 | Domain of unknown function (DUF4447) | 1.1E-07 | 7-68 / 8-71 |
PF10078.8 | Uncharacterized protein conserved in bacteria (DUF2316) | 1.2E-07 | 6-68 / 10-77 |
PF13443.5 | Cro/C1-type HTH DNA-binding domain | 2.2E-07 | 15-69 / 6-62 |
PF12844.6 | Helix-turn-helix domain | 2.7E-07 | 15-69 / 8-61 |
PF08667.9 | BetR domain | 4.6E-07 | 7-69 / 6-71 |
PF13413.5 | Helix-turn-helix domain | 5E-07 | 14-63 / 4-58 |
PF04645.11 | Protein of unknown function, DUF603 | 7.5E-07 | 5-57 / 6-60 |
PF15943.4 | Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT | 1.4E-06 | 21-69 / 10-57 |
PF15731.4 | Antitoxin component of bacterial toxin-antitoxin system, MqsA | 1.7E-06 | 14-67 / 77-128 |
PF05269.10 | Bacteriophage CII protein | 2.4E-06 | 14-69 / 18-70 |
PF13560.5 | Helix-turn-helix domain | 3.2E-06 | 11-66 / 6-63 |
PF08965.9 | Domain of unknown function (DUF1870) | 3.6E-05 | 10-44 / 5-41 |
PF12116.7 | Stage III sporulation protein D | 5.5E-05 | 18-61 / 18-61 |
PF14549.5 | DNA-binding transcriptional regulator Cro | 6.8E-05 | 15-66 / 6-52 |
PF13693.5 | Winged helix-turn-helix DNA-binding | 7.8E-05 | 13-69 / 9-61 |
PF04814.12 | Hepatocyte nuclear factor 1 (HNF-1), N terminus | 0.00031 | 16-57 / 123-163 |
PF00356.20 | Bacterial regulatory proteins, lacI family | 0.00041 | 22-44 / 2-24 |
PF10654.8 | Protein of unknown function (DUF2481) | 0.0022 | 17-43 / 78-104 |
PF00157.16 | Pou domain - N-terminal to homeobox domain | 0.004 | 9-42 / 10-49 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0043565 | sequence-specific DNA binding |
GO:0003677 | DNA binding |
GO:0045892 | negative regulation of transcription, DNA-templated |
GO:0003700 | DNA binding transcription factor activity |
GO:0045893 | positive regulation of transcription, DNA-templated |
GO:0005634 | nucleus |
GO:0006355 | regulation of transcription, DNA-templated |