phrog_9366 is made of 11 protein sequences and is annotated as "transposase"
Functional category: integration and excision


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
112 148 109


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_031081_p58 YP_009288180.1 DNA recombination nuclease inhibitor gamma NC_031081 Escherichia phage Envy Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus.
NC_013600_p47 YP_003344982.1 gp47 NC_013600 Sodalis phage SO1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
NC_031113_p21 YP_009291438.1 hypothetical protein NC_031113 Escherichia phage Gluttony Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus.
NC_024783_p49 YP_009055327.1 hypothetical protein NC_024783 Escherichia phage EK99P-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
NC_012223_p52 YP_002720054.1 hypothetical protein NC_012223 Escherichia virus SSL2009a Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
NC_016566_p45 YP_004957481.1 hypothetical protein NC_016566 Shigella phage EP23 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
KX534341_p46 ANY30051.1 hypothetical protein KX534341 Escherichia phage Pride Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus.
NC_028901_p46 YP_009208132.1 hypothetical protein NC_028901 Escherichia phage slur05 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus.
NC_027383_p55 YP_009152296.1 putative transposase NC_027383 Escherichia phage YD-2008.s Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
NC_019419_p17 YP_006990403.1 hypothetical protein NC_019419 Escherichia virus JL1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
NC_019724_p45 YP_007112652.1 hypothetical protein NC_019724 Escherichia phage HK578 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3228 45 replicative helicase-primase DNA, RNA and nucleotide metabolism 11 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11376 no annotation unknown function 91.8 0.029 74-108 / 51-85
phrog_11423 no annotation unknown function 94.7 0.0024 76-106 / 17-47
phrog_11457 no annotation unknown function 93.3 0.011 75-102 / 17-44
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 93.4 0.0095 71-107 / 148-184
phrog_14025 no annotation unknown function 94.3 0.004 55-106 / 12-55
phrog_141 terminase small subunit head and packaging 93.0 0.013 81-104 / 9-32
phrog_151 transposase integration and excision 95.2 0.00098 68-106 / 9-48
phrog_1529 no annotation unknown function 94.7 0.0024 67-107 / 1-40
phrog_1729 no annotation unknown function 93.3 0.01 80-106 / 83-109
phrog_2308 no annotation unknown function 95.6 0.00045 70-106 / 5-41
phrog_2328 transcriptional repressor transcription regulation 92.0 0.026 75-105 / 22-52
phrog_2538 terminase small subunit head and packaging 91.0 0.043 76-105 / 14-43
phrog_268 no annotation unknown function 90.7 0.049 80-105 / 16-40
phrog_2727 no annotation unknown function 92.5 0.019 80-104 / 24-48
phrog_2967 transcriptional regulator transcription regulation 91.9 0.027 68-105 / 7-46
phrog_309 terminase small subunit head and packaging 93.4 0.0096 72-106 / 15-49
phrog_35 transcriptional repressor transcription regulation 92.7 0.016 79-104 / 11-36
phrog_36 transcriptional regulator transcription regulation 95.1 0.0012 71-103 / 94-127
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.9 0.00022 71-106 / 69-104
phrog_3910 transcriptional regulator transcription regulation 90.2 0.059 61-100 / 59-98
phrog_3 transcriptional repressor transcription regulation 95.3 0.0009 77-104 / 12-39
phrog_409 transcriptional regulator transcription regulation 94.5 0.0029 79-103 / 9-32
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 93.7 0.0074 77-104 / 16-43
phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 95.4 0.00076 72-105 / 83-116
phrog_4494 no annotation unknown function 91.7 0.03 68-105 / 5-41
phrog_4779 transcriptional regulator transcription regulation 91.9 0.027 77-106 / 10-39
phrog_4 transcriptional repressor transcription regulation 91.9 0.028 79-103 / 12-34
phrog_5229 no annotation unknown function 90.5 0.054 75-108 / 75-108
phrog_534 DNA binding protein DNA, RNA and nucleotide metabolism 91.2 0.039 64-104 / 12-48
phrog_5536 no annotation unknown function 94.2 0.0045 73-105 / 13-45
phrog_5751 terminase large subunit head and packaging 94.1 0.0048 76-104 / 13-41
phrog_575 Cox-like excisionase and repressor integration and excision 93.5 0.0087 83-106 / 15-38
phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 91.1 0.04 81-104 / 111-134
phrog_6223 transcriptional repressor transcription regulation 93.4 0.0097 78-104 / 14-40
phrog_645 Rnase E DNA, RNA and nucleotide metabolism 94.5 0.0031 64-102 / 18-56
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 95.5 0.00059 72-106 / 59-93
phrog_66 excisionase and transcriptional regulator integration and excision 95.9 0.00025 82-106 / 10-34
phrog_6831 transcriptional regulator transcription regulation 96.0 0.00017 67-101 / 1-35
phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.7 0.0023 64-103 / 19-59
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.7 0.048 61-104 / 24-67
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 93.6 0.0079 79-105 / 16-42
phrog_8446 HNH endonuclease DNA, RNA and nucleotide metabolism 91.7 0.03 78-105 / 14-41
phrog_8898 no annotation unknown function 93.0 0.014 71-107 / 4-40
phrog_8 transcriptional regulator transcription regulation 94.5 0.003 80-104 / 13-36
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 90.4 0.054 82-106 / 19-43

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07638.10 ECF sigma factor 2.5E-08 46-137 / 71-175
PF16264.4 SatD family (SatD) 3.5E-06 87-137 / 141-197
PF05331.10 Protein of unknown function (DUF742) 5.1E-06 95-139 / 37-81
PF03333.12 Adhesin biosynthesis transcription regulatory protein 3.1E-05 92-137 / 35-81
PF07374.10 Protein of unknown function (DUF1492) 8.2E-05 89-137 / 47-97
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.00015 104-137 / 6-39
PF08281.11 Sigma-70, region 4 0.00017 94-137 / 8-52
PF04545.15 Sigma-70, region 4 0.00023 96-136 / 4-49
PF06530.11 Phage antitermination protein Q 0.00024 98-137 / 65-105
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.00025 90-136 / 11-58
PF16509.4 TrfB plasmid transcriptional repressor 0.00031 93-136 / 12-56
PF12759.6 InsA C-terminal domain 0.0004 104-135 / 14-45
PF07750.10 GcrA cell cycle regulator 0.00043 103-136 / 10-44
PF11242.7 Protein of unknown function (DUF2774) 0.00053 102-137 / 5-40
PF05263.10 Protein of unknown function (DUF722) 0.00066 88-137 / 73-130
PF05344.10 Domain of Unknown Function (DUF746) 0.00082 109-137 / 10-38
PF02001.15 Protein of unknown function DUF134 0.00085 92-136 / 27-72
PF06322.10 Phage NinH protein 0.00086 109-137 / 14-42
PF08822.10 Protein of unknown function (DUF1804) 0.00087 104-137 / 11-45
PF01371.18 Trp repressor protein 0.00093 104-137 / 41-74
PF07141.10 Putative bacteriophage terminase small subunit 0.001 104-136 / 24-56
PF13412.5 Winged helix-turn-helix DNA-binding 0.001 110-138 / 16-44
PF00292.17 'Paired box' domain 0.0012 104-136 / 26-58
PF14493.5 Helix-turn-helix domain 0.0012 106-137 / 7-38
PF04552.12 Sigma-54, DNA binding domain 0.0014 93-136 / 27-73
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0014 110-137 / 18-45
PF05225.15 helix-turn-helix, Psq domain 0.0016 109-137 / 14-43
PF01418.16 Helix-turn-helix domain, rpiR family 0.0017 96-137 / 13-60
PF00196.18 Bacterial regulatory proteins, luxR family 0.0018 99-137 / 5-43
PF11427.7 Tc3 transposase 0.0019 109-138 / 18-47
PF04936.11 Protein of unknown function (DUF658) 0.002 111-136 / 14-39
PF01710.15 Transposase 0.002 103-136 / 10-43
PF13011.5 leucine-zipper of insertion element IS481 0.0023 104-137 / 16-50
PF09607.9 Brinker DNA-binding domain 0.0024 112-136 / 26-50
PF10654.8 Protein of unknown function (DUF2481) 0.0028 109-135 / 78-104
PF02796.14 Helix-turn-helix domain of resolvase 0.0033 109-134 / 19-44
PF13936.5 Helix-turn-helix domain 0.0034 109-134 / 18-43
PF13518.5 Helix-turn-helix domain 0.0034 110-137 / 10-37
PF08535.9 KorB domain 0.0036 110-136 / 2-28
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0038 111-136 / 23-48
PF13404.5 AsnC-type helix-turn-helix domain 0.0038 110-135 / 16-41
PF10668.8 Phage terminase small subunit 0.0039 111-137 / 22-48
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0038 109-135 / 25-50
PF08765.10 Mor transcription activator family 0.0051 109-137 / 70-98
PF04967.11 HTH DNA binding domain 0.0053 112-136 / 24-48
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0058 109-137 / 10-38
PF10975.7 Protein of unknown function (DUF2802) 0.0059 99-132 / 31-64
PF17443.1 Uncharacterized protein pXO2-72 0.0061 110-132 / 7-29
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0065 110-137 / 22-49
PF06627.10 Protein of unknown function (DUF1153) 0.0073 103-137 / 37-72
PF02954.18 Bacterial regulatory protein, Fis family 0.0072 110-134 / 15-39
PF04492.12 Bacteriophage replication protein O 0.0076 111-138 / 49-76
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0083 110-137 / 10-37

Annotations of the NCBI proteins of this PHROG


8:hypothetical protein 2:transposase 1:DNA recombination nuclease inhibitor gamma

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006355 regulation of transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation
GO:0006260 DNA replication
GO:0005622 intracellular
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0005667 transcription factor complex
GO:0019069 viral capsid assembly
GO:0016987 sigma factor activity
GO:0000150 recombinase activity
GO:0005524 ATP binding
GO:0003700 DNA binding transcription factor activity
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0043565 sequence-specific DNA binding

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