Genomic map of Enterobacteria phage f1 (AB334721)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AB334721
Definition
Enterobacteria phage f1 DNA, complete genome, isolate: NBRC 20015.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus; Escherichia virus M13.
DB of origin
PVOG
Length
6407
Host Name
Enterobacteriaceae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
10
%GC
40.84
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BAF74218.1 AB334721_p7 protein III phrog_8482 attachment protein head and packaging 1 1579 2853
BAF74222.1 AB334721_p1 protein II phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 1 831
BAF74222.1 AB334721_p1 protein II phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 6006 6407
BAF74213.1 AB334721_p2 protein X phrog_8855 replication protein DNA, RNA and nucleotide metabolism 1 496 831
BAF74221.1 AB334721_p10 protein IV phrog_1012 assembly (protein IV of M13) head and packaging 1 4220 5500
BAF74216.1 AB334721_p5 protein IX phrog_10143 minor coat protein head and packaging 1 1206 1304
BAF74217.1 AB334721_p6 protein VIII phrog_1646 major coat protein head and packaging 1 1301 1522
BAF74219.1 AB334721_p8 protein VI phrog_1944 minor head protein head and packaging 1 2856 3194
BAF74215.1 AB334721_p4 protein VII phrog_7781 minor coat protein head and packaging 1 1108 1209
BAF74214.1 AB334721_p3 protein V phrog_1199 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 843 1106
BAF74220.1 AB334721_p9 protein I phrog_1675 morphogenesis (protein I of M13) head and packaging 1 3196 4242