Genomic map of Staphylococcus phage S13' (AB626963)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AB626963
Definition
Staphylococcus phage S13' DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
DB of origin
PVOG
Length
18186
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
21
%GC
29.21
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BAL42314.1 AB626963_p6 hypothetical protein phrog_7529 unknown function unknown function 1 1728 2132
BAL42312.1 AB626963_p4 single stranded DNA binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1132 1500
BAL42320.1 AB626963_p12 holin phrog_199 holin lysis -1 7904 8326
BAL42311.1 AB626963_p3 hypothetical protein phrog_6346 unknown function unknown function 1 872 1108
BAL42316.1 AB626963_p8 hypothetical protein phrog_6099 unknown function unknown function 1 2298 2780
BAL42309.1 AB626963_p1 hypothetical protein singleton unknown function unknown function 1 437 559
BAL42329.1 AB626963_p21 hypothetical protein phrog_7102 unknown function unknown function -1 17535 17897
BAL42318.1 AB626963_p10 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4090 6375
BAL42317.1 AB626963_p9 hypothetical protein phrog_2150 terminase head and packaging 1 2828 4075
BAL42313.1 AB626963_p5 hypothetical protein phrog_7019 unknown function unknown function 1 1550 1726
BAL42324.1 AB626963_p16 minor structure protein phrog_287 minor tail protein tail -1 12425 14362
BAL42323.1 AB626963_p15 endolysin phrog_635 endolysin lysis -1 11657 12418
BAL42325.1 AB626963_p17 lower collar protein phrog_3225 adaptor Ad4 connector -1 14375 15130
BAL42310.1 AB626963_p2 hypothetical protein phrog_6274 unknown function unknown function 1 552 854
BAL42319.1 AB626963_p11 tail lysin phrog_5979 unknown function unknown function -1 6490 7929
BAL42327.1 AB626963_p19 major capsid protein phrog_2006 major head protein head and packaging -1 16121 17332
BAL42328.1 AB626963_p20 hypothetical protein phrog_6289 unknown function unknown function -1 17339 17521
BAL42322.1 AB626963_p14 minor tail protein phrog_9604 tail protein tail -1 10149 11594
BAL42321.1 AB626963_p13 major tail protein phrog_2248 tail protein tail -1 8329 10092
BAL42315.1 AB626963_p7 hypothetical protein phrog_8543 unknown function unknown function 1 2125 2295
BAL42326.1 AB626963_p18 upper collar protein phrog_2038 upper collar connector connector -1 15123 16106