Genomic map of Staphylococcus virus 44AHJD (44AHJD) (AF513032)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AF513032
Definition
Staphylococcus phage phi44AHJD, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus.
DB of origin
NUCCORE
Length
16784
Host Name
Staphylococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
21
%GC
29.62
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AAO83874.1 AF513032_p21 unknown phrog_7102 unknown function unknown function -1 16100 16501
AAO83867.1 AF513032_p14 holin phrog_20374 holin lysis -1 10179 10457
AAO83865.1 AF513032_p12 holin phrog_199 holin lysis -1 7887 8309
AAO83857.1 AF513032_p4 single stranded DNA binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1107 1475
AAO83871.1 AF513032_p18 upper collar protein phrog_2038 upper collar connector connector -1 13673 14422
AAO83860.1 AF513032_p7 unknown phrog_8543 unknown function unknown function 1 2107 2274
AAO83870.1 AF513032_p17 lower collar protein phrog_3225 adaptor Ad4 connector -1 12925 13680
AAO83858.1 AF513032_p5 unknown phrog_7019 unknown function unknown function 1 1525 1701
AAO83866.1 AF513032_p13 tail protein phrog_2248 tail protein tail -1 8311 10074
AAO83861.1 AF513032_p8 unknown phrog_6099 unknown function unknown function 1 2280 2762
AAO83854.1 AF513032_p1 unknown phrog_10178 unknown function unknown function 1 338 535
AAO83863.1 AF513032_p10 DNA-polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4091 6358
AAO83869.1 AF513032_p16 minor structural protein phrog_287 minor tail protein tail -1 10968 12911
AAO83872.1 AF513032_p19 major head protein phrog_2006 major head protein head and packaging -1 14671 15897
AAO83873.1 AF513032_p20 unknown phrog_6289 unknown function unknown function -1 15904 16086
AAO83864.1 AF513032_p11 unknown phrog_5979 unknown function unknown function -1 6473 7912
AAO83855.1 AF513032_p2 unknown phrog_6274 unknown function unknown function 1 528 830
AAO83859.1 AF513032_p6 unknown phrog_7529 unknown function unknown function 1 1704 2114
AAO83862.1 AF513032_p9 encapsidation protein phrog_2150 terminase head and packaging 1 2921 4057
AAO83856.1 AF513032_p3 unknown phrog_6346 unknown function unknown function 1 848 1084
AAO83868.1 AF513032_p15 amidase phrog_635 endolysin lysis -1 10204 10956