Genomic map of Stx2 converting phage I (AP004402)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AP004402
Definition
Stx2 converting phage I DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; Escherichia virus 933W.
DB of origin
PVOG
Length
61765
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
166
%GC
49.38
Number of singletons
7
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BAB87953.1 AP004402_p106 hypothetical protein phrog_18788 unknown function unknown function 1 38601 39077
BAB88000.1 AP004402_p153 hypothetical protein phrog_494 unknown function unknown function 1 57006 57185
BAB87979.1 AP004402_p132 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 48026 48571
BAB87905.1 AP004402_p57 hypothetical protein phrog_22954 unknown function unknown function -1 21484 21786
BAB87887.1 AP004402_p39 hypothetical protein phrog_24458 unknown function unknown function -1 15443 15688
BAB87957.1 AP004402_p110 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 39416 39685
BAB87875.1 AP004402_p27 hypothetical protein phrog_19959 unknown function unknown function 1 9365 9610
BAB87884.1 AP004402_p36 hypothetical protein phrog_22484 unknown function unknown function -1 13991 14257
BAB88013.1 AP004402_p166 hypothetical protein phrog_22365 unknown function unknown function -1 61054 61320
BAB87986.1 AP004402_p139 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 50472 51200
BAB87860.1 AP004402_p12 hypothetical protein phrog_22380 unknown function unknown function 1 5951 6211
BAB87921.1 AP004402_p74 hypothetical protein phrog_60 unknown function unknown function -1 29386 30285
BAB87872.1 AP004402_p24 hypothetical protein phrog_23612 unknown function unknown function -1 8984 9673
BAB87888.1 AP004402_p40 hypothetical protein phrog_610 unknown function unknown function 1 15942 16343
BAB87894.1 AP004402_p46 hypothetical protein phrog_594 unknown function unknown function 1 17552 17803
BAB87917.1 AP004402_p70 hypothetical protein phrog_1230 unknown function unknown function -1 28081 28425
BAB87949.1 AP004402_p102 hypothetical protein phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 37579 38256
BAB87879.1 AP004402_p31 hypothetical protein phrog_24576 unknown function unknown function -1 10821 11216
BAB87907.1 AP004402_p59 hypothetical protein phrog_19234 unknown function unknown function -1 22153 22476
BAB87999.1 AP004402_p152 hypothetical protein phrog_9558 unknown function unknown function 1 56868 56993
BAB87939.1 AP004402_p92 hypothetical protein phrog_926 unknown function unknown function -1 35294 35581
BAB87965.1 AP004402_p118 hypothetical protein singleton unknown function unknown function 1 43125 43370
BAB87914.1 AP004402_p66 hypothetical protein phrog_23367 unknown function unknown function 1 26011 26319
BAB87936.1 AP004402_p89 hypothetical protein phrog_2821 unknown function unknown function -1 34785 35072
BAB87857.1 AP004402_p9 hypothetical protein phrog_17229 unknown function unknown function -1 4978 5262
BAB87897.1 AP004402_p49 hypothetical protein phrog_27633 unknown function unknown function -1 18296 18544
BAB87850.1 AP004402_p2 hypothetical protein phrog_156 portal protein head and packaging 1 1255 3399
BAB87928.1 AP004402_p81 hypothetical protein phrog_24266 unknown function unknown function 1 31598 31873
BAB87915.1 AP004402_p68 hypothetical protein phrog_23872 unknown function unknown function -1 27021 27272
BAB87942.1 AP004402_p95 hypothetical protein phrog_13760 unknown function unknown function 1 36077 36427
BAB87937.1 AP004402_p90 hypothetical protein phrog_1832 released from the phage upon host infection other -1 35074 35292
BAB87980.1 AP004402_p133 hypothetical protein phrog_111 DNA methyltransferase other 1 48568 49095
BAB87895.1 AP004402_p47 hypothetical protein phrog_22217 unknown function unknown function -1 17600 17854
BAB87861.1 AP004402_p13 hypothetical protein phrog_19479 unknown function unknown function -1 6182 6454
BAB87946.1 AP004402_p99 hypothetical protein phrog_292 unknown function unknown function -1 37233 37424
BAB87910.1 AP004402_p62 hypothetical protein phrog_21936 unknown function unknown function -1 24580 25005
BAB87919.1 AP004402_p72 hypothetical protein phrog_19126 unknown function unknown function 1 28745 29494
BAB87996.1 AP004402_p149 hypothetical protein phrog_25016 unknown function unknown function -1 55188 55532
BAB87951.1 AP004402_p104 hypothetical protein phrog_22877 unknown function unknown function 1 38182 38475
BAB87904.1 AP004402_p56 hypothetical protein phrog_26348 unknown function unknown function 1 21436 21969
BAC67677.1 AP004402_p67 hypothetical protein phrog_23924 unknown function unknown function -1 26448 26711
BAB87941.1 AP004402_p94 hypothetical protein phrog_250 unknown function unknown function -1 35851 36624
BAB87993.1 AP004402_p146 Shiga toxin2 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 53207 54166
BAB87968.1 AP004402_p121 CI protein phrog_4 transcriptional repressor transcription regulation -1 43821 44528
BAB87967.1 AP004402_p120 hypothetical protein singleton unknown function unknown function 1 43680 44087
BAB87970.1 AP004402_p123 CII protein phrog_191 CII-like transcriptional activator transcription regulation 1 44973 45269
BAB87973.1 AP004402_p126 hypothetical protein singleton unknown function unknown function -1 46149 46475
BAB87886.1 AP004402_p38 hypothetical protein phrog_108 Lom outer membrane protein other 1 14778 15512
BAB88008.1 AP004402_p161 hypothetical protein phrog_17757 unknown function unknown function -1 59542 59820
BAB87959.1 AP004402_p112 Ea10 protein phrog_646 unknown function unknown function -1 39765 40133
BAB88010.1 AP004402_p163 Bor protein precursor phrog_260 Bor-like outer membrane protein other -1 59825 60118
BAB87909.1 AP004402_p61 hypothetical protein phrog_25248 unknown function unknown function 1 23203 23460
BAB87899.1 AP004402_p51 hypothetical protein phrog_27622 unknown function unknown function -1 19676 19924
BAB87852.1 AP004402_p4 hypothetical protein phrog_23519 unknown function unknown function -1 2993 3253
BAB87854.1 AP004402_p6 hypothetical protein phrog_479 unknown function unknown function 1 3557 4564
BAB88001.1 AP004402_p154 hypothetical protein phrog_8301 unknown function unknown function 1 57052 57498
BAB87876.1 AP004402_p28 hypothetical protein phrog_576 tail fiber protein tail 1 9869 10258
BAB87985.1 AP004402_p138 hypothetical protein phrog_22161 unknown function unknown function 1 50310 50465
BAB88009.1 AP004402_p162 Rz1 protein precursor phrog_3198 Rz-like spanin lysis 1 59549 59734
BAB87963.1 AP004402_p116 hypothetical protein phrog_2361 serine-threonine kinase other -1 41850 42896
BAB87916.1 AP004402_p69 hypothetical protein phrog_1925 unknown function unknown function 1 27813 28001
BAB87900.1 AP004402_p52 hypothetical protein phrog_22242 unknown function unknown function 1 20242 20556
BAB87971.1 AP004402_p124 O protein phrog_277 replication initiation O-like DNA, RNA and nucleotide metabolism 1 45302 46240
BAB87931.1 AP004402_p84 hypothetical protein phrog_3680 unknown function unknown function -1 33510 33821
BAB87960.1 AP004402_p113 hypothetical protein phrog_1636 unknown function unknown function -1 40282 40752
BAB87891.1 AP004402_p43 hypothetical protein phrog_22701 unknown function unknown function 1 16807 17163
BAB87995.1 AP004402_p148 hypothetical protein phrog_143 unknown function unknown function 1 54934 56871
BAB87903.1 AP004402_p55 hypothetical protein phrog_24815 unknown function unknown function 1 21091 21351
BAB87896.1 AP004402_p48 hypothetical protein phrog_601 unknown function unknown function 1 17814 19079
BAB87944.1 AP004402_p97 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 36621 36842
BAB87977.1 AP004402_p130 hypothetical protein phrog_1785 unknown function unknown function 1 47706 47921
BAB88002.1 AP004402_p155 lysis protein phrog_20 holin lysis 1 57575 57790
BAB88006.1 AP004402_p159 Ant protein phrog_524 anti-repressor Ant transcription regulation 1 58603 59172
BAB87878.1 AP004402_p30 hypothetical protein phrog_511 internal virion protein head and packaging 1 10803 12506
BAB87925.1 AP004402_p78 hypothetical protein phrog_22640 unknown function unknown function 1 30490 30738
BAB88007.1 AP004402_p160 endopeptidase phrog_13 Rz-like spanin lysis 1 59329 59793
BAB87864.1 AP004402_p16 hypothetical protein phrog_18985 unknown function unknown function 1 7057 7353
BAB87890.1 AP004402_p42 hypothetical protein phrog_611 unknown function unknown function 1 16437 17093
BAB87975.1 AP004402_p128 hypothetical protein phrog_142 Ren-like exclusion protein moron, auxiliary metabolic gene and host takeover 1 46935 47225
BAB87947.1 AP004402_p100 hypothetical protein phrog_18463 unknown function unknown function 1 37376 37702
BAB87952.1 AP004402_p105 Bet protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 38253 39038
BAB87892.1 AP004402_p44 hypothetical protein phrog_25638 unknown function unknown function -1 17094 17600
BAB87938.1 AP004402_p91 hypothetical protein phrog_20982 unknown function unknown function 1 35111 35407
BAB87974.1 AP004402_p127 P protein phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 46237 46938
BAB87923.1 AP004402_p76 hypothetical protein phrog_13760 unknown function unknown function 1 29834 30088
BAB88011.1 AP004402_p164 hypothetical protein phrog_6954 Rz-like spanin lysis 1 60226 60471
BAB87873.1 AP004402_p25 hypothetical protein phrog_26766 unknown function unknown function -1 9210 9503
BAB87920.1 AP004402_p73 hypothetical protein phrog_1621 unknown function unknown function -1 28991 29461
BAB87930.1 AP004402_p83 hypothetical protein phrog_539 excisionase integration and excision -1 33140 33439
BAB87902.1 AP004402_p54 hypothetical protein phrog_25094 unknown function unknown function -1 20337 20627
BAB87950.1 AP004402_p103 hypothetical protein phrog_23778 unknown function unknown function 1 38159 38425
BAB87994.1 AP004402_p147 Shiga toxin2 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 54178 54447
BAB87935.1 AP004402_p88 hypothetical protein phrog_23824 unknown function unknown function 1 34444 34692
BAB87958.1 AP004402_p111 CIII protein phrog_550 CIII anti-termination transcription regulation -1 39528 39692
BAB87869.1 AP004402_p21 hypothetical protein phrog_2481 unknown function unknown function 1 8321 8815
BAB87893.1 AP004402_p45 hypothetical protein phrog_596 unknown function unknown function 1 17096 17542
BAB87874.1 AP004402_p26 hypothetical protein phrog_18077 unknown function unknown function -1 9295 10149
BAB87964.1 AP004402_p117 hypothetical protein phrog_3875 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 42890 43351
BAB88014.1 AP004402_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 61314 61765
BAB88014.1 AP004402_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 1 1255
BAB87881.1 AP004402_p33 hypothetical protein phrog_496 tail fiber protein tail 1 12503 13771
BAB87978.1 AP004402_p131 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 47743 48168
BAB87943.1 AP004402_p96 hypothetical protein phrog_27631 unknown function unknown function -1 36111 36368
BAB87918.1 AP004402_p71 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover -1 28545 28757
BAB87885.1 AP004402_p37 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 14070 14687
BAB87877.1 AP004402_p29 hypothetical protein phrog_2014 unknown function unknown function 1 10305 10586
BAB87966.1 AP004402_p119 hypothetical protein phrog_3467 unknown function unknown function -1 43419 43760
BAB87906.1 AP004402_p58 hypothetical protein phrog_23991 unknown function unknown function -1 21702 22124
BAB87954.1 AP004402_p107 hypothetical protein phrog_22813 unknown function unknown function 1 38905 39156
BAB87982.1 AP004402_p135 hypothetical protein singleton unknown function unknown function 1 49092 49193
BAB87976.1 AP004402_p129 hypothetical protein phrog_343 unknown function unknown function 1 47296 47574
BAB87934.1 AP004402_p87 hypothetical protein phrog_60 unknown function unknown function -1 34158 34781
BAB87883.1 AP004402_p35 hypothetical protein phrog_557 outer membrane protein other 1 13837 14064
BAB87962.1 AP004402_p115 hypothetical protein phrog_4063 unknown function unknown function -1 41683 41847
BAB87989.1 AP004402_p142 hypothetical protein phrog_268 unknown function unknown function 1 51832 51996
BAB87913.1 AP004402_p65 hypothetical protein phrog_23348 unknown function unknown function -1 25712 26101
BAB87898.1 AP004402_p50 hypothetical protein phrog_616 unknown function unknown function 1 19110 27530
BAB87991.1 AP004402_p144 hypothetical protein phrog_35146 unknown function unknown function -1 52230 52529
BAB87945.1 AP004402_p98 hypothetical protein phrog_303 unknown function unknown function -1 36941 37222
BAB87983.1 AP004402_p136 hypothetical protein singleton unknown function unknown function -1 49252 49527
BAB87981.1 AP004402_p134 hypothetical protein singleton unknown function unknown function -1 48702 49016
BAB87855.1 AP004402_p7 hypothetical protein phrog_24828 unknown function unknown function -1 4084 4440
BAB87853.1 AP004402_p5 hypothetical protein phrog_18958 unknown function unknown function -1 3551 3940
BAB87901.1 AP004402_p53 hypothetical protein phrog_23740 unknown function unknown function -1 20263 20616
BAB87987.1 AP004402_p140 hypothetical protein phrog_28914 unknown function unknown function -1 50610 50990
BAB87912.1 AP004402_p64 hypothetical protein phrog_21686 unknown function unknown function -1 25356 25727
BAB88012.1 AP004402_p165 hypothetical protein phrog_370 terminase small subunit head and packaging 1 60527 61333
BAB87932.1 AP004402_p85 hypothetical protein phrog_20945 unknown function unknown function 1 33869 34171
BAB87922.1 AP004402_p75 hypothetical protein phrog_23547 unknown function unknown function 1 29479 29847
BAB87948.1 AP004402_p101 hypothetical protein phrog_1998 unknown function unknown function -1 37397 37585
BAB87911.1 AP004402_p63 hypothetical protein phrog_25517 unknown function unknown function -1 24672 24953
BAB87940.1 AP004402_p93 hypothetical protein phrog_12350 unknown function unknown function -1 35511 35978
BAB87998.1 AP004402_p151 hypothetical protein phrog_29139 unknown function unknown function 1 56061 56321
BAB87865.1 AP004402_p17 hypothetical protein phrog_399 structural protein head and packaging 1 7304 7954
BAB88004.1 AP004402_p157 endolysin phrog_7 endolysin lysis 1 57795 58328
BAB87858.1 AP004402_p10 hypothetical protein phrog_25694 unknown function unknown function 1 5129 5392
BAB87972.1 AP004402_p125 hypothetical protein singleton unknown function unknown function -1 45889 46212
BAB87856.1 AP004402_p8 hypothetical protein phrog_334 major head protein head and packaging 1 4588 5544
BAB87871.1 AP004402_p23 hypothetical protein phrog_7242 unknown function unknown function 1 8951 9298
BAB87882.1 AP004402_p34 hypothetical protein phrog_22407 unknown function unknown function -1 12979 13314
BAB87988.1 AP004402_p141 hypothetical protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 51200 51805
BAB87933.1 AP004402_p86 hypothetical protein phrog_625 unknown function unknown function -1 33881 34246
BAB87866.1 AP004402_p18 hypothetical protein phrog_22314 unknown function unknown function -1 7556 7861
BAB87927.1 AP004402_p80 hypothetical protein phrog_22003 unknown function unknown function 1 30749 31105
BAB87955.1 AP004402_p108 hypothetical protein phrog_27890 unknown function unknown function -1 38998 39270
BAB87984.1 AP004402_p137 hypothetical protein phrog_2384 unknown function unknown function 1 49277 50326
BAB87929.1 AP004402_p82 hypothetical protein phrog_1 integrase integration and excision -1 31777 33111
BAB87908.1 AP004402_p60 hypothetical protein phrog_23644 unknown function unknown function 1 22282 22563
BAB87880.1 AP004402_p32 hypothetical protein phrog_26911 unknown function unknown function -1 11188 11448
BAB87862.1 AP004402_p14 hypothetical protein phrog_482 unknown function unknown function 1 6269 6757
BAB87961.1 AP004402_p114 N protein phrog_271 anti-termination protein N-like transcription regulation -1 40811 41194
BAB87868.1 AP004402_p20 hypothetical protein phrog_366 tail fiber protein tail 1 7951 9987
BAB87867.1 AP004402_p19 hypothetical protein phrog_23554 unknown function unknown function 1 7743 7988
BAB88003.1 AP004402_p156 hypothetical protein phrog_25169 unknown function unknown function -1 57676 57918
BAB87889.1 AP004402_p41 hypothetical protein phrog_23423 unknown function unknown function -1 16184 16435
BAB87956.1 AP004402_p109 Gam protein phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 39044 39340
BAB87990.1 AP004402_p143 Q protein phrog_79 anti-termination protein Q-like transcription regulation 1 51950 52423
BAB87859.1 AP004402_p11 hypothetical protein phrog_486 virion structural protein head and packaging 1 5857 6246
BAB87969.1 AP004402_p122 Cro protein phrog_35 transcriptional repressor transcription regulation 1 44607 44834
BAB88005.1 AP004402_p158 hypothetical protein phrog_22558 unknown function unknown function -1 57812 58072
BAB87926.1 AP004402_p79 hypothetical protein phrog_377 anti-repressor Ant transcription regulation -1 30551 31180
BAB87997.1 AP004402_p150 hypothetical protein phrog_25251 unknown function unknown function -1 55564 55905
BAB87924.1 AP004402_p77 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 30282 30503
BAB87851.1 AP004402_p3 hypothetical protein phrog_22625 unknown function unknown function 1 2483 2749
BAB87870.1 AP004402_p22 hypothetical protein phrog_23477 unknown function unknown function -1 8346 8636
BAB87992.1 AP004402_p145 hypothetical protein phrog_17306 unknown function unknown function -1 52412 52657
BAB87863.1 AP004402_p15 hypothetical protein phrog_437 virion structural protein head and packaging 1 6633 7304