Genomic map of Mycobacterium phage Y10 (AP018469)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AP018469
Definition
Mycobacterium phage Y10 DNA, complete genome, note: sample1.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; Mycobacterium virus Fionnbarth.
DB of origin
NUCCORE
Length
57990
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
67.88
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BBC43323.1 AP018469_p35 hypothetical protein singleton unknown function unknown function 1 29257 29445
BBC43349.1 AP018469_p61 exonuclease phrog_1498 unknown function unknown function 1 40915 41079
BBC43372.1 AP018469_p84 hypothetical protein phrog_12916 unknown function unknown function 1 53744 53899
BBC43321.1 AP018469_p33 holin phrog_565 holin lysis 1 28458 28856
BBC43362.1 AP018469_p74 hypothetical protein phrog_12358 unknown function unknown function 1 49056 49748
BBC43331.1 AP018469_p43 hypothetical protein phrog_806 unknown function unknown function -1 32835 33356
BBC43365.1 AP018469_p77 hypothetical protein phrog_2493 unknown function unknown function 1 50851 51354
BBC43319.1 AP018469_p31 putitive lysin A phrog_317 endolysin lysis 1 26019 27629
BBC43358.1 AP018469_p70 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44849 45229
BBC43374.1 AP018469_p86 hypothetical protein phrog_5436 unknown function unknown function 1 54343 55134
BBC43328.1 AP018469_p40 hypothetical protein phrog_7217 unknown function unknown function 1 31709 32011
BBC43317.1 AP018469_p29 putitive minor tail protein phrog_416 minor tail protein tail 1 24585 25589
BBC43318.1 AP018469_p30 hypothetical protein phrog_240 head protein head and packaging 1 25611 25988
BBC43379.1 AP018469_p91 methyltransferase phrog_2675 DNA methyltransferase other 1 57383 57958
BBC43345.1 AP018469_p57 hypothetical protein phrog_14062 unknown function unknown function 1 39444 39653
BBC43320.1 AP018469_p32 putitive lysin B phrog_102 endolysin lysis 1 27629 28420
BBC43310.1 AP018469_p22 tape measure protein phrog_971 endolysin lysis 1 13313 17488
BBC43290.1 AP018469_p2 hypothetical protein phrog_2074 unknown function unknown function 1 251 481
BBC43289.1 AP018469_p1 hypothetical protein phrog_5391 unknown function unknown function 1 117 254
BBC43343.1 AP018469_p55 hypothetical protein phrog_2286 unknown function unknown function 1 38363 39055
BBC43295.1 AP018469_p7 hypothetical protein phrog_2622 unknown function unknown function 1 1985 2224
BBC43302.1 AP018469_p14 major capsid protein phrog_10 major head protein head and packaging 1 9164 10093
BBC43334.1 AP018469_p46 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35747 36100
BBC43325.1 AP018469_p37 hypothetical protein phrog_1042 unknown function unknown function 1 30625 30906
BBC43326.1 AP018469_p38 HTH DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31056 31379
BBC43368.1 AP018469_p80 hypothetical protein phrog_16540 unknown function unknown function 1 52510 52887
BBC43377.1 AP018469_p89 hypothetical protein phrog_14339 unknown function unknown function 1 56862 57074
BBC43314.1 AP018469_p26 putitive minor tail protein phrog_1565 minor tail protein tail 1 20925 22022
BBC43336.1 AP018469_p48 puative excise protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36482 36667
BBC43371.1 AP018469_p83 hypothetical protein phrog_3963 unknown function unknown function 1 53421 53729
BBC43378.1 AP018469_p90 putaive HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57078 57383
BBC43354.1 AP018469_p66 hypothetical protein phrog_1911 unknown function unknown function 1 42759 43424
BBC43360.1 AP018469_p72 hypothetical protein phrog_10480 unknown function unknown function 1 48167 48571
BBC43357.1 AP018469_p69 hypothetical protein phrog_12554 unknown function unknown function 1 44689 44859
BBC43308.1 AP018469_p20 putitive tail assembly chaperone phrog_1861 unknown function unknown function 1 12430 12879
BBC43359.1 AP018469_p71 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45321 47942
BBC43338.1 AP018469_p50 hypothetical protein phrog_2654 unknown function unknown function 1 36976 37158
BBC43305.1 AP018469_p17 head-to-tail connector protein phrog_387 neck protein connector 1 10953 11213
BBC43300.1 AP018469_p12 hypothetical protein phrog_1757 unknown function unknown function 1 8245 8442
BBC43346.1 AP018469_p58 type II toxin-antitoxin system HicA family toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 39650 39871
BBC43375.1 AP018469_p87 hypothetical protein phrog_2433 unknown function unknown function 1 55199 55906
BBC43307.1 AP018469_p19 major tail protein phrog_117 major tail protein tail 1 11716 12327
BBC43356.1 AP018469_p68 DNA methylase phrog_67 DNA methyltransferase other 1 43844 44689
BBC43322.1 AP018469_p34 hypothetical protein phrog_3413 unknown function unknown function 1 28853 29188
BBC43301.1 AP018469_p13 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 8533 9105
BBC43350.1 AP018469_p62 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41076 41939
BBC43298.1 AP018469_p10 portal protein phrog_104 portal protein head and packaging 1 3922 5508
BBC43370.1 AP018469_p82 hypothetical protein phrog_7647 unknown function unknown function 1 53159 53392
BBC43312.1 AP018469_p24 putitive minor tail protein phrog_110 minor tail protein tail 1 18637 20409
BBC43306.1 AP018469_p18 head-to-tail connector protein phrog_123 tail terminator connector 1 11210 11635
BBC43304.1 AP018469_p16 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 10610 10966
BBC43296.1 AP018469_p8 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 2221 2493
BBC43291.1 AP018469_p3 hypothetical protein phrog_542 unknown function unknown function 1 478 645
BBC43341.1 AP018469_p53 hypothetical protein phrog_658 unknown function unknown function 1 37767 38120
BBC43332.1 AP018469_p44 integrase phrog_1 integrase integration and excision 1 33595 34860
BBC43348.1 AP018469_p60 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40319 40915
BBC43299.1 AP018469_p11 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 5489 8248
BBC43364.1 AP018469_p76 hypothetical protein phrog_12502 unknown function unknown function 1 50651 50854
BBC43297.1 AP018469_p9 terminase phrog_2 terminase large subunit head and packaging 1 2570 3910
BBC43355.1 AP018469_p67 puative glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43533 43847
BBC43337.1 AP018469_p49 hypothetical protein phrog_14099 unknown function unknown function 1 36672 36932
BBC43376.1 AP018469_p88 hypothetical protein phrog_4095 unknown function unknown function 1 55993 56691
BBC43339.1 AP018469_p51 hypothetical protein phrog_11977 unknown function unknown function 1 37155 37466
BBC43352.1 AP018469_p64 hypothetical protein phrog_1581 unknown function unknown function 1 42079 42297
BBC43327.1 AP018469_p39 hypothetical protein phrog_1338 unknown function unknown function 1 31413 31712
BBC43353.1 AP018469_p65 hypothetical protein phrog_12856 unknown function unknown function 1 42288 42575
BBC43313.1 AP018469_p25 putitive minor tail protein phrog_1697 minor tail protein tail 1 20410 20928
BBC43347.1 AP018469_p59 hypothetical protein phrog_1956 unknown function unknown function 1 39964 40239
BBC43366.1 AP018469_p78 protease phrog_1006 unknown function unknown function 1 51399 51974
BBC43303.1 AP018469_p15 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 10242 10607
BBC43292.1 AP018469_p4 hypothetical protein phrog_5972 unknown function unknown function 1 645 914
BBC43340.1 AP018469_p52 hypothetical protein phrog_12473 endonuclease DNA, RNA and nucleotide metabolism 1 37469 37774
BBC43294.1 AP018469_p6 hypothetical protein phrog_7999 unknown function unknown function 1 1273 1959
BBC43335.1 AP018469_p47 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36237 36485
BBC43309.1 AP018469_p21 putitive tail assembly chaperone phrog_3656 tail assembly chaperone tail 1 12813 13310
BBC43361.1 AP018469_p73 HNH endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 48583 49059
BBC43316.1 AP018469_p28 putitive minor tail protein phrog_746 minor tail protein tail 1 22272 24581
BBC43344.1 AP018469_p56 hypothetical protein phrog_474 phosphofructokinase other 1 39052 39447
BBC43315.1 AP018469_p27 putitive minor tail protein phrog_1736 minor tail protein tail 1 22034 22279
BBC43367.1 AP018469_p79 hypothetical protein phrog_2974 unknown function unknown function 1 52223 52492
BBC43293.1 AP018469_p5 hypothetical protein phrog_1454 unknown function unknown function 1 911 1273
BBC43330.1 AP018469_p42 hypothetical protein phrog_8324 unknown function unknown function 1 32390 32737
BBC43342.1 AP018469_p54 hypothetical protein phrog_1622 unknown function unknown function 1 38120 38359
BBC43351.1 AP018469_p63 hypothetical protein phrog_10545 unknown function unknown function 1 41939 42082
BBC43311.1 AP018469_p23 putitive minor tail protein phrog_106 minor tail protein tail 1 17489 18622
BBC43324.1 AP018469_p36 phosphoesterase phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29432 30622
BBC43363.1 AP018469_p75 HTH DNA binding protein phrog_908 unknown function unknown function 1 49773 50651
BBC43329.1 AP018469_p41 hypothetical protein phrog_3851 unknown function unknown function 1 32004 32393
BBC43373.1 AP018469_p85 hypothetical protein phrog_11871 unknown function unknown function 1 53896 54255
BBC43369.1 AP018469_p81 hypothetical protein phrog_7536 unknown function unknown function 1 52884 53057
BBC43333.1 AP018469_p45 hypothetical protein phrog_950 unknown function unknown function -1 34841 35662