| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AP018487 |
Definition |
Mycobacterium phage HC DNA, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus; unclassified Brujitavirus. |
DB of origin |
NUCCORE |
Length |
46305 |
Host Name |
Mycobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
67.17 |
Number of singletons |
4 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| BBC53915.1 | AP018487_p41 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 30532 | 30723 |
| BBC53922.1 | AP018487_p48 | FtsK-like protein | phrog_6152 | unknown function | unknown function | 1 | 33423 | 34487 |
| BBC53942.1 | AP018487_p68 | hypothetical protein | phrog_33337 | unknown function | unknown function | 1 | 42138 | 42293 |
| BBC53943.1 | AP018487_p69 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 42302 | 42475 |
| BBC53876.1 | AP018487_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 521 | 2080 |
| BBC53934.1 | AP018487_p60 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 39145 | 39687 |
| BBC53948.1 | AP018487_p74 | hypothetical protein | phrog_23534 | unknown function | unknown function | 1 | 43760 | 44011 |
| BBC53926.1 | AP018487_p52 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 35682 | 35999 |
| BBC53928.1 | AP018487_p54 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 36423 | 36575 |
| BBC53902.1 | AP018487_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 24164 | 25342 |
| BBC53945.1 | AP018487_p71 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 42768 | 42974 |
| BBC53905.1 | AP018487_p31 | toxin-antitoxin system protein | phrog_8245 | HicB-like antitoxin | moron, auxiliary metabolic gene and host takeover | -1 | 26039 | 26479 |
| BBC53880.1 | AP018487_p6 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 4163 | 5107 |
| BBC53917.1 | AP018487_p43 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 30896 | 31036 |
| BBC53936.1 | AP018487_p62 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 39977 | 40879 |
| BBC53930.1 | AP018487_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37683 | 37784 |
| BBC53912.1 | AP018487_p38 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29567 | 30004 |
| BBC53932.1 | AP018487_p58 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 38076 | 38210 |
| BBC53895.1 | AP018487_p21 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19081 | 21369 |
| BBC53947.1 | AP018487_p73 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 43335 | 43763 |
| BBC53933.1 | AP018487_p59 | hypothetical protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 38210 | 39148 |
| BBC53882.1 | AP018487_p8 | head-to-tail connector protein | phrog_9538 | head-tail connector protein | connector | 1 | 6728 | 7006 |
| BBC53881.1 | AP018487_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5104 | 6651 |
| BBC53892.1 | AP018487_p18 | hypothetical protein | phrog_6832 | unknown function | unknown function | 1 | 16319 | 16489 |
| BBC53898.1 | AP018487_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22587 | 22949 |
| BBC53896.1 | AP018487_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21369 | 22406 |
| BBC53920.1 | AP018487_p46 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32186 | 33181 |
| BBC53939.1 | AP018487_p65 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 41299 | 41472 |
| BBC53904.1 | AP018487_p30 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25611 | 25973 |
| BBC53910.1 | AP018487_p36 | hypothetical protein | phrog_10253 | unknown function | unknown function | 1 | 28820 | 28987 |
| BBC53900.1 | AP018487_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23126 | 23326 |
| BBC53921.1 | AP018487_p47 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33178 | 33426 |
| BBC53883.1 | AP018487_p9 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 6987 | 7532 |
| BBC53919.1 | AP018487_p45 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31260 | 32189 |
| BBC53950.1 | AP018487_p76 | glycosyltransferase | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 44284 | 45180 |
| BBC53901.1 | AP018487_p27 | lysin A | phrog_1512 | endolysin | lysis | 1 | 23214 | 24167 |
| BBC53929.1 | AP018487_p55 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 36568 | 37686 |
| BBC53906.1 | AP018487_p32 | toxin-antitoxin system protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 26483 | 26698 |
| BBC53935.1 | AP018487_p61 | hypothetical protein | phrog_20896 | unknown function | unknown function | 1 | 39684 | 39980 |
| BBC53923.1 | AP018487_p49 | RusA-like DNA endonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34484 | 34990 |
| BBC53891.1 | AP018487_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14592 | 16319 |
| BBC53893.1 | AP018487_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16486 | 18219 |
| BBC53877.1 | AP018487_p3 | hypothetical protein | phrog_16366 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 2103 | 2291 |
| BBC53918.1 | AP018487_p44 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31033 | 31263 |
| BBC53885.1 | AP018487_p11 | head-to-tail connector protein | phrog_2325 | minor tail protein | tail | 1 | 7921 | 8361 |
| BBC53952.1 | AP018487_p78 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45878 | 46168 |
| BBC53940.1 | AP018487_p66 | helix-turn-helix DNA binding protein | singleton | unknown function | unknown function | 1 | 41469 | 41882 |
| BBC53875.1 | AP018487_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 67 | 540 |
| BBC53938.1 | AP018487_p64 | hypothetical protein | phrog_33337 | unknown function | unknown function | 1 | 41135 | 41290 |
| BBC53907.1 | AP018487_p33 | hypothetical protein | phrog_21924 | unknown function | unknown function | -1 | 26774 | 27148 |
| BBC53941.1 | AP018487_p67 | hypothetical protein | phrog_17037 | unknown function | unknown function | 1 | 41998 | 42141 |
| BBC53931.1 | AP018487_p57 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 37781 | 37933 |
| BBC53903.1 | AP018487_p29 | holin | phrog_443 | holin | lysis | 1 | 25369 | 25614 |
| BBC53927.1 | AP018487_p53 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 35996 | 36430 |
| BBC53878.1 | AP018487_p4 | phage portal protein | phrog_12 | portal protein | head and packaging | 1 | 2288 | 3709 |
| BBC53944.1 | AP018487_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42472 | 42675 |
| BBC53887.1 | AP018487_p13 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 8865 | 9665 |
| BBC53911.1 | AP018487_p37 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 28984 | 29496 |
| BBC53937.1 | AP018487_p63 | hypothetical protein | phrog_17037 | unknown function | unknown function | 1 | 40995 | 41138 |
| BBC53894.1 | AP018487_p20 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 18233 | 19084 |
| BBC53886.1 | AP018487_p12 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 8354 | 8773 |
| BBC53897.1 | AP018487_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22421 | 22570 |
| BBC53888.1 | AP018487_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9777 | 10271 |
| BBC53890.1 | AP018487_p16 | minor tail protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10774 | 14595 |
| BBC53914.1 | AP018487_p40 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 30257 | 30532 |
| BBC53946.1 | AP018487_p72 | hypothetical protein | phrog_20391 | unknown function | unknown function | 1 | 43000 | 43338 |
| BBC53879.1 | AP018487_p5 | hyaluronan lyase | phrog_21017 | unknown function | unknown function | 1 | 3709 | 4140 |
| BBC53884.1 | AP018487_p10 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 7529 | 7921 |
| BBC53949.1 | AP018487_p75 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 44013 | 44270 |
| BBC53916.1 | AP018487_p42 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 30720 | 30899 |
| BBC53908.1 | AP018487_p34 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27658 | 28527 |
| BBC53924.1 | AP018487_p50 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 34984 | 35226 |
| BBC53909.1 | AP018487_p35 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28524 | 28823 |
| BBC53899.1 | AP018487_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22949 | 23119 |
| BBC53925.1 | AP018487_p51 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 35223 | 35507 |
| BBC53889.1 | AP018487_p15 | hypothetical protein | phrog_25545 | unknown function | unknown function | 1 | 10387 | 10770 |
| BBC53913.1 | AP018487_p39 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 30018 | 30260 |
| BBC53951.1 | AP018487_p77 | glycosyltransferase | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 45180 | 45878 |