Genomic map of Mycobacterium phage HC (AP018487)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AP018487
Definition
Mycobacterium phage HC DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus; unclassified Brujitavirus.
DB of origin
NUCCORE
Length
46305
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
78
%GC
67.17
Number of singletons
4
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
BBC53915.1 AP018487_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30532 30723
BBC53922.1 AP018487_p48 FtsK-like protein phrog_6152 unknown function unknown function 1 33423 34487
BBC53942.1 AP018487_p68 hypothetical protein phrog_33337 unknown function unknown function 1 42138 42293
BBC53943.1 AP018487_p69 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 42302 42475
BBC53876.1 AP018487_p2 terminase phrog_9 terminase large subunit head and packaging 1 521 2080
BBC53934.1 AP018487_p60 hypothetical protein phrog_3599 unknown function unknown function 1 39145 39687
BBC53948.1 AP018487_p74 hypothetical protein phrog_23534 unknown function unknown function 1 43760 44011
BBC53926.1 AP018487_p52 hypothetical protein phrog_2060 DNA methyltransferase other 1 35682 35999
BBC53928.1 AP018487_p54 hypothetical protein phrog_5921 unknown function unknown function 1 36423 36575
BBC53902.1 AP018487_p28 lysin B phrog_102 endolysin lysis 1 24164 25342
BBC53945.1 AP018487_p71 hypothetical protein phrog_1869 unknown function unknown function 1 42768 42974
BBC53905.1 AP018487_p31 toxin-antitoxin system protein phrog_8245 HicB-like antitoxin moron, auxiliary metabolic gene and host takeover -1 26039 26479
BBC53880.1 AP018487_p6 capsid maturation protease phrog_80 head maturation protease head and packaging 1 4163 5107
BBC53917.1 AP018487_p43 hypothetical protein phrog_5806 unknown function unknown function 1 30896 31036
BBC53936.1 AP018487_p62 hypothetical protein phrog_908 unknown function unknown function 1 39977 40879
BBC53930.1 AP018487_p56 hypothetical protein singleton unknown function unknown function 1 37683 37784
BBC53912.1 AP018487_p38 hypothetical protein phrog_658 unknown function unknown function 1 29567 30004
BBC53932.1 AP018487_p58 hypothetical protein phrog_2451 unknown function unknown function 1 38076 38210
BBC53895.1 AP018487_p21 minor tail protein phrog_3493 minor tail protein tail 1 19081 21369
BBC53947.1 AP018487_p73 hypothetical protein phrog_1186 unknown function unknown function 1 43335 43763
BBC53933.1 AP018487_p59 hypothetical protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 38210 39148
BBC53882.1 AP018487_p8 head-to-tail connector protein phrog_9538 head-tail connector protein connector 1 6728 7006
BBC53881.1 AP018487_p7 major capsid protein phrog_10 major head protein head and packaging 1 5104 6651
BBC53892.1 AP018487_p18 hypothetical protein phrog_6832 unknown function unknown function 1 16319 16489
BBC53898.1 AP018487_p24 hypothetical protein phrog_240 head protein head and packaging 1 22587 22949
BBC53896.1 AP018487_p22 minor tail protein phrog_416 minor tail protein tail 1 21369 22406
BBC53920.1 AP018487_p46 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32186 33181
BBC53939.1 AP018487_p65 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 41299 41472
BBC53904.1 AP018487_p30 hypothetical protein phrog_404 minor tail protein tail 1 25611 25973
BBC53910.1 AP018487_p36 hypothetical protein phrog_10253 unknown function unknown function 1 28820 28987
BBC53900.1 AP018487_p26 hypothetical protein singleton unknown function unknown function -1 23126 23326
BBC53921.1 AP018487_p47 hypothetical protein phrog_4387 unknown function unknown function 1 33178 33426
BBC53883.1 AP018487_p9 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 6987 7532
BBC53919.1 AP018487_p45 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31260 32189
BBC53950.1 AP018487_p76 glycosyltransferase phrog_4447 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 44284 45180
BBC53901.1 AP018487_p27 lysin A phrog_1512 endolysin lysis 1 23214 24167
BBC53929.1 AP018487_p55 DNA methylase phrog_67 DNA methyltransferase other 1 36568 37686
BBC53906.1 AP018487_p32 toxin-antitoxin system protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 26483 26698
BBC53935.1 AP018487_p61 hypothetical protein phrog_20896 unknown function unknown function 1 39684 39980
BBC53923.1 AP018487_p49 RusA-like DNA endonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34484 34990
BBC53891.1 AP018487_p17 minor tail protein phrog_106 minor tail protein tail 1 14592 16319
BBC53893.1 AP018487_p19 minor tail protein phrog_110 minor tail protein tail 1 16486 18219
BBC53877.1 AP018487_p3 hypothetical protein phrog_16366 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 2103 2291
BBC53918.1 AP018487_p44 hypothetical protein phrog_4702 unknown function unknown function 1 31033 31263
BBC53885.1 AP018487_p11 head-to-tail connector protein phrog_2325 minor tail protein tail 1 7921 8361
BBC53952.1 AP018487_p78 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45878 46168
BBC53940.1 AP018487_p66 helix-turn-helix DNA binding protein singleton unknown function unknown function 1 41469 41882
BBC53875.1 AP018487_p1 hypothetical protein phrog_226 minor tail protein tail 1 67 540
BBC53938.1 AP018487_p64 hypothetical protein phrog_33337 unknown function unknown function 1 41135 41290
BBC53907.1 AP018487_p33 hypothetical protein phrog_21924 unknown function unknown function -1 26774 27148
BBC53941.1 AP018487_p67 hypothetical protein phrog_17037 unknown function unknown function 1 41998 42141
BBC53931.1 AP018487_p57 hypothetical protein phrog_2070 unknown function unknown function 1 37781 37933
BBC53903.1 AP018487_p29 holin phrog_443 holin lysis 1 25369 25614
BBC53927.1 AP018487_p53 hypothetical protein phrog_647 unknown function unknown function 1 35996 36430
BBC53878.1 AP018487_p4 phage portal protein phrog_12 portal protein head and packaging 1 2288 3709
BBC53944.1 AP018487_p70 hypothetical protein singleton unknown function unknown function 1 42472 42675
BBC53887.1 AP018487_p13 hypothetical protein phrog_476 major tail protein tail 1 8865 9665
BBC53911.1 AP018487_p37 hypothetical protein phrog_5015 unknown function unknown function 1 28984 29496
BBC53937.1 AP018487_p63 hypothetical protein phrog_17037 unknown function unknown function 1 40995 41138
BBC53894.1 AP018487_p20 minor tail protein phrog_732 minor tail protein tail 1 18233 19084
BBC53886.1 AP018487_p12 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 8354 8773
BBC53897.1 AP018487_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22421 22570
BBC53888.1 AP018487_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9777 10271
BBC53890.1 AP018487_p16 minor tail protein phrog_2337 tail length tape measure protein tail 1 10774 14595
BBC53914.1 AP018487_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30257 30532
BBC53946.1 AP018487_p72 hypothetical protein phrog_20391 unknown function unknown function 1 43000 43338
BBC53879.1 AP018487_p5 hyaluronan lyase phrog_21017 unknown function unknown function 1 3709 4140
BBC53884.1 AP018487_p10 head-to-tail connector protein phrog_1531 head closure connector 1 7529 7921
BBC53949.1 AP018487_p75 hypothetical protein phrog_1385 unknown function unknown function 1 44013 44270
BBC53916.1 AP018487_p42 hypothetical protein phrog_5559 unknown function unknown function 1 30720 30899
BBC53908.1 AP018487_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27658 28527
BBC53924.1 AP018487_p50 hypothetical protein phrog_6109 unknown function unknown function 1 34984 35226
BBC53909.1 AP018487_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28524 28823
BBC53899.1 AP018487_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22949 23119
BBC53925.1 AP018487_p51 hypothetical protein phrog_3821 unknown function unknown function 1 35223 35507
BBC53889.1 AP018487_p15 hypothetical protein phrog_25545 unknown function unknown function 1 10387 10770
BBC53913.1 AP018487_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30018 30260
BBC53951.1 AP018487_p77 glycosyltransferase phrog_1721 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 45180 45878