| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY441783 |
Definition |
Bacteriophage PR772, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus; Pseudomonas virus PRD1. |
DB of origin |
PVOG |
Length |
14946 |
Host Name |
Enterobacteriaceae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
32 |
%GC |
48.34 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAR99742.1 | AY441783_p4 | receptor binding protein | phrog_16118 | unknown function | unknown function | 1 | 3131 | 4906 |
| AAR99739.1 | AY441783_p1 | terminal protein | phrog_15886 | unknown function | unknown function | 1 | 236 | 1015 |
| AAR99764.1 | AY441783_p26 | transglycosylase | phrog_13449 | transglycosylase | other | 1 | 12193 | 13002 |
| AAR99744.1 | AY441783_p6 | penton protein | phrog_15879 | unknown function | unknown function | 1 | 4910 | 5290 |
| AAR99769.1 | AY441783_p31 | ssDNA-binding protein | phrog_15890 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13863 | 14147 |
| AAR99758.1 | AY441783_p20 | DNA delivery protein | phrog_14462 | unknown function | unknown function | 1 | 10171 | 10443 |
| AAR99752.1 | AY441783_p14 | ORFi | phrog_15703 | unknown function | unknown function | 1 | 8335 | 8463 |
| AAR99767.1 | AY441783_p29 | ORFu | phrog_89 | Rz-like spanin | lysis | 1 | 13321 | 13707 |
| AAR99768.1 | AY441783_p30 | ORFv | phrog_456 | Rz-like spanin | lysis | 1 | 13631 | 13903 |
| AAR99759.1 | AY441783_p21 | DNA delivery protein | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10443 | 10607 |
| AAR99747.1 | AY441783_p9 | assembly protein | phrog_15795 | unknown function | unknown function | 1 | 6331 | 6591 |
| AAR99754.1 | AY441783_p16 | major capsid protein | phrog_5863 | minor head protein | head and packaging | 1 | 8598 | 9785 |
| AAR99745.1 | AY441783_p7 | ORFd | singleton | unknown function | unknown function | 1 | 5103 | 5297 |
| AAR99755.1 | AY441783_p17 | ORFh | singleton | unknown function | unknown function | 1 | 9430 | 9684 |
| AAR99750.1 | AY441783_p12 | assembly protein | phrog_14814 | unknown function | unknown function | 1 | 7032 | 7643 |
| AAR99762.1 | AY441783_p24 | DNA delivery protein | phrog_16567 | unknown function | unknown function | 1 | 11205 | 11828 |
| AAR99761.1 | AY441783_p23 | minor capsid protein | phrog_15441 | minor head protein | head and packaging | 1 | 10836 | 11090 |
| AAR99751.1 | AY441783_p13 | DNA packaging ATPase | phrog_2666 | terminase large subunit | head and packaging | 1 | 7640 | 8323 |
| AAR99766.1 | AY441783_p28 | ORFt | phrog_785 | holin | lysis | 1 | 12999 | 13352 |
| AAR99756.1 | AY441783_p18 | DNA packaging protein | phrog_15626 | unknown function | unknown function | 1 | 9804 | 9947 |
| AAR99746.1 | AY441783_p8 | spike protein | phrog_15674 | major spike protein | head and packaging | 1 | 5290 | 6312 |
| AAR99743.1 | AY441783_p5 | ORFb | singleton | unknown function | unknown function | 1 | 3456 | 3590 |
| AAR99757.1 | AY441783_p19 | ORFl | phrog_16332 | unknown function | unknown function | 1 | 10047 | 10169 |
| AAR99765.1 | AY441783_p27 | DNA delivery protein | phrog_15454 | unknown function | unknown function | 1 | 12538 | 13002 |
| AAR99740.1 | AY441783_p2 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1019 | 2680 |
| AAR99763.1 | AY441783_p25 | infectivity protein | phrog_15637 | unknown function | unknown function | 1 | 11839 | 12192 |
| AAR99741.1 | AY441783_p3 | muramidase | phrog_2860 | endolysin | head and packaging | 1 | 2637 | 3131 |
| AAR99748.1 | AY441783_p10 | assembly protein | phrog_14809 | unknown function | unknown function | 1 | 6581 | 6787 |
| AAR99770.1 | AY441783_p32 | ssDNA-binding protein | phrog_14847 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14220 | 14702 |
| AAR99753.1 | AY441783_p15 | DNA packaging protein | phrog_16195 | unknown function | unknown function | 1 | 8463 | 8591 |
| AAR99749.1 | AY441783_p11 | minor capsid protein | phrog_15059 | minor head protein | head and packaging | 1 | 6787 | 7287 |
| AAR99760.1 | AY441783_p22 | DNA delivery protein | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10620 | 10826 |