Genomic map of Escherichia virus T5 (AY587007)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AY587007
Definition
Bacteriophage T5 strain ATCC 11303-B5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
DB of origin
NUCCORE
Length
121752
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
168
%GC
39.32
Number of singletons
8
Number of paralogs
24

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AAX11967.1 AY587007_p30 probable phosphoesterase phrog_547 phosphoesterase other -1 16837 17358
AAX12016.1 AY587007_p79 hypothetical protein singleton unknown function unknown function -1 42666 42833
AAX12097.1 AY587007_p160 hypothetical protein phrog_37115 unknown function unknown function -1 117126 117287
AAX12048.1 AY587007_p111 hypothetical protein singleton unknown function unknown function 1 69700 69924
AAX11949.1 AY587007_p12 hypothetical protein phrog_16673 unknown function unknown function 1 7193 7426
AAX12002.1 AY587007_p65 hypothetical protein phrog_5032 unknown function unknown function -1 33927 34445
AAX12081.1 AY587007_p144 hypothetical protein phrog_2 terminase large subunit head and packaging -1 106700 108016
AAX12053.1 AY587007_p116 hypothetical protein (D10 3' region) phrog_4258 unknown function unknown function 1 75808 76092
AAX11970.1 AY587007_p33 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 18567 18857
AAX12050.1 AY587007_p113 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 71271 73748
AAX12100.1 AY587007_p163 hypothetical protein phrog_16673 unknown function unknown function 1 118806 119039
AAX11979.1 AY587007_p42 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23166 23615
AAX12031.1 AY587007_p94 hypothetical protein phrog_11748 unknown function unknown function 1 55855 56235
AAX12104.1 AY587007_p167 hypothetical protein phrog_4379 unknown function unknown function 1 119834 120178
AAX12041.1 AY587007_p104 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 64245 64655
AAX12060.1 AY587007_p123 hypothetical protein phrog_5592 unknown function unknown function 1 81473 81721
AAX12073.1 AY587007_p136 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 100351 101118
AAX11957.1 AY587007_p20 hypothetical protein phrog_6021 unknown function unknown function -1 12615 12848
AAX12029.1 AY587007_p92 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other -1 52757 53509
AAX11975.1 AY587007_p38 Clp protease phrog_1827 ATP-dependent protease other -1 21075 21674
AAX12080.1 AY587007_p143 hypothetical protein YomD phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 105855 106529
AAX12101.1 AY587007_p164 hypothetical protein phrog_5145 unknown function unknown function 1 119158 119388
AAX12072.1 AY587007_p135 hypothetical protein P1-like protein phrog_3907 tail terminator connector -1 99862 100347
AAX11993.1 AY587007_p56 hypothetical protein phrog_5919 unknown function unknown function -1 28673 28837
AAX11958.1 AY587007_p21 hypothetical protein phrog_9887 unknown function unknown function -1 12836 13126
AAX11986.1 AY587007_p49 hypothetical protein phrog_4821 unknown function unknown function -1 26065 26361
AAX12093.1 AY587007_p156 hypothetical protein phrog_33010 unknown function unknown function -1 114939 115085
AAX12099.1 AY587007_p162 hypothetical protein phrog_4263 unknown function unknown function 1 118030 118767
AAX11999.1 AY587007_p62 hypothetical protein phrog_6221 unknown function unknown function -1 32161 32328
AAX12026.1 AY587007_p89 ribonucleoside diphosphate reductase I beta chain phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 48311 49456
AAX12001.1 AY587007_p64 hypothetical protein phrog_5473 unknown function unknown function -1 33585 33770
AAX12036.1 AY587007_p99 hypothetical protein Aeh1ORF298c-like protein phrog_2502 unknown function unknown function 1 58605 58997
AAX12028.1 AY587007_p91 ribonucleoside-diphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 50083 52413
AAX11996.1 AY587007_p59 hypothetical protein phrog_2210 unknown function unknown function -1 29901 30101
AAX12020.1 AY587007_p83 hypothetical protein phrog_4586 unknown function unknown function -1 45099 45335
AAX12083.1 AY587007_p146 tail protein Pb5 phrog_4815 receptor binding tail protein tail -1 108509 110431
AAX12056.1 AY587007_p119 probable exonuclease subunit 2 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 77823 79691
AAX12023.1 AY587007_p86 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 46332 46667
AAX11963.1 AY587007_p26 hypothetical protein phrog_4804 unknown function unknown function -1 15221 15466
AAX12008.1 AY587007_p71 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 37201 37719
AAX11985.1 AY587007_p48 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25556 26068
AAX11946.1 AY587007_p9 hypothetical protein phrog_37115 unknown function unknown function -1 5513 5674
AAX12064.1 AY587007_p127 tail protein Pb3 phrog_31 central tail fiber J tail -1 88633 91482
AAX12065.1 AY587007_p128 hypothetical protein phrog_1302 distal tail protein tail -1 91479 92093
AAX11973.1 AY587007_p36 lysozyme phrog_465 endolysin lysis -1 19852 20265
AAX11959.1 AY587007_p22 hypothetical protein phrog_4605 unknown function unknown function -1 13119 13607
AAX12092.1 AY587007_p155 probable A1 protein phrog_1745 DNA transfer protein other -1 113319 114902
AAX12075.1 AY587007_p138 hypothetical protein-like protein phrog_10 major head protein head and packaging -1 101690 102961
AAX11991.1 AY587007_p54 formate acetyltransferase phrog_1209 unknown function unknown function -1 27577 27945
AAX11974.1 AY587007_p37 lysis protein phrog_860 holin lysis -1 20262 20918
AAX12067.1 AY587007_p130 hypothetical protein RB49ORF238c-like protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 95859 96656
AAX11953.1 AY587007_p16 hypothetical protein phrog_4379 unknown function unknown function 1 8221 8565
AAX12074.1 AY587007_p137 hypothetical protein phrog_442 head-tail adaptor connector -1 101118 101552
AAX11998.1 AY587007_p61 HNH endodeoxyribonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 30943 31527
AAX12077.1 AY587007_p140 major tail subunit phrog_2973 Hoc-like head decoration head and packaging -1 103720 104214
AAX12024.1 AY587007_p87 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 46942 47781
AAX12011.1 AY587007_p74 cAMP-dependent protein kinase catalytic subunit phrog_7894 unknown function unknown function 1 38972 39388
AAX11994.1 AY587007_p57 hypothetical protein phrog_5598 unknown function unknown function -1 28830 29081
AAX12045.1 AY587007_p108 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 66609 67388
AAX12089.1 AY587007_p152 5'-deoxyribonucleotidase phrog_415 polynucleotide kinase other -1 111737 112471
AAX11969.1 AY587007_p32 hypothetical protein phrog_7354 major head protein head and packaging -1 18224 18469
AAX12005.1 AY587007_p68 hypothetical protein phrog_4551 unknown function unknown function -1 35538 35813
AAX12054.1 AY587007_p117 D11 protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 76085 76858
AAX11968.1 AY587007_p31 Ser/Thr protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 17358 18221
AAX11939.1 AY587007_p2 hypothetical protein phrog_4576 unknown function unknown function -1 939 1334
AAX12071.1 AY587007_p134 major tail protein gp25-like protein phrog_3575 major tail protein tail -1 98441 99835
AAX12094.1 AY587007_p157 probable A1 protein precursor phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 115085 115282
AAX11983.1 AY587007_p46 hypothetical protein singleton unknown function unknown function -1 24965 25057
AAX12052.1 AY587007_p115 probable helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 74235 75587
AAX11987.1 AY587007_p50 hypothetical protein phrog_2855 unknown function unknown function -1 26354 26635
AAX12022.1 AY587007_p85 hypothetical protein phrog_4593 unknown function unknown function -1 45977 46255
AAX11989.1 AY587007_p52 hypothetical protein singleton unknown function unknown function -1 26924 27031
AAX12091.1 AY587007_p154 hypothetical protein phrog_23906 unknown function unknown function -1 112984 113262
AAX11972.1 AY587007_p35 hypothetical protein phrog_5944 unknown function unknown function -1 19357 19773
AAX12010.1 AY587007_p73 hypothetical protein singleton unknown function unknown function 1 38462 38950
AAX12012.1 AY587007_p75 transmembrane protein phrog_200 lipoprotein other -1 39712 40659
AAX12085.1 AY587007_p148 hypothetical protein phrog_8596 unknown function unknown function 1 110863 111036
AAX12043.1 AY587007_p106 hypothetical protein phrog_4053 transcriptional regulator transcription regulation 1 65039 65347
AAX11977.1 AY587007_p40 hypothetical protein phrog_812 Rz-like spanin lysis -1 22439 22792
AAX12027.1 AY587007_p90 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 49456 49980
AAX12105.1 AY587007_p168 hypothetical protein phrog_22819 unknown function unknown function 1 120175 120270
AAX12025.1 AY587007_p88 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 47781 48314
AAX11950.1 AY587007_p13 hypothetical protein phrog_5145 unknown function unknown function 1 7545 7775
AAX11940.1 AY587007_p3 hypothetical protein phrog_23906 unknown function unknown function -1 1371 1649
AAX12057.1 AY587007_p120 D14 protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 79695 80177
AAX12066.1 AY587007_p129 pore-forming tail tip protein Pb2 phrog_3779 tail length tape measure protein tail -1 92203 95862
AAX12030.1 AY587007_p93 anaerobic ribonucleoside-triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 53880 55754
AAX11978.1 AY587007_p41 hypothetical protein phrog_739 Rz-like spanin lysis -1 22723 23127
AAX12062.1 AY587007_p125 hypothetical protein phrog_1084 unknown function unknown function -1 86139 86561
AAX11961.1 AY587007_p24 hypothetical protein phrog_4215 unknown function unknown function -1 14147 14608
AAX11941.1 AY587007_p4 probable A1 protein phrog_1745 DNA transfer protein other -1 1706 3289
AAX12058.1 AY587007_p121 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 80222 81052
AAX12095.1 AY587007_p158 A2 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 115339 115746
AAX12032.1 AY587007_p95 hypothetical protein phrog_5236 unknown function unknown function 1 56228 56461
AAX11964.1 AY587007_p27 hypothetical protein phrog_4984 unknown function unknown function -1 15463 15744
AAX12009.1 AY587007_p72 hypothetical protein singleton unknown function unknown function 1 38160 38393
AAX11956.1 AY587007_p19 hypothetical protein phrog_5271 unknown function unknown function -1 11822 12430
AAX11966.1 AY587007_p29 hypothetical protein phrog_4979 unknown function unknown function -1 16238 16669
AAX12069.1 AY587007_p132 hypothetical protein-like protein phrog_313 Tail assembly chaperone tail -1 97136 97540
AAX12047.1 AY587007_p110 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 68180 69703
AAX12088.1 AY587007_p151 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover 1 111327 111572
AAX11960.1 AY587007_p23 hypothetical protein phrog_4905 unknown function unknown function -1 13828 14166
AAX12090.1 AY587007_p153 hypothetical protein phrog_4576 unknown function unknown function -1 112552 112947
AAX12103.1 AY587007_p166 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 119620 119832
AAX12044.1 AY587007_p107 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 65435 66406
AAX11981.1 AY587007_p44 hypothetical protein singleton unknown function unknown function -1 23955 24356
AAX12004.1 AY587007_p67 hypothetical protein phrog_5876 unknown function unknown function -1 34727 34999
AAX12018.1 AY587007_p81 hypothetical protein phrog_5252 unknown function unknown function -1 44117 44299
AAX11942.1 AY587007_p5 hypothetical protein phrog_33010 unknown function unknown function -1 3326 3472
AAX12087.1 AY587007_p150 hypothetical protein phrog_5851 unknown function unknown function 1 111143 111334
AAX12061.1 AY587007_p124 L-shaped tail fibre protein phrog_24369 tail fiber protein tail -1 81949 86139
AAX12063.1 AY587007_p126 tail protein Pb4 phrog_3890 straight fibre tail protein tail -1 86566 88632
AAX12042.1 AY587007_p105 hypothetical protein phrog_3696 unknown function unknown function 1 64692 64988
AAX12039.1 AY587007_p102 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 63193 63897
AAX11980.1 AY587007_p43 hypothetical protein singleton unknown function unknown function -1 23658 23942
AAX12055.1 AY587007_p118 possible exonuclease subunit 1 phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 76895 77872
AAX11955.1 AY587007_p18 hypothetical protein phrog_8583 unknown function unknown function -1 10856 11740
AAX12038.1 AY587007_p101 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62388 62906
AAX11947.1 AY587007_p10 hypothetical protein phrog_31829 unknown function unknown function -1 5662 5853
AAX11944.1 AY587007_p7 A2 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3726 4133
AAX12098.1 AY587007_p161 hypothetical protein phrog_31829 unknown function unknown function -1 117275 117466
AAX11951.1 AY587007_p14 hypothetical protein phrog_5607 unknown function unknown function 1 7825 8004
AAX11982.1 AY587007_p45 hypothetical protein phrog_5468 unknown function unknown function -1 24486 24854
AAX12007.1 AY587007_p70 hypothetical protein phrog_14736 HNH endonuclease DNA, RNA and nucleotide metabolism -1 36304 36984
AAX12076.1 AY587007_p139 prohead protease phrog_80 head maturation protease head and packaging -1 103084 103716
AAX12068.1 AY587007_p131 hypothetical protein phrog_3914 tail assembly chaperone tail -1 96706 97074
AAX12015.1 AY587007_p78 spore cortex-lytic enzyme precursor phrog_938 endolysin lysis -1 42211 42660
AAX12059.1 AY587007_p122 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 81049 81495
AAX12086.1 AY587007_p149 hypothetical protein phrog_6369 unknown function unknown function 1 111036 111143
AAX12079.1 AY587007_p142 hypothetical protein phrog_3497 unknown function unknown function -1 105428 105865
AAX11952.1 AY587007_p15 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 8007 8219
AAX12033.1 AY587007_p96 transferase phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 56516 57334
AAX12021.1 AY587007_p84 hypothetical protein phrog_4516 unknown function unknown function -1 45378 45893
AAX12082.1 AY587007_p145 SciB protein phrog_3802 terminase small subunit head and packaging -1 108016 108498
AAX12049.1 AY587007_p112 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 70228 71118
AAX12006.1 AY587007_p69 hypothetical protein phrog_5153 unknown function unknown function -1 35904 36110
AAX12013.1 AY587007_p76 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 41538 41972
AAX11954.1 AY587007_p17 hypothetical protein phrog_22819 unknown function unknown function 1 8562 8657
AAX12035.1 AY587007_p98 hypothetical protein phrog_2502 unknown function unknown function 1 58176 58595
AAX11948.1 AY587007_p11 hypothetical protein phrog_4263 unknown function unknown function 1 6417 7154
AAX11962.1 AY587007_p25 hypothetical protein phrog_4731 unknown function unknown function -1 14905 15231
AAX12070.1 AY587007_p133 minor tail protein gp24-like protein phrog_3889 base plate tail tube protein tail -1 97540 98436
AAX12051.1 AY587007_p114 hypothetical protein (D10 5' region) phrog_4386 unknown function unknown function 1 73741 74238
AAX11976.1 AY587007_p39 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 21687 22439
AAX12102.1 AY587007_p165 hypothetical protein phrog_5607 unknown function unknown function 1 119438 119617
AAX12084.1 AY587007_p147 lytic conversion lipoprotein precursor phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 110511 110744
AAX11990.1 AY587007_p53 hypothetical protein phrog_4499 unknown function unknown function -1 27181 27495
AAX12034.1 AY587007_p97 hypothetical protein Aeh1ORF302c-like protein phrog_1818 unknown function unknown function 1 57657 58163
AAX12040.1 AY587007_p103 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 63890 64141
AAX12078.1 AY587007_p141 portal protein phrog_12 portal protein head and packaging -1 104217 105428
AAX11992.1 AY587007_p55 hypothetical protein phrog_4760 unknown function unknown function -1 28223 28513
AAX12046.1 AY587007_p109 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 67381 68148
AAX12003.1 AY587007_p66 hypothetical protein phrog_34563 unknown function unknown function -1 34548 34676
AAX11984.1 AY587007_p47 hypothetical protein phrog_5792 unknown function unknown function -1 25246 25575
AAX12096.1 AY587007_p159 hypothetical 9.2 kDa protein phrog_3747 unknown function unknown function -1 115842 116093
AAX12014.1 AY587007_p77 hypothetical protein phrog_5077 unknown function unknown function -1 41972 42142
AAX11965.1 AY587007_p28 hypothetical protein phrog_3880 unknown function unknown function -1 15908 16159
AAX12037.1 AY587007_p100 replication origin binding protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 59615 62401
AAX12017.1 AY587007_p80 hypothetical protein phrog_1491 tail fiber protein tail -1 43426 44064
AAX11945.1 AY587007_p8 hypothetical 9.2 kDa protein phrog_3747 unknown function unknown function -1 4229 4480
AAX11938.1 AY587007_p1 5'-deoxyribonucleotidase phrog_415 polynucleotide kinase other -1 124 858
AAX11997.1 AY587007_p60 hypothetical protein phrog_16298 unknown function unknown function -1 30572 30745
AAX11943.1 AY587007_p6 probable A1 protein precursor phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 3472 3669
AAX11971.1 AY587007_p34 hypothetical protein phrog_4328 unknown function unknown function -1 18850 19281
AAX11995.1 AY587007_p58 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29318 29899
AAX12019.1 AY587007_p82 hypothetical protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 44324 44992
AAX11988.1 AY587007_p51 hypothetical protein phrog_5021 unknown function unknown function -1 26712 26915
AAX12000.1 AY587007_p63 prophage pi3 protein 38-like sequence phrog_3972 unknown function unknown function -1 33126 33554