| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY657002 |
Definition |
Streptococcus phage phi1207.3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
52491 |
Host Name |
Streptococcus pyogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
39.15 |
Number of singletons |
8 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAT72398.1 | AY657002_p55 | hypothetical protein | phrog_2996 | unknown function | unknown function | 1 | 48752 | 48913 |
| AAT72389.1 | AY657002_p46 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 37341 | 37658 |
| AAT72360.1 | AY657002_p17 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 15728 | 17683 |
| AAT72373.1 | AY657002_p30 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26770 | 27135 |
| AAT72396.1 | AY657002_p53 | holin family protein | phrog_372 | tail protein | tail | 1 | 45598 | 47880 |
| AAT72382.1 | AY657002_p39 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 31664 | 33256 |
| AAT72391.1 | AY657002_p48 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 38258 | 38677 |
| AAT72351.1 | AY657002_p8 | SOS responce UmuC protein | phrog_1268 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 6840 | 8255 |
| AAT72349.1 | AY657002_p6 | hypothetical protein | phrog_16386 | unknown function | unknown function | -1 | 6189 | 6488 |
| AAT72345.1 | AY657002_p2 | resolvase | phrog_125 | DNA invertase | DNA, RNA and nucleotide metabolism | 1 | 898 | 2010 |
| AAT72355.1 | AY657002_p12 | C-5 cytosine-specific DNA methylase | phrog_116 | DNA methyltransferase | other | -1 | 9411 | 10637 |
| AAT72368.1 | AY657002_p25 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 23127 | 24503 |
| AAT72357.1 | AY657002_p14 | restriction endonuclease subunit | phrog_16589 | restriction endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12351 | 13598 |
| AAT72344.1 | AY657002_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 113 | 769 |
| AAT72356.1 | AY657002_p13 | restriction endonuclease subunit | singleton | unknown function | unknown function | 1 | 10670 | 12337 |
| AAT72388.1 | AY657002_p45 | tail component protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 36964 | 37344 |
| AAT72401.1 | AY657002_p58 | ADP-ribosyltransferase toxin | singleton | unknown function | unknown function | 1 | 51827 | 52402 |
| AAT72371.1 | AY657002_p28 | hypothetical protein | phrog_2555 | unknown function | unknown function | 1 | 25468 | 25683 |
| AAT72397.1 | AY657002_p54 | N-acetylmuramoyl-L-alanine amidase | phrog_8577 | endolysin | lysis | 1 | 47864 | 48646 |
| AAT72374.1 | AY657002_p31 | hypothetical protein | phrog_2308 | unknown function | unknown function | 1 | 27383 | 27787 |
| AAT72378.1 | AY657002_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30578 | 30676 |
| AAT72362.1 | AY657002_p19 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 17918 | 18490 |
| AAT72379.1 | AY657002_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30686 | 30802 |
| AAT72386.1 | AY657002_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36455 | 36658 |
| AAT72375.1 | AY657002_p32 | DNA methylase | phrog_498 | DNA methyltransferase | other | 1 | 27802 | 29034 |
| AAT72365.1 | AY657002_p22 | hypothetical protein | phrog_3280 | unknown function | unknown function | -1 | 19883 | 20017 |
| AAT72390.1 | AY657002_p47 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 37671 | 38261 |
| AAT72366.1 | AY657002_p23 | DNA primase | phrog_1883 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 20295 | 22580 |
| AAT72364.1 | AY657002_p21 | hypothetical protein | phrog_408 | unknown function | unknown function | -1 | 19585 | 19908 |
| AAT72367.1 | AY657002_p24 | restriction-modification enzyme | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22844 | 23146 |
| AAT72380.1 | AY657002_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30957 | 31103 |
| AAT72370.1 | AY657002_p27 | hypothetical protein | phrog_4709 | unknown function | unknown function | 1 | 25185 | 25412 |
| AAT72387.1 | AY657002_p44 | head tail adaptor | phrog_25 | head closure Hc1 | connector | 1 | 36659 | 36988 |
| AAT72350.1 | AY657002_p7 | YolD-like protein | phrog_16307 | unknown function | unknown function | -1 | 6475 | 6843 |
| AAT72348.1 | AY657002_p5 | Msr(D) | phrog_293 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 4608 | 6071 |
| AAT72383.1 | AY657002_p40 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 33268 | 34509 |
| AAT72347.1 | AY657002_p4 | Mef(A) | phrog_2034 | unknown function | unknown function | 1 | 3271 | 4488 |
| AAT72358.1 | AY657002_p15 | DNA binding zinc finger domain protein | phrog_30403 | unknown function | unknown function | -1 | 13620 | 14774 |
| AAT72354.1 | AY657002_p11 | UmuD MucA-like protein | phrog_4 | transcriptional repressor | transcription regulation | -1 | 8608 | 9297 |
| AAT72384.1 | AY657002_p41 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 34502 | 35188 |
| AAT72399.1 | AY657002_p56 | resolvase | phrog_95 | integrase | integration and excision | 1 | 48971 | 50209 |
| AAT72359.1 | AY657002_p16 | hypothetical protein | phrog_2513 | unknown function | unknown function | 1 | 15120 | 15689 |
| AAT72361.1 | AY657002_p18 | hypothetical protein | phrog_2442 | unknown function | unknown function | -1 | 17732 | 17899 |
| AAT72372.1 | AY657002_p29 | S-adenosylmethionine synthetase | phrog_1569 | unknown function | unknown function | 1 | 25707 | 26768 |
| AAT72352.1 | AY657002_p9 | hypothetical protein | phrog_38371 | unknown function | unknown function | -1 | 8260 | 8400 |
| AAT72393.1 | AY657002_p50 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 38856 | 41975 |
| AAT72346.1 | AY657002_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2025 | 2441 |
| AAT72394.1 | AY657002_p51 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 41972 | 42697 |
| AAT72376.1 | AY657002_p33 | C-5 cytosine-specific DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 29031 | 30197 |
| AAT72400.1 | AY657002_p57 | resolvase | phrog_95 | integrase | integration and excision | 1 | 50206 | 51771 |
| AAT72377.1 | AY657002_p34 | hypothetical protein | phrog_3782 | unknown function | unknown function | 1 | 30313 | 30573 |
| AAT72385.1 | AY657002_p42 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 35204 | 36391 |
| AAT72369.1 | AY657002_p26 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 24496 | 24999 |
| AAT72353.1 | AY657002_p10 | hypothetical protein | phrog_27023 | unknown function | unknown function | -1 | 8378 | 8605 |
| AAT72381.1 | AY657002_p38 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 31186 | 31662 |
| AAT72395.1 | AY657002_p52 | host specificity protein | phrog_2189 | tail protein | tail | 1 | 42682 | 45585 |
| AAT72392.1 | AY657002_p49 | hypothetical protein | phrog_3033 | unknown function | unknown function | 1 | 38686 | 38838 |
| AAT72363.1 | AY657002_p20 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18471 | 19592 |