Genomic map of Streptococcus phage phi1207.3 (AY657002)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
AY657002
Definition
Streptococcus phage phi1207.3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
52491
Host Name
Streptococcus pyogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
39.15
Number of singletons
8
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AAT72398.1 AY657002_p55 hypothetical protein phrog_2996 unknown function unknown function 1 48752 48913
AAT72389.1 AY657002_p46 hypothetical protein phrog_78 tail terminator connector 1 37341 37658
AAT72360.1 AY657002_p17 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 15728 17683
AAT72373.1 AY657002_p30 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 26770 27135
AAT72396.1 AY657002_p53 holin family protein phrog_372 tail protein tail 1 45598 47880
AAT72382.1 AY657002_p39 terminase large subunit phrog_9 terminase large subunit head and packaging 1 31664 33256
AAT72391.1 AY657002_p48 hypothetical protein phrog_709 unknown function unknown function 1 38258 38677
AAT72351.1 AY657002_p8 SOS responce UmuC protein phrog_1268 DNA polymerase DNA, RNA and nucleotide metabolism -1 6840 8255
AAT72349.1 AY657002_p6 hypothetical protein phrog_16386 unknown function unknown function -1 6189 6488
AAT72345.1 AY657002_p2 resolvase phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 1 898 2010
AAT72355.1 AY657002_p12 C-5 cytosine-specific DNA methylase phrog_116 DNA methyltransferase other -1 9411 10637
AAT72368.1 AY657002_p25 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 23127 24503
AAT72357.1 AY657002_p14 restriction endonuclease subunit phrog_16589 restriction endonuclease DNA, RNA and nucleotide metabolism 1 12351 13598
AAT72344.1 AY657002_p1 hypothetical protein singleton unknown function unknown function 1 113 769
AAT72356.1 AY657002_p13 restriction endonuclease subunit singleton unknown function unknown function 1 10670 12337
AAT72388.1 AY657002_p45 tail component protein phrog_5 tail completion or Neck1 protein connector 1 36964 37344
AAT72401.1 AY657002_p58 ADP-ribosyltransferase toxin singleton unknown function unknown function 1 51827 52402
AAT72371.1 AY657002_p28 hypothetical protein phrog_2555 unknown function unknown function 1 25468 25683
AAT72397.1 AY657002_p54 N-acetylmuramoyl-L-alanine amidase phrog_8577 endolysin lysis 1 47864 48646
AAT72374.1 AY657002_p31 hypothetical protein phrog_2308 unknown function unknown function 1 27383 27787
AAT72378.1 AY657002_p35 hypothetical protein singleton unknown function unknown function 1 30578 30676
AAT72362.1 AY657002_p19 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 17918 18490
AAT72379.1 AY657002_p36 hypothetical protein singleton unknown function unknown function 1 30686 30802
AAT72386.1 AY657002_p43 hypothetical protein singleton unknown function unknown function 1 36455 36658
AAT72375.1 AY657002_p32 DNA methylase phrog_498 DNA methyltransferase other 1 27802 29034
AAT72365.1 AY657002_p22 hypothetical protein phrog_3280 unknown function unknown function -1 19883 20017
AAT72390.1 AY657002_p47 hypothetical protein phrog_88 major tail protein tail 1 37671 38261
AAT72366.1 AY657002_p23 DNA primase phrog_1883 DNA helicase DNA, RNA and nucleotide metabolism 1 20295 22580
AAT72364.1 AY657002_p21 hypothetical protein phrog_408 unknown function unknown function -1 19585 19908
AAT72367.1 AY657002_p24 restriction-modification enzyme phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 22844 23146
AAT72380.1 AY657002_p37 hypothetical protein singleton unknown function unknown function 1 30957 31103
AAT72370.1 AY657002_p27 hypothetical protein phrog_4709 unknown function unknown function 1 25185 25412
AAT72387.1 AY657002_p44 head tail adaptor phrog_25 head closure Hc1 connector 1 36659 36988
AAT72350.1 AY657002_p7 YolD-like protein phrog_16307 unknown function unknown function -1 6475 6843
AAT72348.1 AY657002_p5 Msr(D) phrog_293 ABC transporter moron, auxiliary metabolic gene and host takeover 1 4608 6071
AAT72383.1 AY657002_p40 portal protein phrog_12 portal protein head and packaging 1 33268 34509
AAT72347.1 AY657002_p4 Mef(A) phrog_2034 unknown function unknown function 1 3271 4488
AAT72358.1 AY657002_p15 DNA binding zinc finger domain protein phrog_30403 unknown function unknown function -1 13620 14774
AAT72354.1 AY657002_p11 UmuD MucA-like protein phrog_4 transcriptional repressor transcription regulation -1 8608 9297
AAT72384.1 AY657002_p41 Clp protease phrog_94 head maturation protease head and packaging 1 34502 35188
AAT72399.1 AY657002_p56 resolvase phrog_95 integrase integration and excision 1 48971 50209
AAT72359.1 AY657002_p16 hypothetical protein phrog_2513 unknown function unknown function 1 15120 15689
AAT72361.1 AY657002_p18 hypothetical protein phrog_2442 unknown function unknown function -1 17732 17899
AAT72372.1 AY657002_p29 S-adenosylmethionine synthetase phrog_1569 unknown function unknown function 1 25707 26768
AAT72352.1 AY657002_p9 hypothetical protein phrog_38371 unknown function unknown function -1 8260 8400
AAT72393.1 AY657002_p50 tail tape measure protein phrog_58 tail length tape measure protein tail 1 38856 41975
AAT72346.1 AY657002_p3 hypothetical protein singleton unknown function unknown function 1 2025 2441
AAT72394.1 AY657002_p51 hypothetical protein phrog_33 distal tail protein Dit tail 1 41972 42697
AAT72376.1 AY657002_p33 C-5 cytosine-specific DNA methylase phrog_116 DNA methyltransferase other 1 29031 30197
AAT72400.1 AY657002_p57 resolvase phrog_95 integrase integration and excision 1 50206 51771
AAT72377.1 AY657002_p34 hypothetical protein phrog_3782 unknown function unknown function 1 30313 30573
AAT72385.1 AY657002_p42 capsid protein phrog_10 major head protein head and packaging 1 35204 36391
AAT72369.1 AY657002_p26 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 24496 24999
AAT72353.1 AY657002_p10 hypothetical protein phrog_27023 unknown function unknown function -1 8378 8605
AAT72381.1 AY657002_p38 terminase small subunit phrog_83 terminase small subunit head and packaging 1 31186 31662
AAT72395.1 AY657002_p52 host specificity protein phrog_2189 tail protein tail 1 42682 45585
AAT72392.1 AY657002_p49 hypothetical protein phrog_3033 unknown function unknown function 1 38686 38838
AAT72363.1 AY657002_p20 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 18471 19592