| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY848684 |
Definition |
Enterobacteria phage L17, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus; Pseudomonas virus PRD1. |
DB of origin |
PVOG |
Length |
14935 |
Host Name |
Enterobacteriaceae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
31 |
%GC |
48.25 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAX45533.1 | AY848684_p10 | assembly | phrog_14814 | unknown function | unknown function | 1 | 7021 | 7632 |
| AAX45536.1 | AY848684_p26 | DNA delivery | phrog_15454 | unknown function | unknown function | 1 | 12527 | 12991 |
| AAX45528.1 | AY848684_p22 | hypothetical protein | phrog_18623 | unknown function | unknown function | 1 | 11082 | 11192 |
| AAX45544.1 | AY848684_p15 | DNA packaging | phrog_15626 | unknown function | unknown function | 1 | 9793 | 9936 |
| AAX45555.1 | AY848684_p1 | terminal protein | phrog_15886 | unknown function | unknown function | 1 | 234 | 1013 |
| AAX45545.1 | AY848684_p14 | major capsid protein | phrog_5863 | minor head protein | head and packaging | 1 | 8587 | 9774 |
| AAX45538.1 | AY848684_p24 | hypothetical protein | phrog_15637 | unknown function | unknown function | 1 | 11828 | 12181 |
| AAX45531.1 | AY848684_p16 | hypothetical protein | phrog_16709 | unknown function | unknown function | 1 | 9947 | 10030 |
| AAX45539.1 | AY848684_p7 | assembly | phrog_15795 | unknown function | unknown function | 1 | 6329 | 6580 |
| AAX45550.1 | AY848684_p20 | P34 | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10609 | 10815 |
| AAX45543.1 | AY848684_p13 | DNA packaging | phrog_16195 | unknown function | unknown function | 1 | 8452 | 8580 |
| AAX45556.1 | AY848684_p11 | DNA packaging ATPase | phrog_2666 | terminase large subunit | head and packaging | 1 | 7629 | 8312 |
| AAX45542.1 | AY848684_p4 | receptor binding | phrog_16118 | unknown function | unknown function | 1 | 3129 | 4904 |
| AAX45526.1 | AY848684_p12 | hypothetical protein | phrog_15703 | unknown function | unknown function | 1 | 8324 | 8452 |
| AAX45551.1 | AY848684_p27 | holin | phrog_785 | holin | lysis | 1 | 12988 | 13341 |
| AAX45535.1 | AY848684_p31 | ssDNA binding protein | phrog_14847 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14212 | 14694 |
| AAX45537.1 | AY848684_p3 | muramidase | phrog_2860 | endolysin | head and packaging | 1 | 2680 | 3129 |
| AAX45548.1 | AY848684_p19 | DNA delivery | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10432 | 10596 |
| AAX45532.1 | AY848684_p2 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1017 | 2678 |
| AAX45529.1 | AY848684_p28 | hypothetical protein | phrog_89 | Rz-like spanin | lysis | 1 | 13334 | 13699 |
| AAX45541.1 | AY848684_p30 | ssDNA binding protein | phrog_15890 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13855 | 14139 |
| AAX45549.1 | AY848684_p8 | assembly | phrog_14809 | unknown function | unknown function | 1 | 6570 | 6776 |
| AAX45554.1 | AY848684_p25 | transclycosylase | phrog_13449 | transglycosylase | other | 1 | 12182 | 12991 |
| AAX45530.1 | AY848684_p29 | hypothetical protein | phrog_456 | Rz-like spanin | lysis | 1 | 13620 | 13895 |
| AAX45547.1 | AY848684_p5 | penton | phrog_15879 | unknown function | unknown function | 1 | 4908 | 5288 |
| AAX45540.1 | AY848684_p18 | DNA delivery | phrog_14462 | unknown function | unknown function | 1 | 10160 | 10432 |
| AAX45552.1 | AY848684_p6 | spike | phrog_15674 | major spike protein | head and packaging | 1 | 5288 | 6310 |
| AAX45546.1 | AY848684_p21 | minor capsid protein | phrog_15441 | minor head protein | head and packaging | 1 | 10825 | 11079 |
| AAX45553.1 | AY848684_p9 | minor capsid protein | phrog_15059 | minor head protein | head and packaging | 1 | 6776 | 7276 |
| AAX45527.1 | AY848684_p17 | hypothetical protein | phrog_16332 | unknown function | unknown function | 1 | 10036 | 10158 |
| AAX45534.1 | AY848684_p23 | DNA delivery | phrog_16567 | unknown function | unknown function | 1 | 11194 | 11817 |