| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY848685 |
Definition |
Enterobacteria phage PR3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus; Pseudomonas virus PRD1. |
DB of origin |
PVOG |
Length |
14937 |
Host Name |
Enterobacteriaceae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
31 |
%GC |
48.22 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAX45573.1 | AY848685_p4 | receptor binding | phrog_16118 | unknown function | unknown function | 1 | 3130 | 4905 |
| AAX45560.1 | AY848685_p28 | hypothetical protein | phrog_89 | Rz-like spanin | lysis | 1 | 13335 | 13700 |
| AAX45574.1 | AY848685_p13 | DNA packaging | phrog_16195 | unknown function | unknown function | 1 | 8453 | 8581 |
| AAX45578.1 | AY848685_p5 | penton | phrog_15879 | unknown function | unknown function | 1 | 4909 | 5289 |
| AAX45567.1 | AY848685_p26 | DNA delivery | phrog_15454 | unknown function | unknown function | 1 | 12528 | 12992 |
| AAX45569.1 | AY848685_p24 | hypothetical protein | phrog_15637 | unknown function | unknown function | 1 | 11829 | 12182 |
| AAX45559.1 | AY848685_p22 | hypothetical protein | phrog_18623 | unknown function | unknown function | 1 | 11083 | 11193 |
| AAX45586.1 | AY848685_p1 | terminal protein | phrog_15886 | unknown function | unknown function | 1 | 235 | 1014 |
| AAX45581.1 | AY848685_p20 | P34 | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10610 | 10816 |
| AAX45576.1 | AY848685_p14 | major capsid protein | phrog_5863 | minor head protein | head and packaging | 1 | 8588 | 9775 |
| AAX45583.1 | AY848685_p6 | spike | phrog_15674 | major spike protein | head and packaging | 1 | 5289 | 6311 |
| AAX45579.1 | AY848685_p19 | DNA delivery | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10433 | 10597 |
| AAX45577.1 | AY848685_p21 | minor capsid protein | phrog_15441 | minor head protein | head and packaging | 1 | 10826 | 11080 |
| AAX45580.1 | AY848685_p8 | assembly | phrog_14809 | unknown function | unknown function | 1 | 6571 | 6777 |
| AAX45566.1 | AY848685_p31 | ssDNA binding protein | phrog_14847 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14213 | 14695 |
| AAX45557.1 | AY848685_p12 | hypothetical protein | phrog_15703 | unknown function | unknown function | 1 | 8325 | 8453 |
| AAX45563.1 | AY848685_p2 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1018 | 2679 |
| AAX45570.1 | AY848685_p7 | assembly | phrog_15795 | unknown function | unknown function | 1 | 6330 | 6581 |
| AAX45571.1 | AY848685_p18 | DNA delivery | phrog_14462 | unknown function | unknown function | 1 | 10161 | 10433 |
| AAX45572.1 | AY848685_p30 | ssDNA binding protein | phrog_15890 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13856 | 14140 |
| AAX45582.1 | AY848685_p27 | holin | phrog_785 | holin | lysis | 1 | 12989 | 13342 |
| AAX45562.1 | AY848685_p16 | hypothetical protein | phrog_16709 | unknown function | unknown function | 1 | 9948 | 10031 |
| AAX45561.1 | AY848685_p29 | hypothetical protein | phrog_456 | Rz-like spanin | lysis | 1 | 13621 | 13896 |
| AAX45585.1 | AY848685_p25 | transclycosylase | phrog_13449 | transglycosylase | other | 1 | 12183 | 12992 |
| AAX45558.1 | AY848685_p17 | hypothetical protein | phrog_16332 | unknown function | unknown function | 1 | 10037 | 10159 |
| AAX45584.1 | AY848685_p9 | minor capsid protein | phrog_15059 | minor head protein | head and packaging | 1 | 6777 | 7277 |
| AAX45564.1 | AY848685_p10 | assembly | phrog_14814 | unknown function | unknown function | 1 | 7022 | 7633 |
| AAX45565.1 | AY848685_p23 | DNA delivery | phrog_16567 | unknown function | unknown function | 1 | 11195 | 11818 |
| AAX45575.1 | AY848685_p15 | DNA packaging | phrog_15626 | unknown function | unknown function | 1 | 9794 | 9937 |
| AAX45568.1 | AY848685_p3 | muramidase | phrog_2860 | endolysin | head and packaging | 1 | 2681 | 3130 |
| AAX45587.1 | AY848685_p11 | DNA packaging ATPase | phrog_2666 | terminase large subunit | head and packaging | 1 | 7630 | 8313 |