| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY848686 |
Definition |
Enterobacteria phage PR4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus; Pseudomonas virus PR4. |
DB of origin |
PVOG |
Length |
14954 |
Host Name |
Enterobacteriaceae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
31 |
%GC |
48.32 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAX45592.1 | AY848686_p29 | hypothetical protein | phrog_456 | Rz-like spanin | lysis | 1 | 13644 | 13916 |
| AAX45610.1 | AY848686_p19 | DNA delivery | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10456 | 10620 |
| AAX45595.1 | AY848686_p10 | assembly | phrog_14814 | unknown function | unknown function | 1 | 7045 | 7656 |
| AAX45602.1 | AY848686_p18 | DNA delivery | phrog_14462 | unknown function | unknown function | 1 | 10184 | 10456 |
| AAX45601.1 | AY848686_p7 | assembly | phrog_15795 | unknown function | unknown function | 1 | 6344 | 6604 |
| AAX45596.1 | AY848686_p23 | DNA delivery | phrog_16567 | unknown function | unknown function | 1 | 11218 | 11841 |
| AAX45616.1 | AY848686_p25 | transclycosylase | phrog_13449 | transglycosylase | other | 1 | 12206 | 13015 |
| AAX45589.1 | AY848686_p17 | hypothetical protein | phrog_16332 | unknown function | unknown function | 1 | 10060 | 10182 |
| AAX45615.1 | AY848686_p9 | minor capsid protein | phrog_15059 | minor head protein | head and packaging | 1 | 6800 | 7300 |
| AAX45603.1 | AY848686_p30 | ssDNA binding protein | phrog_15890 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13876 | 14160 |
| AAX45612.1 | AY848686_p20 | P34 | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10633 | 10839 |
| AAX45614.1 | AY848686_p6 | spike | phrog_15674 | major spike protein | head and packaging | 1 | 5303 | 6325 |
| AAX45618.1 | AY848686_p11 | DNA packaging ATPase | phrog_2666 | terminase large subunit | head and packaging | 1 | 7653 | 8336 |
| AAX45594.1 | AY848686_p2 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1017 | 2678 |
| AAX45590.1 | AY848686_p22 | hypothetical protein | phrog_18623 | unknown function | unknown function | 1 | 11106 | 11216 |
| AAX45600.1 | AY848686_p24 | hypothetical protein | phrog_15637 | unknown function | unknown function | 1 | 11852 | 12205 |
| AAX45598.1 | AY848686_p26 | DNA delivery | phrog_15454 | unknown function | unknown function | 1 | 12551 | 13015 |
| AAX45604.1 | AY848686_p4 | receptor binding | phrog_16118 | unknown function | unknown function | 1 | 3129 | 4919 |
| AAX45608.1 | AY848686_p21 | minor capsid protein | phrog_15441 | minor head protein | head and packaging | 1 | 10849 | 11103 |
| AAX45606.1 | AY848686_p15 | DNA packaging | phrog_15626 | unknown function | unknown function | 1 | 9817 | 9960 |
| AAX45597.1 | AY848686_p31 | ssDNA binding protein | phrog_14847 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14233 | 14712 |
| AAX45609.1 | AY848686_p5 | penton | phrog_15879 | unknown function | unknown function | 1 | 4923 | 5303 |
| AAX45605.1 | AY848686_p13 | DNA packaging | phrog_16195 | unknown function | unknown function | 1 | 8476 | 8604 |
| AAX45591.1 | AY848686_p28 | hypothetical protein | phrog_89 | Rz-like spanin | lysis | 1 | 13358 | 13720 |
| AAX45613.1 | AY848686_p27 | holin | phrog_785 | holin | lysis | 1 | 13012 | 13365 |
| AAX45617.1 | AY848686_p1 | terminal protein | phrog_15886 | unknown function | unknown function | 1 | 234 | 1013 |
| AAX45599.1 | AY848686_p3 | muramidase | phrog_2860 | endolysin | head and packaging | 1 | 2680 | 3129 |
| AAX45607.1 | AY848686_p14 | major capsid protein | phrog_5863 | minor head protein | head and packaging | 1 | 8611 | 9798 |
| AAX45588.1 | AY848686_p12 | hypothetical protein | phrog_15703 | unknown function | unknown function | 1 | 8348 | 8476 |
| AAX45611.1 | AY848686_p8 | assembly | phrog_14809 | unknown function | unknown function | 1 | 6594 | 6800 |
| AAX45593.1 | AY848686_p16 | hypothetical protein | phrog_16709 | unknown function | unknown function | 1 | 9971 | 10054 |