| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
AY848687 |
Definition |
Enterobacteria phage PR5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus; Pseudomonas virus PRD1. |
DB of origin |
PVOG |
Length |
14939 |
Host Name |
Enterobacteriaceae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
31 |
%GC |
48.18 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AAX45622.1 | AY848687_p28 | hypothetical protein | phrog_89 | Rz-like spanin | lysis | 1 | 13342 | 13704 |
| AAX45634.1 | AY848687_p30 | ssDNA binding protein | phrog_15890 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13860 | 14144 |
| AAX45638.1 | AY848687_p14 | major capsid protein | phrog_5863 | minor head protein | head and packaging | 1 | 8595 | 9782 |
| AAX45625.1 | AY848687_p2 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1016 | 2677 |
| AAX45647.1 | AY848687_p25 | transclycosylase | phrog_13449 | transglycosylase | other | 1 | 12190 | 12999 |
| AAX45644.1 | AY848687_p27 | holin | phrog_785 | holin | lysis | 1 | 12996 | 13349 |
| AAX45628.1 | AY848687_p31 | ssDNA binding protein | phrog_14847 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14217 | 14699 |
| AAX45640.1 | AY848687_p5 | penton | phrog_15879 | unknown function | unknown function | 1 | 4907 | 5287 |
| AAX45639.1 | AY848687_p21 | minor capsid protein | phrog_15441 | minor head protein | head and packaging | 1 | 10833 | 11087 |
| AAX45631.1 | AY848687_p24 | hypothetical protein | phrog_15637 | unknown function | unknown function | 1 | 11836 | 12189 |
| AAX45623.1 | AY848687_p29 | hypothetical protein | phrog_456 | Rz-like spanin | lysis | 1 | 13628 | 13900 |
| AAX45643.1 | AY848687_p20 | P34 | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10617 | 10823 |
| AAX45636.1 | AY848687_p13 | DNA packaging | phrog_16195 | unknown function | unknown function | 1 | 8460 | 8588 |
| AAX45646.1 | AY848687_p9 | minor capsid protein | phrog_15059 | minor head protein | head and packaging | 1 | 6784 | 7284 |
| AAX45642.1 | AY848687_p8 | assembly | phrog_14809 | unknown function | unknown function | 1 | 6578 | 6784 |
| AAX45621.1 | AY848687_p22 | hypothetical protein | phrog_18623 | unknown function | unknown function | 1 | 11090 | 11200 |
| AAX45632.1 | AY848687_p7 | assembly | phrog_15795 | unknown function | unknown function | 1 | 6328 | 6588 |
| AAX45627.1 | AY848687_p23 | DNA delivery | phrog_16567 | unknown function | unknown function | 1 | 11202 | 11825 |
| AAX45620.1 | AY848687_p17 | hypothetical protein | phrog_16332 | unknown function | unknown function | 1 | 10044 | 10166 |
| AAX45626.1 | AY848687_p10 | assembly | phrog_14814 | unknown function | unknown function | 1 | 7029 | 7640 |
| AAX45648.1 | AY848687_p1 | terminal protein | phrog_15886 | unknown function | unknown function | 1 | 233 | 1012 |
| AAX45633.1 | AY848687_p18 | DNA delivery | phrog_14462 | unknown function | unknown function | 1 | 10168 | 10440 |
| AAX45630.1 | AY848687_p3 | muramidase | phrog_2860 | endolysin | head and packaging | 1 | 2679 | 3128 |
| AAX45629.1 | AY848687_p26 | DNA delivery | phrog_15454 | unknown function | unknown function | 1 | 12535 | 12999 |
| AAX45624.1 | AY848687_p16 | hypothetical protein | phrog_16709 | unknown function | unknown function | 1 | 9955 | 10038 |
| AAX45645.1 | AY848687_p6 | spike | phrog_15674 | major spike protein | head and packaging | 1 | 5287 | 6309 |
| AAX45641.1 | AY848687_p19 | DNA delivery | phrog_8052 | membrane DNA delivery | moron, auxiliary metabolic gene and host takeover | 1 | 10440 | 10604 |
| AAX45619.1 | AY848687_p12 | hypothetical protein | phrog_15703 | unknown function | unknown function | 1 | 8332 | 8460 |
| AAX45635.1 | AY848687_p4 | receptor binding | phrog_16118 | unknown function | unknown function | 1 | 3128 | 4903 |
| AAX45649.1 | AY848687_p11 | DNA packaging ATPase | phrog_2666 | terminase large subunit | head and packaging | 1 | 7637 | 8320 |
| AAX45637.1 | AY848687_p15 | DNA packaging | phrog_15626 | unknown function | unknown function | 1 | 9801 | 9944 |