| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
CP003412 |
Definition |
Natrinema SNJ2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Monodnaviria; Trapavirae; Saleviricota; Huolimaviricetes; Haloruvirales; Pleolipoviridae. |
DB of origin |
NUCCORE |
Length |
16992 |
Host Name |
Natrinema |
Host domain |
Archaea |
Is prophage? |
undef |
Number of proteins |
25 |
%GC |
59.13 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFO55980.2 | CP003412_p14 | hypothetical protein | phrog_1938 | unknown function | unknown function | 1 | 9143 | 9712 |
| AFO55970.1 | CP003412_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16261 | 16593 |
| AFO55971.1 | CP003412_p23 | hypothetical protein | phrog_4152 | unknown function | unknown function | -1 | 16145 | 16264 |
| AFO55976.1 | CP003412_p18 | hypothetical protein | phrog_2095 | unknown function | unknown function | 1 | 12297 | 12680 |
| AFO55972.1 | CP003412_p22 | hypothetical protein | phrog_2095 | unknown function | unknown function | -1 | 15627 | 16148 |
| AFO55975.1 | CP003412_p19 | hypothetical protein | phrog_3288 | transcriptional regulator | transcription regulation | -1 | 12951 | 14930 |
| AFO55978.1 | CP003412_p16 | hypothetical protein | phrog_9260 | unknown function | unknown function | 1 | 10539 | 10856 |
| AFO55974.1 | CP003412_p20 | hypothetical protein | phrog_24778 | unknown function | unknown function | -1 | 14891 | 15091 |
| AFO55981.1 | CP003412_p13 | hypothetical protein | phrog_2231 | unknown function | unknown function | 1 | 7515 | 9140 |
| AFO55984.1 | CP003412_p10 | hypothetical protein | phrog_16897 | unknown function | unknown function | 1 | 5587 | 6051 |
| AFO55973.1 | CP003412_p21 | hypothetical protein | phrog_2450 | unknown function | unknown function | -1 | 15094 | 15630 |
| AFO55985.1 | CP003412_p9 | hypothetical protein | phrog_14115 | unknown function | unknown function | -1 | 4474 | 5262 |
| AFO55992.1 | CP003412_p1 | phage integrase/site-specific recombinase | phrog_1 | integrase | integration and excision | -1 | 63 | 1112 |
| AFO55986.1 | CP003412_p8 | orc1/cdc6 family replication initiation protein | phrog_168 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 3349 | 4359 |
| AFO55982.1 | CP003412_p12 | hypothetical protein | phrog_3232 | unknown function | unknown function | 1 | 7041 | 7433 |
| AFO55990.1 | CP003412_p3 | transcriptional regulator PadR family protein | phrog_4278 | unknown function | unknown function | -1 | 1421 | 1846 |
| AFO55969.1 | CP003412_p25 | hypothetical protein | phrog_7550 | unknown function | unknown function | -1 | 16586 | 16825 |
| AFO55983.1 | CP003412_p11 | hypothetical protein | phrog_6313 | unknown function | unknown function | -1 | 6750 | 6935 |
| AFO55989.1 | CP003412_p5 | hypothetical protein | phrog_13047 | unknown function | unknown function | 1 | 2414 | 2671 |
| AFO55988.1 | CP003412_p6 | YcfA family protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 2672 | 2923 |
| AFO55979.1 | CP003412_p15 | hypothetical protein | phrog_3526 | unknown function | unknown function | 1 | 9709 | 10542 |
| AFO55987.1 | CP003412_p7 | hypothetical protein | phrog_18711 | unknown function | unknown function | -1 | 2926 | 3165 |
| CP003412_p4 | CP003412_p4 | hypothetical protein | phrog_2440 | transcriptional regulator | transcription regulation | 1 | 2081 | 2347 |
| AFO55991.1 | CP003412_p2 | hypothetical protein | phrog_21306 | unknown function | unknown function | -1 | 1093 | 1428 |
| AFO55977.1 | CP003412_p17 | hypothetical protein | phrog_1979 | unknown function | unknown function | 1 | 10849 | 12027 |