Genomic map of Streptococcus phage MM1 1998 (DQ113772)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
DQ113772
Definition
Streptococcus pneumoniae bacteriophage MM1 1998, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
38893
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
38.1
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AAZ82421.1 DQ113772_p10 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5019 5726
AAZ82437.1 DQ113772_p26 hypothetical protein phrog_98 unknown function unknown function 1 12291 12638
AAZ82435.1 DQ113772_p24 hypothetical protein phrog_2003 unknown function unknown function 1 11816 12103
AAZ82443.1 DQ113772_p32 terminase large subunit phrog_2 terminase large subunit head and packaging 1 15994 17304
AAZ82446.1 DQ113772_p35 minor capsid protein phrog_581 minor head protein head and packaging 1 19088 20239
AAZ82452.1 DQ113772_p41 minor capsid protein phrog_556 minor head protein head and packaging 1 22880 23224
AAZ82456.1 DQ113772_p45 hypothetical protein phrog_706 unknown function unknown function 1 24643 25212
AAZ82424.1 DQ113772_p13 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 6909 7454
AAZ82412.1 DQ113772_p1 integrase phrog_1 integrase integration and excision -1 103 1230
AAZ82444.1 DQ113772_p33 minor capsid protein phrog_533 portal protein head and packaging 1 17317 18885
AAZ82455.1 DQ113772_p44 hypothetical protein phrog_1061 unknown function unknown function 1 24142 24630
AAZ82434.1 DQ113772_p23 hypothetical protein phrog_121 unknown function unknown function 1 11319 11816
AAZ82453.1 DQ113772_p42 minor capsid protein phrog_913 minor head protein head and packaging 1 23224 23631
AAZ82428.1 DQ113772_p17 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 8929 9363
AAZ82448.1 DQ113772_p37 minor capsid protein phrog_840 major head protein head and packaging 1 20959 21840
AAZ82457.1 DQ113772_p46 minor tail protein, tape measure protein phrog_1686 tail length tape measure protein tail 1 25205 28486
AAZ82441.1 DQ113772_p30 hypothetical protein phrog_5057 unknown function unknown function 1 14599 15345
AAZ82433.1 DQ113772_p22 hypothetical protein phrog_834 unknown function unknown function 1 11000 11317
AAZ82438.1 DQ113772_p27 hypothetical protein phrog_236 nucleotide kinase other 1 12827 13069
AAZ82440.1 DQ113772_p29 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 13524 14618
AAZ82419.1 DQ113772_p8 hypothetical protein phrog_13947 unknown function unknown function 1 3985 4509
AAZ82459.1 DQ113772_p48 antireceptor phrog_588 tail fiber protein and host specificity tail 1 29999 34555
AAZ82454.1 DQ113772_p43 tail shaft protein phrog_820 major tail protein tail 1 23628 24077
AAZ82431.1 DQ113772_p20 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10342 10743
AAZ82427.1 DQ113772_p16 hypothetical protein phrog_3947 unknown function unknown function 1 8672 8875
AAZ82422.1 DQ113772_p11 DNA-binding protein phrog_674 unknown function unknown function 1 5729 6721
AAZ82429.1 DQ113772_p18 hypothetical protein phrog_1029 unknown function unknown function 1 9365 10102
AAZ82458.1 DQ113772_p47 minor structural protein phrog_202 distal tail protein Dit tail 1 28483 29997
AAZ82451.1 DQ113772_p40 minor capsid protein phrog_793 head-tail adaptor connector 1 22509 22880
AAZ82439.1 DQ113772_p28 hypothetical protein phrog_3511 unknown function unknown function 1 13066 13458
AAZ82450.1 DQ113772_p39 hypothetical protein phrog_541 head-tail adaptor connector 1 22127 22519
AAZ82445.1 DQ113772_p34 hypothetical protein phrog_3755 unknown function unknown function 1 18818 19045
AAZ82420.1 DQ113772_p9 hypothetical protein phrog_2715 unknown function unknown function 1 4537 5013
AAZ82425.1 DQ113772_p14 C5 methyltransferase alpha subunit phrog_116 DNA methyltransferase other 1 7480 8637
AAZ82430.1 DQ113772_p19 hypothetical protein phrog_774 unknown function unknown function 1 10119 10331
AAZ82460.1 DQ113772_p49 minor tail protein phrog_372 tail protein tail 1 34566 36644
AAZ82417.1 DQ113772_p6 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 3140 3406
AAZ82414.1 DQ113772_p3 hypothetical protein phrog_87 metallo-protease other -1 1713 2093
AAZ82436.1 DQ113772_p25 hypothetical protein phrog_4667 unknown function unknown function 1 12103 12276
AAZ82426.1 DQ113772_p15 C5 methyltransferase beta subunit phrog_16143 DNA methyltransferase other 1 7631 8056
AAZ82423.1 DQ113772_p12 hypothetical protein phrog_4139 unknown function unknown function 1 6743 6919
AAZ82418.1 DQ113772_p7 hypothetical protein phrog_2273 unknown function unknown function 1 3638 3904
AAZ82461.1 DQ113772_p50 hypothetical protein phrog_2566 unknown function unknown function 1 36698 36967
AAZ82416.1 DQ113772_p5 repressor protein phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 1 2774 2965
AAZ82432.1 DQ113772_p21 hypothetical protein phrog_4706 unknown function unknown function 1 10745 10951
AAZ82442.1 DQ113772_p31 hypothetical protein phrog_2412 unknown function unknown function 1 15549 16004
AAZ82413.1 DQ113772_p2 hypothetical protein phrog_9859 unknown function unknown function -1 1349 1699
AAZ82415.1 DQ113772_p4 phage repressor protein phrog_8 transcriptional regulator transcription regulation -1 2115 2477
AAZ82447.1 DQ113772_p36 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 20378 20941
AAZ82449.1 DQ113772_p38 hypothetical protein phrog_2910 unknown function unknown function 1 21851 22084
AAZ82464.1 DQ113772_p53 lytic amidase phrog_1110 endolysin lysis 1 37733 38689
AAZ82463.1 DQ113772_p52 holin phrog_608 holin lysis 1 37397 37729
AAZ82462.1 DQ113772_p51 holin phrog_199 holin lysis 1 36977 37393