| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
DQ289556 |
Definition |
Bacillus anthracis phage Gamma isolate d'Herelle, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wbetavirus; unclassified Wbetavirus. |
DB of origin |
PVOG |
Length |
37373 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.12 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABC40463.1 | DQ289556_p11 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 7432 | 7749 |
| ABC40467.1 | DQ289556_p15 | minor structural protein | phrog_1775 | minor head protein | head and packaging | 1 | 13325 | 17320 |
| ABC40458.1 | DQ289556_p6 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5374 | 5664 |
| ABC40476.1 | DQ289556_p24 | phage regulatory protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 21802 | 22038 |
| ABC40459.1 | DQ289556_p7 | head-tail adaptor protein | phrog_25 | head closure Hc1 | connector | 1 | 5661 | 5984 |
| ABC40496.1 | DQ289556_p44 | hypothetical protein | phrog_1235 | unknown function | unknown function | 1 | 33660 | 33899 |
| ABC40487.1 | DQ289556_p35 | hypothetical protein | phrog_8412 | unknown function | unknown function | 1 | 29208 | 29441 |
| ABC40456.1 | DQ289556_p4 | Caudovirales phage prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3519 | 4139 |
| ABC40469.1 | DQ289556_p17 | phage lysin N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 17784 | 18485 |
| ABC40480.1 | DQ289556_p28 | phage repressor fragment | phrog_37093 | transcriptional regulator | transcription regulation | -1 | 24693 | 24821 |
| ABC40460.1 | DQ289556_p8 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5977 | 6417 |
| ABC40453.1 | DQ289556_p1 | phage terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 63 | 548 |
| ABC40491.1 | DQ289556_p39 | permease | phrog_6214 | unknown function | unknown function | 1 | 31279 | 31509 |
| ABC40462.1 | DQ289556_p10 | major tail protein | phrog_88 | major tail protein | tail | 1 | 6774 | 7382 |
| ABC40481.1 | DQ289556_p29 | helix-turn-helix Cro and cI family protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 24981 | 25208 |
| ABC40471.1 | DQ289556_p19 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 19027 | 19239 |
| ABC40492.1 | DQ289556_p40 | hypothetical protein | phrog_1672 | unknown function | unknown function | 1 | 31616 | 32086 |
| ABC40465.1 | DQ289556_p13 | phage tail tape measure protein | phrog_1533 | tail length tape measure protein | tail | 1 | 7972 | 11823 |
| ABC40503.1 | DQ289556_p51 | hypothetical protein | phrog_9119 | unknown function | unknown function | 1 | 36493 | 36684 |
| ABC40475.1 | DQ289556_p23 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21136 | 21768 |
| ABC40482.1 | DQ289556_p30 | hypothetical protein | phrog_14915 | unknown function | unknown function | 1 | 25221 | 25406 |
| ABC40455.1 | DQ289556_p3 | phage portal protein | phrog_12 | portal protein | head and packaging | 1 | 2258 | 3556 |
| ABC40504.1 | DQ289556_p52 | hypothetical protein | phrog_4705 | unknown function | unknown function | 1 | 36665 | 36952 |
| ABC40486.1 | DQ289556_p34 | DnaC protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 28278 | 29189 |
| ABC40474.1 | DQ289556_p22 | FtsK/SpoIIIE family protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 19920 | 21209 |
| ABC40454.1 | DQ289556_p2 | phage terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 545 | 2242 |
| ABC40468.1 | DQ289556_p16 | phage holin | phrog_199 | holin | lysis | 1 | 17359 | 17784 |
| ABC40497.1 | DQ289556_p45 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34336 | 34743 |
| ABC40493.1 | DQ289556_p41 | fosfomycin resistance protein | phrog_34466 | unknown function | unknown function | -1 | 32133 | 32522 |
| ABC40484.1 | DQ289556_p32 | hypothetical protein | phrog_6329 | unknown function | unknown function | 1 | 26533 | 27186 |
| ABC40483.1 | DQ289556_p31 | antirepressor | phrog_463 | anti-repressor | transcription regulation | 1 | 25651 | 26466 |
| ABC40488.1 | DQ289556_p36 | RNA polymerase sigma subunit | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 29434 | 30180 |
| ABC40502.1 | DQ289556_p50 | hypothetical protein | phrog_1315 | unknown function | unknown function | 1 | 36040 | 36294 |
| ABC40466.1 | DQ289556_p14 | phage tail fiber protein | phrog_202 | distal tail protein Dit | tail | 1 | 11838 | 13328 |
| ABC40457.1 | DQ289556_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4178 | 5356 |
| ABC40485.1 | DQ289556_p33 | phage replisome organizer protein | phrog_1701 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 27315 | 28262 |
| ABC40477.1 | DQ289556_p25 | hypothetical protein | phrog_34023 | unknown function | unknown function | 1 | 21872 | 22099 |
| ABC40473.1 | DQ289556_p21 | hypothetical protein | phrog_5703 | unknown function | unknown function | 1 | 19728 | 19910 |
| ABC40501.1 | DQ289556_p49 | hypothetical protein | phrog_11511 | unknown function | unknown function | 1 | 35829 | 36020 |
| ABC40479.1 | DQ289556_p27 | site-specific phage recombinase | phrog_95 | integrase | integration and excision | 1 | 23245 | 24690 |
| ABC40472.1 | DQ289556_p20 | hypothetical protein | phrog_4616 | unknown function | unknown function | 1 | 19423 | 19731 |
| ABC40464.1 | DQ289556_p12 | hypothetical protein | phrog_8548 | unknown function | unknown function | 1 | 7779 | 7955 |
| ABC40489.1 | DQ289556_p37 | hypothetical protein | phrog_8281 | unknown function | unknown function | 1 | 30177 | 30653 |
| ABC40478.1 | DQ289556_p26 | hypothetical protein | phrog_1835 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 22306 | 23169 |
| ABC40505.1 | DQ289556_p53 | phage endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36952 | 37335 |
| ABC40498.1 | DQ289556_p46 | hypothetical protein | phrog_10998 | unknown function | unknown function | 1 | 34863 | 35087 |
| ABC40494.1 | DQ289556_p42 | hypothetical protein | phrog_18684 | unknown function | unknown function | 1 | 33003 | 33173 |
| ABC40461.1 | DQ289556_p9 | conserved structural protein | phrog_78 | tail terminator | connector | 1 | 6414 | 6773 |
| ABC40500.1 | DQ289556_p48 | hypothetical protein | phrog_9442 | unknown function | unknown function | 1 | 35320 | 35724 |
| ABC40490.1 | DQ289556_p38 | hypothetical protein | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 30713 | 31255 |
| ABC40495.1 | DQ289556_p43 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 33362 | 33667 |
| ABC40470.1 | DQ289556_p18 | hypothetical protein | phrog_9170 | unknown function | unknown function | -1 | 18543 | 19040 |
| ABC40499.1 | DQ289556_p47 | hypothetical protein | phrog_2395 | unknown function | unknown function | 1 | 35094 | 35315 |