Genomic map of Bacillus phage Gamma isolate d'Herelle (DQ289556)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
DQ289556
Definition
Bacillus anthracis phage Gamma isolate d'Herelle, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wbetavirus; unclassified Wbetavirus.
DB of origin
PVOG
Length
37373
Host Name
Bacillus cereus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
35.12
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ABC40463.1 DQ289556_p11 hypothetical protein phrog_187 head-tail adaptor connector 1 7432 7749
ABC40467.1 DQ289556_p15 minor structural protein phrog_1775 minor head protein head and packaging 1 13325 17320
ABC40458.1 DQ289556_p6 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5374 5664
ABC40476.1 DQ289556_p24 phage regulatory protein phrog_3 transcriptional repressor transcription regulation -1 21802 22038
ABC40459.1 DQ289556_p7 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 5661 5984
ABC40496.1 DQ289556_p44 hypothetical protein phrog_1235 unknown function unknown function 1 33660 33899
ABC40487.1 DQ289556_p35 hypothetical protein phrog_8412 unknown function unknown function 1 29208 29441
ABC40456.1 DQ289556_p4 Caudovirales phage prohead protease phrog_80 head maturation protease head and packaging 1 3519 4139
ABC40469.1 DQ289556_p17 phage lysin N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 17784 18485
ABC40480.1 DQ289556_p28 phage repressor fragment phrog_37093 transcriptional regulator transcription regulation -1 24693 24821
ABC40460.1 DQ289556_p8 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5977 6417
ABC40453.1 DQ289556_p1 phage terminase small subunit phrog_83 terminase small subunit head and packaging 1 63 548
ABC40491.1 DQ289556_p39 permease phrog_6214 unknown function unknown function 1 31279 31509
ABC40462.1 DQ289556_p10 major tail protein phrog_88 major tail protein tail 1 6774 7382
ABC40481.1 DQ289556_p29 helix-turn-helix Cro and cI family protein phrog_3 transcriptional repressor transcription regulation 1 24981 25208
ABC40471.1 DQ289556_p19 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 19027 19239
ABC40492.1 DQ289556_p40 hypothetical protein phrog_1672 unknown function unknown function 1 31616 32086
ABC40465.1 DQ289556_p13 phage tail tape measure protein phrog_1533 tail length tape measure protein tail 1 7972 11823
ABC40503.1 DQ289556_p51 hypothetical protein phrog_9119 unknown function unknown function 1 36493 36684
ABC40475.1 DQ289556_p23 hypothetical protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 21136 21768
ABC40482.1 DQ289556_p30 hypothetical protein phrog_14915 unknown function unknown function 1 25221 25406
ABC40455.1 DQ289556_p3 phage portal protein phrog_12 portal protein head and packaging 1 2258 3556
ABC40504.1 DQ289556_p52 hypothetical protein phrog_4705 unknown function unknown function 1 36665 36952
ABC40486.1 DQ289556_p34 DnaC protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 28278 29189
ABC40474.1 DQ289556_p22 FtsK/SpoIIIE family protein phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 19920 21209
ABC40454.1 DQ289556_p2 phage terminase large subunit phrog_9 terminase large subunit head and packaging 1 545 2242
ABC40468.1 DQ289556_p16 phage holin phrog_199 holin lysis 1 17359 17784
ABC40497.1 DQ289556_p45 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 34336 34743
ABC40493.1 DQ289556_p41 fosfomycin resistance protein phrog_34466 unknown function unknown function -1 32133 32522
ABC40484.1 DQ289556_p32 hypothetical protein phrog_6329 unknown function unknown function 1 26533 27186
ABC40483.1 DQ289556_p31 antirepressor phrog_463 anti-repressor transcription regulation 1 25651 26466
ABC40488.1 DQ289556_p36 RNA polymerase sigma subunit phrog_351 RNA polymerase sigma factor transcription regulation 1 29434 30180
ABC40502.1 DQ289556_p50 hypothetical protein phrog_1315 unknown function unknown function 1 36040 36294
ABC40466.1 DQ289556_p14 phage tail fiber protein phrog_202 distal tail protein Dit tail 1 11838 13328
ABC40457.1 DQ289556_p5 major capsid protein phrog_10 major head protein head and packaging 1 4178 5356
ABC40485.1 DQ289556_p33 phage replisome organizer protein phrog_1701 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 27315 28262
ABC40477.1 DQ289556_p25 hypothetical protein phrog_34023 unknown function unknown function 1 21872 22099
ABC40473.1 DQ289556_p21 hypothetical protein phrog_5703 unknown function unknown function 1 19728 19910
ABC40501.1 DQ289556_p49 hypothetical protein phrog_11511 unknown function unknown function 1 35829 36020
ABC40479.1 DQ289556_p27 site-specific phage recombinase phrog_95 integrase integration and excision 1 23245 24690
ABC40472.1 DQ289556_p20 hypothetical protein phrog_4616 unknown function unknown function 1 19423 19731
ABC40464.1 DQ289556_p12 hypothetical protein phrog_8548 unknown function unknown function 1 7779 7955
ABC40489.1 DQ289556_p37 hypothetical protein phrog_8281 unknown function unknown function 1 30177 30653
ABC40478.1 DQ289556_p26 hypothetical protein phrog_1835 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 22306 23169
ABC40505.1 DQ289556_p53 phage endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36952 37335
ABC40498.1 DQ289556_p46 hypothetical protein phrog_10998 unknown function unknown function 1 34863 35087
ABC40494.1 DQ289556_p42 hypothetical protein phrog_18684 unknown function unknown function 1 33003 33173
ABC40461.1 DQ289556_p9 conserved structural protein phrog_78 tail terminator connector 1 6414 6773
ABC40500.1 DQ289556_p48 hypothetical protein phrog_9442 unknown function unknown function 1 35320 35724
ABC40490.1 DQ289556_p38 hypothetical protein phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 30713 31255
ABC40495.1 DQ289556_p43 hypothetical protein phrog_2275 unknown function unknown function 1 33362 33667
ABC40470.1 DQ289556_p18 hypothetical protein phrog_9170 unknown function unknown function -1 18543 19040
ABC40499.1 DQ289556_p47 hypothetical protein phrog_2395 unknown function unknown function 1 35094 35315