| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
DQ394806 |
Definition |
Lactococcus phage ul36.k1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
37131 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
35.7 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ABD63668.1 | DQ394806_p34 | unknown | phrog_26874 | unknown function | unknown function | 1 | 16440 | 16613 |
| ABD63684.1 | DQ394806_p49 | unknown | phrog_183 | tail chaperone protein | tail | 1 | 25992 | 26342 |
| ABD63682.1 | DQ394806_p47 | unknown | phrog_176 | tail terminator | connector | 1 | 24979 | 25368 |
| ABD63638.1 | DQ394806_p3 | unknown | phrog_17949 | unknown function | unknown function | -1 | 2118 | 3185 |
| ABD63673.1 | DQ394806_p39 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 20548 | 21588 |
| ABD63640.1 | DQ394806_p5 | cI-like repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3843 | 4370 |
| ABD63639.1 | DQ394806_p4 | unknown | phrog_87 | metallo-protease | other | -1 | 3246 | 3833 |
| ABD63637.1 | DQ394806_p2 | unknown | phrog_7115 | unknown function | unknown function | -1 | 1701 | 2075 |
| ABD63663.1 | DQ394806_p29 | unknown | phrog_7406 | unknown function | unknown function | 1 | 14851 | 15069 |
| ABD63677.1 | DQ394806_p42 | scaffolding protein | phrog_2932 | head scaffolding protein | head and packaging | 1 | 22271 | 22867 |
| ABD63659.1 | DQ394806_p25 | unknown | phrog_6209 | unknown function | unknown function | 1 | 13230 | 13586 |
| ABD63653.1 | DQ394806_p19 | unknown | phrog_5080 | unknown function | unknown function | 1 | 11413 | 11619 |
| ABD63678.1 | DQ394806_p43 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 22885 | 23748 |
| ABD63679.1 | DQ394806_p44 | unknown | phrog_132 | head-tail adaptor | connector | 1 | 24019 | 24351 |
| ABD63646.1 | DQ394806_p12 | unknown | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 6857 | 7030 |
| ABL67433.1 | DQ394806_p9 | unknown | phrog_7263 | unknown function | unknown function | 1 | 6021 | 6254 |
| ABD63691.1 | DQ394806_p56 | base plate protein | phrog_35784 | baseplate protein | tail | 1 | 34310 | 34807 |
| ABD63656.1 | DQ394806_p22 | unknown | phrog_5602 | unknown function | unknown function | 1 | 12010 | 12162 |
| ABD63651.1 | DQ394806_p17 | RusA-like resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10671 | 11060 |
| ABD63654.1 | DQ394806_p20 | unknown | phrog_7446 | unknown function | unknown function | 1 | 11628 | 11798 |
| ABD63644.1 | DQ394806_p10 | unknown | phrog_6258 | unknown function | unknown function | -1 | 6209 | 6487 |
| ABD63661.1 | DQ394806_p27 | unknown | phrog_3808 | unknown function | unknown function | 1 | 13763 | 14125 |
| ABD63647.1 | DQ394806_p13 | sak | phrog_252 | Bet-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7134 | 7871 |
| ABD63652.1 | DQ394806_p18 | unknown | phrog_3109 | unknown function | unknown function | 1 | 11063 | 11302 |
| ABD63693.1 | DQ394806_p58 | holin | phrog_881 | holin | lysis | 1 | 35187 | 35411 |
| ABD63672.1 | DQ394806_p38 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19183 | 20544 |
| ABD63680.1 | DQ394806_p45 | unknown | phrog_348 | minor head protein | head and packaging | 1 | 24348 | 24659 |
| ABD63649.1 | DQ394806_p15 | replisome organizer | phrog_5708 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9167 | 9949 |
| ABD63666.1 | DQ394806_p32 | unknown | phrog_13719 | unknown function | unknown function | 1 | 15662 | 15841 |
| ABD63676.1 | DQ394806_p41 | unknown | phrog_918 | unknown function | unknown function | 1 | 21877 | 22146 |
| ABD63643.1 | DQ394806_p8 | unknown | phrog_823 | unknown function | unknown function | 1 | 5623 | 5958 |
| ABD63642.1 | DQ394806_p7 | unknown | phrog_373 | anti-repressor | transcription regulation | 1 | 4894 | 5610 |
| ABD63683.1 | DQ394806_p48 | major tail protein | phrog_238 | major tail protein | tail | 1 | 25379 | 25876 |
| ABD63689.1 | DQ394806_p54 | unknown | phrog_8913 | minor head protein | head and packaging | 1 | 32461 | 33429 |
| ABD63636.1 | DQ394806_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 502 | 1581 |
| ABD63665.1 | DQ394806_p31 | unknown | phrog_8817 | unknown function | unknown function | 1 | 15483 | 15665 |
| ABD63667.1 | DQ394806_p33 | unknown | phrog_22390 | unknown function | unknown function | 1 | 15979 | 16443 |
| ABD63685.1 | DQ394806_p50 | unknown | phrog_441 | tail assembly chaperone | tail | 1 | 26426 | 26695 |
| ABD63670.1 | DQ394806_p36 | terminase subunit 1 | phrog_51 | terminase small subunit | head and packaging | 1 | 17391 | 17801 |
| ABD63675.1 | DQ394806_p40 | unknown | phrog_20139 | unknown function | unknown function | 1 | 21639 | 21848 |
| ABD63658.1 | DQ394806_p24 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 12808 | 13227 |
| ABD63687.1 | DQ394806_p52 | unknown | phrog_33 | distal tail protein Dit | tail | 1 | 28934 | 29695 |
| ABD63671.1 | DQ394806_p37 | terminase subunit 2 | phrog_38 | terminase large subunit | head and packaging | 1 | 17794 | 19182 |
| ABD63686.1 | DQ394806_p51 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 26711 | 28924 |
| ABD63650.1 | DQ394806_p16 | unknown | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9949 | 10674 |
| ABD63692.1 | DQ394806_p57 | unknown | phrog_6453 | unknown function | unknown function | 1 | 34895 | 35197 |
| ABD63657.1 | DQ394806_p23 | unknown | phrog_121 | unknown function | unknown function | 1 | 12098 | 12811 |
| ABD63688.1 | DQ394806_p53 | anti-receptor protein | phrog_1067 | minor head protein | head and packaging | 1 | 29722 | 32448 |
| ABD63645.1 | DQ394806_p11 | unknown | phrog_5450 | unknown function | unknown function | 1 | 6590 | 6826 |
| ABD63648.1 | DQ394806_p14 | unknown | phrog_674 | unknown function | unknown function | 1 | 7846 | 8940 |
| ABD63695.1 | DQ394806_p60 | unknown | phrog_26180 | unknown function | unknown function | -1 | 36738 | 36941 |
| ABD63669.1 | DQ394806_p35 | activator of late transcription | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 16691 | 17113 |
| ABD63641.1 | DQ394806_p6 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4643 | 4867 |
| ABD63694.1 | DQ394806_p59 | lysin | phrog_291 | endolysin | lysis | 1 | 35408 | 36697 |
| ABD63690.1 | DQ394806_p55 | unknown | phrog_5983 | tail protein | tail | 1 | 33380 | 34291 |
| ABD63660.1 | DQ394806_p26 | unknown | phrog_1494 | unknown function | unknown function | 1 | 13573 | 13770 |
| ABD63655.1 | DQ394806_p21 | unknown | phrog_7240 | unknown function | unknown function | 1 | 11811 | 12017 |
| ABD63681.1 | DQ394806_p46 | structural protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 24656 | 24982 |
| ABD63662.1 | DQ394806_p28 | unknown | phrog_1071 | DNA methyltransferase | other | 1 | 14112 | 14804 |
| ABD63664.1 | DQ394806_p30 | unknown | phrog_2670 | unknown function | unknown function | 1 | 15066 | 15302 |