Genomic map of Lactococcus phage ul36.k1 (DQ394806)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
DQ394806
Definition
Lactococcus phage ul36.k1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
37131
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
35.7
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ABD63668.1 DQ394806_p34 unknown phrog_26874 unknown function unknown function 1 16440 16613
ABD63684.1 DQ394806_p49 unknown phrog_183 tail chaperone protein tail 1 25992 26342
ABD63682.1 DQ394806_p47 unknown phrog_176 tail terminator connector 1 24979 25368
ABD63638.1 DQ394806_p3 unknown phrog_17949 unknown function unknown function -1 2118 3185
ABD63673.1 DQ394806_p39 minor capsid protein phrog_115 minor head protein head and packaging 1 20548 21588
ABD63640.1 DQ394806_p5 cI-like repressor phrog_8 transcriptional regulator transcription regulation -1 3843 4370
ABD63639.1 DQ394806_p4 unknown phrog_87 metallo-protease other -1 3246 3833
ABD63637.1 DQ394806_p2 unknown phrog_7115 unknown function unknown function -1 1701 2075
ABD63663.1 DQ394806_p29 unknown phrog_7406 unknown function unknown function 1 14851 15069
ABD63677.1 DQ394806_p42 scaffolding protein phrog_2932 head scaffolding protein head and packaging 1 22271 22867
ABD63659.1 DQ394806_p25 unknown phrog_6209 unknown function unknown function 1 13230 13586
ABD63653.1 DQ394806_p19 unknown phrog_5080 unknown function unknown function 1 11413 11619
ABD63678.1 DQ394806_p43 major capsid protein phrog_840 major head protein head and packaging 1 22885 23748
ABD63679.1 DQ394806_p44 unknown phrog_132 head-tail adaptor connector 1 24019 24351
ABD63646.1 DQ394806_p12 unknown phrog_4416 transcriptional regulator transcription regulation 1 6857 7030
ABL67433.1 DQ394806_p9 unknown phrog_7263 unknown function unknown function 1 6021 6254
ABD63691.1 DQ394806_p56 base plate protein phrog_35784 baseplate protein tail 1 34310 34807
ABD63656.1 DQ394806_p22 unknown phrog_5602 unknown function unknown function 1 12010 12162
ABD63651.1 DQ394806_p17 RusA-like resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10671 11060
ABD63654.1 DQ394806_p20 unknown phrog_7446 unknown function unknown function 1 11628 11798
ABD63644.1 DQ394806_p10 unknown phrog_6258 unknown function unknown function -1 6209 6487
ABD63661.1 DQ394806_p27 unknown phrog_3808 unknown function unknown function 1 13763 14125
ABD63647.1 DQ394806_p13 sak phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7134 7871
ABD63652.1 DQ394806_p18 unknown phrog_3109 unknown function unknown function 1 11063 11302
ABD63693.1 DQ394806_p58 holin phrog_881 holin lysis 1 35187 35411
ABD63672.1 DQ394806_p38 portal protein phrog_64 portal protein head and packaging 1 19183 20544
ABD63680.1 DQ394806_p45 unknown phrog_348 minor head protein head and packaging 1 24348 24659
ABD63649.1 DQ394806_p15 replisome organizer phrog_5708 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 9167 9949
ABD63666.1 DQ394806_p32 unknown phrog_13719 unknown function unknown function 1 15662 15841
ABD63676.1 DQ394806_p41 unknown phrog_918 unknown function unknown function 1 21877 22146
ABD63643.1 DQ394806_p8 unknown phrog_823 unknown function unknown function 1 5623 5958
ABD63642.1 DQ394806_p7 unknown phrog_373 anti-repressor transcription regulation 1 4894 5610
ABD63683.1 DQ394806_p48 major tail protein phrog_238 major tail protein tail 1 25379 25876
ABD63689.1 DQ394806_p54 unknown phrog_8913 minor head protein head and packaging 1 32461 33429
ABD63636.1 DQ394806_p1 integrase phrog_1 integrase integration and excision -1 502 1581
ABD63665.1 DQ394806_p31 unknown phrog_8817 unknown function unknown function 1 15483 15665
ABD63667.1 DQ394806_p33 unknown phrog_22390 unknown function unknown function 1 15979 16443
ABD63685.1 DQ394806_p50 unknown phrog_441 tail assembly chaperone tail 1 26426 26695
ABD63670.1 DQ394806_p36 terminase subunit 1 phrog_51 terminase small subunit head and packaging 1 17391 17801
ABD63675.1 DQ394806_p40 unknown phrog_20139 unknown function unknown function 1 21639 21848
ABD63658.1 DQ394806_p24 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 12808 13227
ABD63687.1 DQ394806_p52 unknown phrog_33 distal tail protein Dit tail 1 28934 29695
ABD63671.1 DQ394806_p37 terminase subunit 2 phrog_38 terminase large subunit head and packaging 1 17794 19182
ABD63686.1 DQ394806_p51 tape measure protein phrog_58 tail length tape measure protein tail 1 26711 28924
ABD63650.1 DQ394806_p16 unknown phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 9949 10674
ABD63692.1 DQ394806_p57 unknown phrog_6453 unknown function unknown function 1 34895 35197
ABD63657.1 DQ394806_p23 unknown phrog_121 unknown function unknown function 1 12098 12811
ABD63688.1 DQ394806_p53 anti-receptor protein phrog_1067 minor head protein head and packaging 1 29722 32448
ABD63645.1 DQ394806_p11 unknown phrog_5450 unknown function unknown function 1 6590 6826
ABD63648.1 DQ394806_p14 unknown phrog_674 unknown function unknown function 1 7846 8940
ABD63695.1 DQ394806_p60 unknown phrog_26180 unknown function unknown function -1 36738 36941
ABD63669.1 DQ394806_p35 activator of late transcription phrog_2198 Alt-like transcription activator transcription regulation 1 16691 17113
ABD63641.1 DQ394806_p6 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 4643 4867
ABD63694.1 DQ394806_p59 lysin phrog_291 endolysin lysis 1 35408 36697
ABD63690.1 DQ394806_p55 unknown phrog_5983 tail protein tail 1 33380 34291
ABD63660.1 DQ394806_p26 unknown phrog_1494 unknown function unknown function 1 13573 13770
ABD63655.1 DQ394806_p21 unknown phrog_7240 unknown function unknown function 1 11811 12017
ABD63681.1 DQ394806_p46 structural protein phrog_5 tail completion or Neck1 protein connector 1 24656 24982
ABD63662.1 DQ394806_p28 unknown phrog_1071 DNA methyltransferase other 1 14112 14804
ABD63664.1 DQ394806_p30 unknown phrog_2670 unknown function unknown function 1 15066 15302